Experiment set3S662 for Escherichia coli ECOR38

Compare to:

Bas61

200 most important genes:

  gene name fitness t score description  
HEPCGN_00595 cusF -5.3 -1.7 Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF compare
HEPCGN_16680 zapG -4.8 -3.0 Z-ring associated protein ZapG compare
HEPCGN_02315 -4.7 -1.5 MarR family transcriptional regulator compare
HEPCGN_00255 -4.6 -1.4 hypothetical protein compare
HEPCGN_02900 -4.1 -1.3 Type I toxin-antitoxin system Ibs family toxin compare
HEPCGN_12110 tuf -3.8 -1.2 elongation factor Tu compare
HEPCGN_00885 lipB -3.8 -2.6 lipoyl(octanoyl) transferase LipB compare
HEPCGN_03670 -3.7 -2.0 Putative bacterial toxin ydaT compare
HEPCGN_20780 hscA -3.3 -2.2 Fe-S protein assembly chaperone HscA compare
HEPCGN_01010 ubiF -3.2 -1.7 3-demethoxyubiquinol 3-hydroxylase compare
HEPCGN_12350 metJ -3.0 -1.7 met regulon transcriptional regulator MetJ compare
HEPCGN_26960 -3.0 -0.9 Putative DNA-invertase compare
HEPCGN_21995 pta -3.0 -4.5 phosphate acetyltransferase compare
HEPCGN_17495 Ile2_trna -3.0 -1.3 tRNA-Ile2(cat) compare
HEPCGN_11080 cbtA -2.8 -1.2 type IV toxin-antitoxin system toxin CbtA compare
HEPCGN_01120 seqA -2.8 -1.9 replication initiation negative regulator SeqA compare
HEPCGN_05340 chbR -2.7 -2.6 transcriptional regulator ChbR compare
HEPCGN_08475 aceF -2.6 -2.1 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase compare
HEPCGN_16670 degS -2.6 -1.8 outer membrane-stress sensor serine endopeptidase DegS compare
HEPCGN_22000 ackA -2.5 -3.4 acetate kinase compare
HEPCGN_20250 ratA -2.4 -2.2 type II toxin-antitoxin system toxin RatA compare
HEPCGN_08460 acnB -2.4 -4.8 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
HEPCGN_23880 yceD -2.3 -3.1 23S rRNA accumulation protein YceD compare
HEPCGN_05030 yeaR -2.3 -1.6 Uncharacterized protein YeaR compare
HEPCGN_12445 yiiR -2.2 -2.5 Uncharacterized protein YiiR compare
HEPCGN_22075 nuoH -2.2 -1.6 NADH-quinone oxidoreductase subunit NuoH compare
HEPCGN_08815 surA -2.2 -4.3 peptidylprolyl isomerase SurA compare
HEPCGN_08480 aceE -2.1 -4.7 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
HEPCGN_24100 -2.1 -1.9 host cell division inhibitor Icd-like protein compare
HEPCGN_21365 crr -2.1 -2.3 PTS glucose transporter subunit IIA compare
HEPCGN_20770 iscA -2.1 -1.9 iron-sulfur cluster assembly protein IscA compare
HEPCGN_08060 yaeP -2.1 -2.0 YaeP family protein compare
HEPCGN_14530 -2.1 -2.5 O-antigen ligase domain-containing protein compare
HEPCGN_25340 -2.0 -1.8 hypothetical protein compare
HEPCGN_14540 rfaF -1.9 -1.9 ADP-heptose--LPS heptosyltransferase RfaF compare
HEPCGN_24875 ychF -1.9 -1.8 redox-regulated ATPase YchF compare
HEPCGN_14240 -1.8 -1.3 IS3 family transposase compare
