Experiment set3S637 for Escherichia coli ECOR38

Compare to:

Bas21

200 most detrimental genes:

  gene name fitness t score description  
HEPCGN_11075 +3.5 7.3 Phage-related protein compare
HEPCGN_26380 espR1 +2.9 5.8 Type III secretion system effector espR1 compare
HEPCGN_11080 cbtA +2.8 4.8 type IV toxin-antitoxin system toxin CbtA compare
HEPCGN_09625 fimE +2.1 1.6 type 1 fimbria switch DNA invertase FimE compare
HEPCGN_04310 +2.0 3.1 phage tail protein compare
HEPCGN_16020 nirD +2.0 2.0 nitrite reductase small subunit NirD compare
HEPCGN_04675 ruvC +2.0 2.3 crossover junction endodeoxyribonuclease RuvC compare
HEPCGN_20060 ymfQ +1.9 2.2 Uncharacterized protein YmfQ compare
HEPCGN_06550 glxR +1.9 2.2 2-hydroxy-3-oxopropionate reductase compare
HEPCGN_00190 +1.9 4.0 DUF2726 domain-containing protein compare
HEPCGN_20870 +1.8 1.4 zinc-ribbons compare
HEPCGN_05670 lpp +1.8 2.8 murein lipoprotein Lpp compare
HEPCGN_08060 yaeP +1.7 1.3 YaeP family protein compare
HEPCGN_19675 rpoS +1.7 5.6 RNA polymerase sigma factor RpoS compare
HEPCGN_25180 +1.7 2.2 Cell division inhibitor compare
HEPCGN_04210 +1.7 1.2 Ogr/Delta-like zinc finger compare
HEPCGN_26545 ydeO +1.6 1.3 acid stress response transcriptional regulator YdeO compare
HEPCGN_20185 ygaP +1.5 2.1 thiosulfate sulfurtransferase YgaP compare
HEPCGN_11980 hupA +1.5 5.1 DNA-binding protein HU-alpha compare
HEPCGN_25340 +1.5 2.8 hypothetical protein compare
HEPCGN_14240 +1.5 2.5 IS3 family transposase compare
HEPCGN_15535 ftsE +1.4 2.0 cell division ATP-binding protein FtsE compare
HEPCGN_22510 napF +1.4 1.5 ferredoxin-type protein NapF compare
HEPCGN_25090 +1.4 2.2 hypothetical protein compare
HEPCGN_06785 apt +1.4 1.8 adenine phosphoribosyltransferase compare
HEPCGN_02975 dcd +1.4 3.1 dCTP deaminase compare
HEPCGN_24645 ymgD +1.4 2.1 Uncharacterized protein YmgD compare
HEPCGN_14415 pyrL +1.4 1.5 Putative PyrE leader peptide compare
HEPCGN_25225 dnaC +1.4 3.1 DNA replication protein DnaC compare
HEPCGN_10855 araC +1.3 1.4 AraC-type DNA-binding domain and AraC-containing proteins compare
HEPCGN_04760 yebG +1.3 1.5 DNA damage-inducible protein YebG compare
HEPCGN_01575 acrZ +1.3 2.8 multidrug efflux pump accessory protein AcrZ compare
HEPCGN_19375 gcvA +1.3 7.0 glycine cleavage system transcriptional regulator GcvA compare
HEPCGN_25895 ycjG +1.3 3.5 L-Ala-D/L-Glu epimerase compare
HEPCGN_13305 trxA +1.3 1.3 thioredoxin TrxA compare
HEPCGN_26610 lsrF +1.3 1.8 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase compare
HEPCGN_25260 rusA +1.3 2.9 Endodeoxyribonuclease RusA compare
HEPCGN_22855 tnp-ISEc81 +1.3 1.1 IS110 family ISEc81 transposase compare
HEPCGN_07495 yahO +1.3 2.6 DUF1471 domain-containing protein compare
HEPCGN_23470 +1.3 1.4 YccE family protein compare
HEPCGN_21180 eutS +1.2 2.8 Bacterial microcompartment shell protein EutS compare
HEPCGN_08720 +1.2 1.5 glucose uptake inhibitor SgrT compare
HEPCGN_17090 dolP +1.2 1.2 division/outer membrane stress-associated lipid-binding lipoprotein compare
HEPCGN_06815 acrA +1.2 4.3 multidrug efflux RND transporter periplasmic adaptor subunit AcrA compare
HEPCGN_20930 +1.2 1.6 DUF5384 domain-containing protein compare
HEPCGN_15230 chuY +1.2 3.7 ChuY compare
HEPCGN_25840 ycjR +1.2 1.2 3-dehydro-D-guloside 4-epimerase compare
HEPCGN_07125 parD +1.2 2.1 Antitoxin ParD compare
HEPCGN_14635 yibL +1.2 1.2 YibL family ribosome-associated protein compare
