Experiment set3S596 for Escherichia coli ECOR38

Compare to:

TP15

200 most important genes:

  gene name fitness t score description  
HEPCGN_16680 zapG -5.0 -2.8 Z-ring associated protein ZapG compare
HEPCGN_02315 -4.8 -1.4 MarR family transcriptional regulator compare
HEPCGN_12110 tuf -4.0 -1.1 elongation factor Tu compare
HEPCGN_12560 frvA -3.7 -1.0 PTS fructose transporter subunit IIA compare
HEPCGN_22075 nuoH -3.6 -2.6 NADH-quinone oxidoreductase subunit NuoH compare
HEPCGN_08815 surA -3.5 -5.6 peptidylprolyl isomerase SurA compare
HEPCGN_01010 ubiF -3.3 -1.6 3-demethoxyubiquinol 3-hydroxylase compare
HEPCGN_12935 ubiE -3.0 -1.7 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE compare
HEPCGN_03695 -2.9 -1.4 Uncharacterized protein YmfE compare
HEPCGN_22000 ackA -2.8 -3.3 acetate kinase compare
HEPCGN_21995 pta -2.8 -4.9 phosphate acetyltransferase compare
HEPCGN_21370 ptsI -2.8 -5.8 phosphoenolpyruvate-protein phosphotransferase PtsI compare
HEPCGN_16670 degS -2.7 -1.9 outer membrane-stress sensor serine endopeptidase DegS compare
HEPCGN_00885 lipB -2.6 -3.0 lipoyl(octanoyl) transferase LipB compare
HEPCGN_04685 yobI -2.4 -0.9 Uncharacterized protein YobI compare
HEPCGN_15945 dam -2.3 -3.1 adenine-specific DNA-methyltransferase compare
HEPCGN_26060 ynbE -2.3 -1.9 YdbH family protein compare
HEPCGN_25720 sapF -2.2 -1.2 peptide ABC transporter ATP-binding protein SapF compare
HEPCGN_25500 yciE -2.2 -0.9 Protein YciE compare
HEPCGN_00460 yjdB -2.1 -1.0 phage tail protein compare
HEPCGN_20250 ratA -2.1 -1.8 type II toxin-antitoxin system toxin RatA compare
HEPCGN_24005 bhsA -2.1 -1.4 multiple stress resistance protein BhsA compare
HEPCGN_03670 -2.0 -1.8 Putative bacterial toxin ydaT compare
HEPCGN_19255 rppH -2.0 -2.2 RNA pyrophosphohydrolase compare
HEPCGN_20780 hscA -2.0 -2.7 Fe-S protein assembly chaperone HscA compare
HEPCGN_08480 aceE -2.0 -5.6 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
HEPCGN_24875 ychF -2.0 -1.7 redox-regulated ATPase YchF compare
HEPCGN_19295 recC -2.0 -6.6 exodeoxyribonuclease V subunit gamma compare
HEPCGN_18630 tkt -1.9 -4.5 transketolase compare
HEPCGN_08460 acnB -1.9 -4.4 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
HEPCGN_16490 yhdU -1.8 -1.0 Inner membrane protein YhdU compare
HEPCGN_14540 rfaF -1.8 -1.8 ADP-heptose--LPS heptosyltransferase RfaF compare
HEPCGN_08475 aceF -1.8 -1.9 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase compare
HEPCGN_12115 Thr_trna -1.7 -1.0 tRNA-Thr(ggt) compare
HEPCGN_03340 -1.7 -0.9 DUF945 domain-containing protein compare
HEPCGN_13700 ysdD -1.7 -1.1 Protein YsdD compare
HEPCGN_21365 crr -1.6 -1.6 PTS glucose transporter subunit IIA compare
HEPCGN_17025 yrbN -1.6 -1.9 Uncharacterized protein YrbN compare
HEPCGN_13675 tnaC -1.6 -1.2 tryptophanase leader peptide compare
HEPCGN_06135 dmsD -1.6 -1.5 Tat proofreading chaperone DmsD compare
HEPCGN_26610 lsrF -1.5 -2.8 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase compare