HEPCGN_05770 purR -1.8 -2.7 HTH-type transcriptional repressor PurR compare
HEPCGN_07140 yajC -1.8 -1.2 preprotein translocase subunit YajC compare
HEPCGN_18880 lysS -1.8 -4.0 lysine--tRNA ligase compare
HEPCGN_19900 recA -1.7 -2.9 recombinase RecA compare
HEPCGN_13675 tnaC -1.7 -1.1 tryptophanase leader peptide compare
HEPCGN_11085 -1.7 -2.8 toxin compare
HEPCGN_02010 ybjH -1.7 -1.0 Uncharacterized protein YbjH compare
HEPCGN_24695 ycgN -1.7 -1.6 YcgN family cysteine cluster protein compare
HEPCGN_13320 rep -1.7 -3.2 DNA helicase Rep compare
HEPCGN_09895 -1.7 -0.9 Transposase compare
HEPCGN_26870 -1.7 -1.6 PTS cellobiose transporter subunit IIC compare
HEPCGN_06015 manA -1.6 -1.6 mannose-6-phosphate isomerase compare
HEPCGN_06395 -1.6 -0.9 Lambda prophage-derived head-to-tail joining protein W compare
HEPCGN_12475 pfkA -1.6 -3.3 6-phosphofructokinase compare
HEPCGN_02305 -1.6 -1.8 hypothetical protein compare
HEPCGN_03690 -1.6 -2.1 Tellurite resistance protein TehB compare
HEPCGN_10840 tetR(B -1.5 -4.1 tetracycline resistance transcriptional repressor TetR(B) compare
HEPCGN_26060 ynbE -1.5 -1.2 YdbH family protein compare
HEPCGN_18620 speB -1.5 -2.8 agmatinase compare
HEPCGN_25600 cysB -1.5 -1.3 HTH-type transcriptional regulator CysB compare
HEPCGN_12790 -1.5 -0.6 hypothetical protein compare
HEPCGN_14320 frwB -1.5 -2.0 PTS fructose transporter subunit IIB compare
HEPCGN_20545 lepA -1.5 -4.5 translation elongation factor 4 compare
HEPCGN_13500 mnmG -1.4 -4.9 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
HEPCGN_05480 nlpC -1.4 -1.2 putative endopeptidase NlpC compare
HEPCGN_21370 ptsI -1.4 -2.9 phosphoenolpyruvate-protein phosphotransferase PtsI compare
HEPCGN_05560 -1.4 -1.4 hypothetical protein compare
HEPCGN_06340 -1.4 -0.9 hypothetical protein compare
HEPCGN_04030 fliO -1.4 -0.8 flagellar type III secretion system protein FliO compare
HEPCGN_21870 usg -1.4 -3.4 aspartate-semialdehyde dehydrogenase compare
HEPCGN_22930 trxB -1.3 -2.3 thioredoxin-disulfide reductase compare
HEPCGN_11880 -1.3 -1.7 hypothetical protein compare
HEPCGN_25595 -1.3 -2.4 type I DNA topoisomerase compare
HEPCGN_00215 -1.3 -1.2 DNA-binding protein compare
HEPCGN_14965 -1.3 -1.4 hypothetical protein compare
HEPCGN_16130 yheO -1.3 -3.5 Uncharacterized protein YheO compare
HEPCGN_02935 ibsA -1.3 -2.0 Small toxic protein IbsA compare
HEPCGN_13680 -1.3 -1.8 tRNA modification GTPase MnmE compare
HEPCGN_18120 neuA -1.3 -2.4 N-acylneuraminate cytidylyltransferase compare
HEPCGN_11135 yjdJ -1.3 -1.4 Uncharacterized protein YjdJ compare
HEPCGN_07450 cynT -1.3 -1.9 carbonic anhydrase CynT compare
HEPCGN_17050 -1.2 -1.5 protease compare
HEPCGN_11785 -1.2 -3.2 phage tail protein I compare