HEPCGN_25500 yciE +1.2 1.0 Protein YciE compare
HEPCGN_18785 zapA +1.1 2.3 cell division protein ZapA compare
HEPCGN_20755 iscR +1.1 1.6 Fe-S cluster assembly transcriptional regulator IscR compare
HEPCGN_12790 +1.1 0.8 hypothetical protein compare
HEPCGN_26325 tnp-IS629 +1.1 1.1 IS3 family IS629 transposase compare
HEPCGN_10180 chpB +1.1 2.3 type II toxin-antitoxin system ChpB family toxin compare
HEPCGN_19470 yqcA +1.1 3.3 flavodoxin compare
HEPCGN_23970 lpoB +1.1 4.0 penicillin-binding protein activator LpoB compare
HEPCGN_24800 ldcA +1.1 3.0 muramoyltetrapeptide carboxypeptidase compare
HEPCGN_03510 ycdB +1.1 1.4 putative transcriptional regulatory protein YcdB compare
HEPCGN_20525 rseA +1.1 2.8 anti-sigma-E factor RseA compare
HEPCGN_27375 repA +1.1 2.0 incFII family plasmid replication initiator RepA compare
HEPCGN_14190 +1.1 3.0 ethanolamine utilization protein EutN compare
HEPCGN_08910 caiD +1.0 2.4 crotonobetainyl-CoA hydratase compare
HEPCGN_25255 +1.0 3.1 DUF968 domain-containing protein compare
HEPCGN_15540 ftsX +1.0 3.1 permease-like cell division protein FtsX compare
HEPCGN_15440 mngR +1.0 1.0 GntR family transcriptional regulator compare
HEPCGN_23800 flgN +1.0 1.5 flagella biosynthesis chaperone FlgN compare
HEPCGN_14050 +1.0 1.6 DUF945 domain-containing protein compare
HEPCGN_02400 +1.0 1.8 hypothetical protein compare
HEPCGN_05985 hdhA +1.0 1.8 7-alpha-hydroxysteroid dehydrogenase compare
HEPCGN_21200 pta +1.0 1.6 phosphate acetyltransferase compare
HEPCGN_04765 yebF +1.0 1.2 Protein YebF compare
HEPCGN_22690 yeiW +1.0 1.7 UPF0153 protein YeiW compare
HEPCGN_07155 acpH +1.0 2.3 ACP phosphodiesterase compare
HEPCGN_25390 +1.0 1.7 head decoration protein compare
HEPCGN_20205 ygaM +1.0 1.8 Uncharacterized protein YgaM compare
HEPCGN_25425 +0.9 1.7 phage minor tail protein G compare
HEPCGN_24410 gpX +0.9 1.3 Tail protein X, putative compare
HEPCGN_13125 xerC +0.9 2.3 tyrosine recombinase XerC compare
HEPCGN_26730 +0.9 1.4 baseplate assembly protein compare
HEPCGN_24760 +0.9 2.6 hypothetical protein compare
HEPCGN_03190 hisIE +0.9 2.4 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
HEPCGN_10245 hxlR +0.9 1.8 transcriptional regulator compare
HEPCGN_26345 nhoA +0.9 2.3 N-hydroxyarylamine O-acetyltransferase compare
HEPCGN_04280 +0.9 1.3 phage virion morphogenesis protein compare
HEPCGN_19655 truD +0.9 2.4 tRNA pseudouridine(13) synthase TruD compare
HEPCGN_04005 dsrB +0.9 1.9 protein DsrB compare
HEPCGN_03415 +0.9 1.0 DDE-Tnp-IS66-C domain-containing protein compare
HEPCGN_05910 nth +0.9 2.1 endonuclease III compare
HEPCGN_11565 +0.9 1.4 DUF2713 domain-containing protein compare
HEPCGN_06555 hyi +0.9 1.6 hydroxypyruvate isomerase compare
HEPCGN_16705 sspA +0.9 3.6 stringent starvation protein A compare
HEPCGN_18555 yggT +0.9 2.2 osmotic shock tolerance protein YggT compare
HEPCGN_16615 yhdP +0.9 5.9 AsmA2 domain-containing protein YhdP conserved
HEPCGN_26680 +0.9 0.8 phage tail assembly protein compare
HEPCGN_04680 +0.9 1.1 Protein compare
HEPCGN_00045 +0.9 1.2 Arginyl-tRNA synthetase compare
HEPCGN_00915 rlmH +0.9 1.0 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
HEPCGN_20835 rodZ +0.9 2.4 cytoskeleton protein RodZ compare
HEPCGN_23670 +0.9 1.0 Uncharacterized protein YmdA compare
HEPCGN_18395 +0.9 0.9 carbohydrate-binding protein compare