HEPCGN_04760 yebG -1.5 -0.8 DNA damage-inducible protein YebG compare
HEPCGN_02305 -1.5 -1.7 hypothetical protein compare
HEPCGN_22930 trxB -1.5 -2.3 thioredoxin-disulfide reductase compare
HEPCGN_08835 apaH -1.5 -4.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
HEPCGN_24740 fadR -1.5 -3.1 fatty acid metabolism transcriptional regulator FadR compare
HEPCGN_23880 yceD -1.5 -1.9 23S rRNA accumulation protein YceD compare
HEPCGN_01120 seqA -1.4 -1.9 replication initiation negative regulator SeqA compare
HEPCGN_13605 pstB -1.4 -1.2 phosphate ABC transporter ATP-binding protein PstB compare
HEPCGN_04405 -1.4 -0.7 DUF4754 domain-containing protein compare
HEPCGN_00920 rsfS -1.4 -0.8 ribosome silencing factor compare
HEPCGN_01100 uof -1.4 -0.8 fur leader peptide compare
HEPCGN_20585 shoB -1.4 -0.8 Small toxic protein ShoB compare
HEPCGN_21870 usg -1.4 -2.5 aspartate-semialdehyde dehydrogenase compare
HEPCGN_25505 yciF -1.4 -1.2 Protein YciF compare
HEPCGN_15355 pitA -1.4 -4.3 inorganic phosphate transporter PitA compare
HEPCGN_19785 hycF -1.3 -1.7 formate hydrogenlyase subunit HycF compare
HEPCGN_24830 -1.3 -2.2 SAM-dependent methyltransferase compare
HEPCGN_18130 neuE -1.3 -2.0 polysialic acid biosynthesis protein compare
HEPCGN_03895 -1.3 -0.9 hypothetical protein compare
HEPCGN_20770 iscA -1.3 -1.5 iron-sulfur cluster assembly protein IscA compare
HEPCGN_19305 recB -1.3 -4.3 exodeoxyribonuclease V subunit beta compare
HEPCGN_13680 -1.3 -2.3 tRNA modification GTPase MnmE compare
HEPCGN_13320 rep -1.3 -2.6 DNA helicase Rep compare
HEPCGN_19025 -1.3 -1.4 GhoT/OrtT family toxin compare
HEPCGN_06205 -1.3 -0.8 DUF5051 domain-containing protein compare
HEPCGN_22125 elaD -1.3 -1.5 ElaD/SseL family deubiquitinase compare
HEPCGN_03765 -1.3 -1.5 lysis protein compare
HEPCGN_16460 yhdV -1.3 -1.7 Uncharacterized protein YhdV compare
HEPCGN_26960 -1.2 -0.5 Putative DNA-invertase compare
HEPCGN_13100 corA -1.2 -2.3 magnesium/cobalt transporter CorA compare
HEPCGN_07285 yaiY -1.2 -1.7 Inner membrane protein YaiY compare
HEPCGN_03320 -1.2 -0.9 Antitoxin of the YeeV-YeeU toxin-antitoxin system CP4-44 prophage compare
HEPCGN_20505 srmB -1.2 -4.7 ATP-dependent RNA helicase SrmB compare
HEPCGN_17030 deaD -1.2 -3.2 ATP-dependent RNA helicase DeaD compare
HEPCGN_02410 quuD -1.2 -3.8 antitermination protein QuuD compare
HEPCGN_12620 yiiE -1.2 -1.3 Uncharacterized protein YiiE compare
HEPCGN_08840 -1.2 -1.8 Toxin CcdB compare
HEPCGN_16875 ibaG -1.2 -1.4 BolA family iron metabolism protein IbaG compare
HEPCGN_22510 napF -1.2 -1.5 ferredoxin-type protein NapF compare
HEPCGN_25175 -1.2 -0.8 DUF1482 domain-containing protein compare
HEPCGN_20545 lepA -1.2 -3.8 translation elongation factor 4 compare
HEPCGN_25055 hns -1.2 -1.0 DNA-binding transcriptional regulator H-NS compare
HEPCGN_04595 flhe -1.2 -1.2 flagellar protein FlhE compare
HEPCGN_12340 metL -1.2 -6.2 bifunctional aspartate kinase/homoserine dehydrogenase II compare