HEPCGN_01690 moaE -1.2 -1.2 molybdopterin synthase catalytic subunit MoaE compare
HEPCGN_20125 -1.2 -0.7 hypothetical protein compare
HEPCGN_00860 crcB -1.2 -4.6 fluoride efflux transporter CrcB compare
HEPCGN_04405 -1.2 -0.6 DUF4754 domain-containing protein compare
HEPCGN_25175 -1.2 -0.8 DUF1482 domain-containing protein compare
HEPCGN_03685 -1.2 -2.1 SMEK domain-containing protein compare
HEPCGN_04740 zwf -1.2 -2.8 glucose-6-phosphate dehydrogenase compare
HEPCGN_20505 srmB -1.2 -4.4 ATP-dependent RNA helicase SrmB compare
HEPCGN_06950 clpP -1.1 -2.8 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
HEPCGN_14415 pyrL -1.1 -0.7 Putative PyrE leader peptide compare
HEPCGN_10845 tet(B -1.1 -4.1 tetracycline efflux MFS transporter Tet(B) compare
HEPCGN_26450 osmC -1.1 -1.5 peroxiredoxin OsmC compare
HEPCGN_24555 iclR -1.1 -3.1 IclR family transcriptional regulator compare
HEPCGN_01575 acrZ -1.1 -1.3 multidrug efflux pump accessory protein AcrZ compare
HEPCGN_16490 yhdU -1.1 -0.8 Inner membrane protein YhdU compare
HEPCGN_19710 -1.1 -2.3 hypothetical protein compare
HEPCGN_16345 trkA -1.1 -2.7 Trk system potassium transporter TrkA compare
HEPCGN_10115 relB -1.1 -1.8 type II toxin-antitoxin system RelB/DinJ family antitoxin compare
HEPCGN_26580 -1.1 -1.1 fimbria/pilus periplasmic chaperone compare
HEPCGN_18130 neuE -1.1 -2.0 polysialic acid biosynthesis protein compare
HEPCGN_26710 spoIVCA -1.1 -1.6 DNA-invertase compare
HEPCGN_24410 gpX -1.1 -1.4 Tail protein X, putative compare
HEPCGN_26825 yneK -1.0 -1.2 putative protein YneK compare
HEPCGN_22470 apbE -1.0 -2.8 FAD:protein FMN transferase ApbE compare
HEPCGN_16870 mlaC -1.0 -3.1 phospholipid-binding protein MlaC compare
HEPCGN_07060 pgpA -1.0 -1.6 phosphatidylglycerophosphatase A compare
HEPCGN_15415 ptsH -1.0 -1.1 HPr family phosphocarrier protein compare
HEPCGN_26380 espR1 -1.0 -0.8 Type III secretion system effector espR1 compare
HEPCGN_06945 clpX -1.0 -3.3 ATP-dependent protease ATP-binding subunit ClpX compare
HEPCGN_15355 pitA -1.0 -4.1 inorganic phosphate transporter PitA compare
HEPCGN_06205 -1.0 -0.7 DUF5051 domain-containing protein compare
HEPCGN_08755 -1.0 -1.1 hypothetical protein compare
HEPCGN_01180 ybfA -1.0 -2.0 Uncharacterized protein YbfA compare
HEPCGN_18670 cysA -1.0 -1.3 ABC transporter ATP-binding protein compare
HEPCGN_00430 -1.0 -2.3 Uncharacterized protein api44 compare
HEPCGN_14750 sgbU -1.0 -1.3 Putative L-ribulose-5-phosphate 3-epimerase SgbU compare
HEPCGN_26180 -1.0 -1.3 Ribosomal-protein-serine N-acetyltransferase compare
HEPCGN_27080 -1.0 -0.9 DNA packaging protein from bacteriophage origin compare
HEPCGN_09630 fimB -1.0 -2.1 type 1 fimbria switch DNA invertase FimB compare
HEPCGN_20420 yfiS -1.0 -1.0 Protein YfiS compare