HEPCGN_09810 fecC +0.9 1.9 iron-dicitrate ABC transporter permease FecC compare
HEPCGN_06165 ynfC +0.9 1.7 YnfC family lipoprotein compare
HEPCGN_17075 yhbO +0.9 1.3 protein/nucleic acid deglycase compare
HEPCGN_24045 cobB +0.9 2.0 NAD-dependent protein deacylase compare
HEPCGN_19695 ecdD +0.8 2.8 Protein EcdD compare
HEPCGN_05800 grxD +0.8 1.4 monothiol glutaredoxin 4 compare
HEPCGN_06310 +0.8 1.4 antitermination protein compare
HEPCGN_07785 phoE +0.8 2.3 phosphoporin PhoE compare
HEPCGN_02555 +0.8 2.1 DUF3168 domain-containing protein compare
HEPCGN_05860 slyA +0.8 1.1 transcriptional regulator SlyA compare
HEPCGN_00630 ybdJ +0.8 1.5 Uncharacterized protein YbdJ compare
HEPCGN_26620 tam +0.8 1.5 trans-aconitate 2-methyltransferase compare
HEPCGN_15155 gadB +0.8 1.1 glutamate decarboxylase compare
HEPCGN_04665 +0.8 2.0 putative transcriptional regulatory protein YebC compare
HEPCGN_03020 wcaB +0.8 2.1 colanic acid biosynthesis acetyltransferase WcaB compare
HEPCGN_24990 +0.8 2.9 hypothetical protein compare
HEPCGN_24465 +0.8 1.5 DUF2190 domain-containing protein compare
HEPCGN_05720 ydhR +0.8 1.4 monooxygenase compare
HEPCGN_22600 yejM +0.8 1.5 LPS biosynthesis-modulating metalloenzyme YejM compare
HEPCGN_26125 gap +0.8 2.8 type I glyceraldehyde-3-phosphate dehydrogenase compare
HEPCGN_23660 csgA +0.8 1.1 curlin major subunit CsgA compare
HEPCGN_05350 chbG +0.8 1.8 chitin disaccharide deacetylase compare
HEPCGN_04905 mntP +0.8 0.6 manganese efflux pump MntP compare
HEPCGN_03625 +0.8 1.6 DUF4224 domain-containing protein compare
HEPCGN_25910 ynaI +0.8 2.3 low conductance mechanosensitive channel YnaI compare
HEPCGN_03925 hprR +0.8 1.8 response regulator transcription factor HprR compare
HEPCGN_10430 +0.8 1.4 DUF2491 domain-containing protein compare
HEPCGN_26550 safA +0.8 0.8 two-component system connector SafA compare
HEPCGN_21415 +0.8 1.8 Nucleoside-specific channel-forming protein, Tsx compare
HEPCGN_05210 ynjH +0.8 2.1 Uncharacterized protein YnjH compare
HEPCGN_16795 npr +0.8 1.6 PTS phosphocarrier protein NPr compare
HEPCGN_18860 xerD +0.8 2.1 site-specific tyrosine recombinase XerD compare
HEPCGN_12560 frvA +0.8 0.5 PTS fructose transporter subunit IIA compare
HEPCGN_25215 +0.8 1.3 Rha family transcriptional regulator compare
HEPCGN_06455 ybcI +0.8 1.6 Inner membrane protein YbcI compare
HEPCGN_05130 yeaC +0.8 1.2 Uncharacterized protein YeaC compare
HEPCGN_10600 sugE +0.8 1.5 quaternary ammonium compound efflux SMR transporter SugE compare
HEPCGN_04830 yebW +0.8 1.0 Uncharacterized protein YebW compare
HEPCGN_23555 efeB +0.7 1.9 iron uptake transporter deferrochelatase/peroxidase subunit compare
HEPCGN_16740 nanK +0.7 2.6 N-acetylmannosamine kinase compare
HEPCGN_17680 tolC +0.7 4.9 outer membrane channel protein TolC compare
HEPCGN_15330 rsmJ +0.7 1.7 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ compare
HEPCGN_23285 ompA +0.7 3.9 outer membrane protein A compare
HEPCGN_09165 yjjX +0.7 1.2 inosine/xanthosine triphosphatase compare
HEPCGN_22535 napH +0.7 1.5 quinol dehydrogenase ferredoxin subunit NapH compare
HEPCGN_10405 yjfN +0.7 2.2 protease activator YjfN compare
HEPCGN_02940 terY +0.7 2.2 Uncharacterized protein YegL compare
HEPCGN_01685 moaD +0.7 0.7 molybdopterin synthase sulfur carrier subunit compare
HEPCGN_20565 recO +0.7 2.0 DNA repair protein RecO compare
HEPCGN_20045 yciW +0.7 1.8 alkylhydroperoxidase compare