HEPCGN_23670 -1.0 -1.3 Uncharacterized protein YmdA compare
HEPCGN_05295 spy -1.0 -1.0 ATP-independent periplasmic protein-refolding chaperone Spy compare
HEPCGN_11775 -0.9 -1.3 baseplate protein compare
HEPCGN_13600 pstA -0.9 -1.5 phosphate ABC transporter permease PstA compare
HEPCGN_01785 ybiJ -0.9 -1.8 DUF1471 domain-containing protein compare
HEPCGN_09760 lpxM -0.9 -1.3 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
HEPCGN_26420 -0.9 -1.2 Killer protein compare
HEPCGN_18310 -0.9 -1.2 TetR/AcrR family transcriptional regulator compare
HEPCGN_12260 pflC -0.9 -1.6 [formate-C-acetyltransferase]-activating enzyme compare
HEPCGN_18550 yggU -0.9 -1.7 DUF167 domain-containing protein compare
HEPCGN_01445 ybgC -0.9 -1.6 tol-pal system-associated acyl-CoA thioesterase compare
HEPCGN_06615 cnoX -0.9 -2.0 chaperedoxin compare
HEPCGN_25210 -0.9 -3.0 Cro/Cl family transcriptional regulator compare
HEPCGN_18630 tkt -0.9 -1.6 transketolase compare
HEPCGN_24590 -0.9 -0.7 hypothetical protein compare
HEPCGN_07375 yaiL -0.9 -2.1 Uncharacterized protein YaiL compare
HEPCGN_14375 spoT -0.9 -1.4 bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase compare
HEPCGN_05580 aroD -0.9 -1.5 3-dehydroquinate dehydratase compare
HEPCGN_27400 -0.9 -1.1 transcriptional regulator compare
HEPCGN_00245 -0.9 -0.8 Phage tail protein compare
HEPCGN_25635 pgpB -0.9 -2.2 phosphatidylglycerophosphatase B compare
HEPCGN_20255 rnfH -0.9 -1.8 RnfH family protein compare
HEPCGN_16835 kdsC -0.9 -1.3 3-deoxy-manno-octulosonate-8-phosphatase KdsC compare
HEPCGN_16655 argR -0.9 -3.4 transcriptional regulator ArgR compare
HEPCGN_02295 -0.9 -2.3 Ead/Ea22-like protein compare
HEPCGN_00170 -0.9 -4.3 peptidyl-arginine deiminase compare
HEPCGN_00385 -0.8 -2.0 host cell division inhibitor Icd-like protein compare
HEPCGN_13595 pstC -0.8 -1.6 phosphate ABC transporter permease PstC compare
HEPCGN_23985 ycfP -0.8 -1.9 alpha/beta hydrolase YcfP compare
HEPCGN_25400 -0.8 -1.4 DNA-packaging protein FI compare
HEPCGN_18115 neuB -0.8 -1.3 N-acylneuraminate-9-phosphate synthase compare
HEPCGN_06330 cspF -0.8 -0.7 Cold shock-like protein CspF compare
HEPCGN_12620 yiiE -0.8 -1.0 Uncharacterized protein YiiE compare
HEPCGN_17025 yrbN -0.8 -0.8 Uncharacterized protein YrbN compare
HEPCGN_24345 -0.8 -1.7 Protein TonB compare
HEPCGN_01965 -0.8 -1.1 addiction module toxin RelE compare
HEPCGN_06935 lon_P403L -0.8 -2.1 Lon protease compare
HEPCGN_05660 sufE -0.8 -1.0 cysteine desulfuration protein SufE compare
HEPCGN_24840 fepD -0.8 -2.3 iron ABC transporter permease compare
HEPCGN_05635 sufA -0.8 -0.9 Fe-S cluster assembly scaffold SufA compare
HEPCGN_24005 bhsA -0.8 -0.7 multiple stress resistance protein BhsA compare