HEPCGN_08755 +0.7 1.2 hypothetical protein compare
HEPCGN_27380 repL +0.7 1.3 Positive regulator of RepFIC repA1 expression compare
HEPCGN_06820 acrB +0.7 4.7 efflux RND transporter permease AcrB compare
HEPCGN_10880 +0.7 0.8 Truncated transposase compare
HEPCGN_23705 yceK +0.7 1.5 YceK/YidQ family lipoprotein compare
HEPCGN_25970 smrA +0.7 1.2 DNA endonuclease SmrA compare
HEPCGN_15235 chuX +0.7 2.6 putative heme-binding protein ChuX compare
HEPCGN_08840 +0.7 1.0 Toxin CcdB compare
HEPCGN_21625 yfdE +0.7 2.7 CoA:oxalate CoA-transferase compare
HEPCGN_06725 ybaK +0.7 1.1 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK compare
HEPCGN_12415 glpF +0.7 2.7 glycerol uptake facilitator protein GlpF compare
HEPCGN_21355 pdxK +0.7 2.0 pyridoxine/pyridoxal/pyridoxamine kinase compare
HEPCGN_26420 +0.7 1.2 Killer protein compare
HEPCGN_23415 gnsA +0.7 0.9 Protein GnsA compare
HEPCGN_25485 +0.7 0.6 Ybl63 compare
HEPCGN_04020 fliQ +0.7 2.0 flagellar biosynthesis protein FliQ compare
HEPCGN_14220 +0.7 2.8 winged helix family transcriptional regulator compare
HEPCGN_10065 pyrI +0.7 1.7 aspartate carbamoyltransferase regulatory subunit compare
HEPCGN_24480 gpG +0.7 1.7 phage virion morphogenesis protein compare
HEPCGN_08075 yaeR +0.7 2.0 VOC family protein compare
HEPCGN_04415 +0.7 1.5 DUF4761 domain-containing protein compare
HEPCGN_25525 trpCF +0.7 2.0 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
HEPCGN_16885 sfsB +0.7 0.8 DNA-binding transcriptional regulator SfsB compare
HEPCGN_13435 rbsR +0.7 4.1 ribose operon transcriptional repressor RbsR compare
HEPCGN_19885 srlA +0.7 2.8 PTS glucitol/sorbitol transporter subunit IIC compare
HEPCGN_11685 pgi +0.7 3.5 glucose-6-phosphate isomerase compare
HEPCGN_22450 rcsB +0.7 2.8 transcriptional regulator RcsB compare
HEPCGN_21010 focB +0.7 2.0 formate transporter FocB compare
HEPCGN_23580 pgaB +0.7 2.1 poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB compare
HEPCGN_04575 cheY +0.7 1.8 chemotaxis regulatory protein CheY compare
HEPCGN_22220 nudI +0.7 2.1 nucleoside triphosphatase NudI compare
HEPCGN_17895 hypA +0.7 1.2 hydrogenase maturation nickel metallochaperone HypA compare
HEPCGN_25805 pspD +0.7 1.1 phage shock protein PspD compare
HEPCGN_24415 +0.7 2.4 Phage P2 GpU compare
HEPCGN_09330 yjjZ +0.7 1.9 Uncharacterized protein YjjZ compare
HEPCGN_14380 rpoZ +0.7 1.8 DNA-directed RNA polymerase subunit omega compare
HEPCGN_14570 envC +0.7 0.9 murein hydrolase activator EnvC compare
HEPCGN_18120 neuA +0.7 1.6 N-acylneuraminate cytidylyltransferase compare
HEPCGN_21975 yfcF +0.7 1.4 glutathione transferase compare
HEPCGN_06095 ydgU +0.7 0.6 Uncharacterized protein YdgU compare
HEPCGN_11220 pmrR +0.7 1.4 Putative membrane protein PmrR compare
HEPCGN_24635 ymgF +0.7 0.9 Inner membrane protein YmgF compare
HEPCGN_03335 +0.7 0.5 restriction endonuclease compare
HEPCGN_04860 proQ +0.6 1.6 RNA chaperone ProQ compare
HEPCGN_24815 ymgE +0.6 1.2 UPF0410 protein YmgE compare
HEPCGN_18170 +0.6 1.3 Protein encoding reversible inactivation of extracellular polysaccharide production compare
HEPCGN_17135 kbaY +0.6 1.4 tagatose-bisphosphate aldolase subunit KbaY compare
HEPCGN_24600 +0.6 0.7 hypothetical protein compare
HEPCGN_06830 tomB +0.6 1.4 Hha toxicity modulator TomB compare


Specific Phenotypes

For 1 genes in this experiment

For phage Phage in Escherichia coli ECOR38

For phage Phage across organisms