HEPCGN_26690 -0.8 -1.2 Phage tail sheath protein compare
HEPCGN_23645 cgsD -0.8 -2.1 transcriptional regulator CsgD compare
HEPCGN_12935 ubiE -0.8 -0.6 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE compare
HEPCGN_18750 argP -0.8 -2.2 DNA-binding transcriptional regulator ArgP compare
HEPCGN_18855 fldB -0.8 -2.5 flavodoxin FldB compare
HEPCGN_07615 -0.8 -2.7 hypothetical protein compare
HEPCGN_21875 truA -0.8 -1.5 aspartate-semialdehyde dehydrogenase compare
HEPCGN_20655 glyA -0.8 -1.6 serine hydroxymethyltransferase compare
HEPCGN_25610 -0.8 -1.1 Protein, C-ter, truncated protein compare
HEPCGN_24475 -0.8 -1.2 peptidase compare
HEPCGN_25270 -0.8 -1.7 TrmB family transcriptional regulator compare
HEPCGN_23165 ssuB -0.8 -1.5 aliphatic sulfonates ABC transporter ATP-binding protein compare
HEPCGN_05405 ydiY -0.8 -2.3 Uncharacterized protein YdiY compare
HEPCGN_25970 smrA -0.8 -1.5 DNA endonuclease SmrA compare
HEPCGN_24075 potA -0.8 -2.7 spermidine/putrescine ABC transporter ATP-binding protein PotA compare
HEPCGN_21735 -0.8 -1.6 hypothetical protein compare
HEPCGN_27390 -0.8 -3.9 transcriptional regulator compare
HEPCGN_22885 cspD -0.8 -0.8 cold shock-like protein CspD compare
HEPCGN_23860 rne -0.8 -1.6 ribonuclease E compare
HEPCGN_04575 cheY -0.8 -1.8 chemotaxis regulatory protein CheY compare
HEPCGN_10470 hflC -0.8 -2.1 protease modulator HflC compare
HEPCGN_10550 asd -0.8 -0.6 archaetidylserine decarboxylase compare
HEPCGN_03320 -0.7 -0.7 Antitoxin of the YeeV-YeeU toxin-antitoxin system CP4-44 prophage compare
HEPCGN_15800 -0.7 -3.2 NfuA family Fe-S biogenesis protein compare
HEPCGN_15745 glpD -0.7 -2.5 glycerol-3-phosphate dehydrogenase compare
HEPCGN_12025 thiF -0.7 -1.6 thiazole biosynthesis adenylyltransferase ThiF compare
HEPCGN_09615 fimI -0.7 -1.8 Fimbrin-like protein fimI precursor compare
HEPCGN_13575 lfpB -0.7 -2.3 fimbrial chaperone compare
HEPCGN_09720 -0.7 -1.7 Prophage P4 integrase compare
HEPCGN_26175 ydcH -0.7 -1.0 Uncharacterized protein YdcH compare
HEPCGN_20945 -0.7 -1.3 hypothetical protein compare
HEPCGN_22735 rihB -0.7 -2.3 ribosylpyrimidine nucleosidase compare
HEPCGN_23155 pncB -0.7 -3.0 nicotinate phosphoribosyltransferase compare
HEPCGN_04735 -0.7 -1.9 hypothetical protein compare
HEPCGN_22045 nuoA -0.7 -1.2 NADH-quinone oxidoreductase subunit NuoA compare
HEPCGN_16460 yhdV -0.7 -1.2 Uncharacterized protein YhdV compare
HEPCGN_00370 -0.7 -0.7 Prophage CP4-57 regulatory protein (AlpA) compare
HEPCGN_11635 -0.7 -0.8 sugar ABC transporter compare
HEPCGN_02725 yehC -0.7 -0.8 putative fimbrial chaperone YehC compare


Specific Phenotypes

For 1 genes in this experiment

For phage Phage in Escherichia coli ECOR38

For phage Phage across organisms