HEPCGN_20940 yfgG -1.1 -1.3 Uncharacterized protein YfgG compare
HEPCGN_01690 moaE -1.1 -2.0 molybdopterin synthase catalytic subunit MoaE compare
HEPCGN_06325 ynfS -1.1 -1.4 Protein YnfS compare
HEPCGN_24685 ycgL -1.1 -1.9 Protein YcgL compare
HEPCGN_02310 -1.1 -1.0 DUF4752 domain-containing protein compare
HEPCGN_00190 -1.1 -0.7 DUF2726 domain-containing protein compare
HEPCGN_01685 moaD -1.1 -1.6 molybdopterin synthase sulfur carrier subunit compare
HEPCGN_17725 -1.1 -2.2 hypothetical protein compare
HEPCGN_00255 -1.1 -0.5 hypothetical protein compare
HEPCGN_13595 pstC -1.0 -2.8 phosphate ABC transporter permease PstC compare
HEPCGN_26865 lacF -1.0 -0.9 PTS lactose/cellobiose transporter subunit IIA compare
HEPCGN_16345 trkA -1.0 -2.5 Trk system potassium transporter TrkA compare
HEPCGN_06950 clpP -1.0 -2.7 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
HEPCGN_25215 -1.0 -1.1 Rha family transcriptional regulator compare
HEPCGN_00630 ybdJ -1.0 -1.5 Uncharacterized protein YbdJ compare
HEPCGN_16325 yhdN -1.0 -0.7 Uncharacterized protein YhdN compare
HEPCGN_13620 -1.0 -1.4 hypothetical protein compare
HEPCGN_15950 rpe -1.0 -1.4 ribulose-phosphate 3-epimerase compare
HEPCGN_22085 nuoJ -1.0 -2.5 NADH-quinone oxidoreductase subunit J compare
HEPCGN_05565 araC -1.0 -1.0 AraC family transcriptional regulator compare
HEPCGN_14530 -1.0 -1.3 O-antigen ligase domain-containing protein compare
HEPCGN_06785 apt -1.0 -1.2 adenine phosphoribosyltransferase compare
HEPCGN_15800 -1.0 -4.4 NfuA family Fe-S biogenesis protein compare
HEPCGN_09795 -1.0 -1.0 KpLE2 phage-like element compare
HEPCGN_18120 neuA -1.0 -1.0 N-acylneuraminate cytidylyltransferase compare
HEPCGN_04030 fliO -1.0 -0.6 flagellar type III secretion system protein FliO compare
HEPCGN_05660 sufE -1.0 -1.1 cysteine desulfuration protein SufE compare
HEPCGN_11085 -1.0 -1.3 toxin compare
HEPCGN_04350 mraW -1.0 -1.4 DNA methyltransferase compare
HEPCGN_05030 yeaR -0.9 -0.7 Uncharacterized protein YeaR compare
HEPCGN_18310 -0.9 -1.6 TetR/AcrR family transcriptional regulator compare
HEPCGN_12915 tatA -0.9 -0.6 Sec-independent protein translocase subunit TatA compare
HEPCGN_25595 -0.9 -1.7 type I DNA topoisomerase compare
HEPCGN_17625 glgS -0.9 -2.2 cell surface composition regulator GlgS compare
HEPCGN_18315 -0.9 -1.4 Outer membrane protein compare
HEPCGN_18580 gshB -0.9 -3.8 glutathione synthase compare
HEPCGN_18300 -0.9 -0.7 IS2 repressor protein compare
HEPCGN_14525 -0.9 -2.0 beta1,3-glucosyltransferase compare
HEPCGN_00215 -0.9 -0.9 DNA-binding protein compare
HEPCGN_16350 rsmB -0.9 -4.0 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB compare
HEPCGN_18750 argP -0.9 -3.7 DNA-binding transcriptional regulator ArgP compare
HEPCGN_24835 fepC -0.9 -1.9 ABC transporter ATP-binding protein compare
HEPCGN_16655 argR -0.9 -3.1 transcriptional regulator ArgR compare
HEPCGN_12350 metJ -0.9 -1.0 met regulon transcriptional regulator MetJ compare
HEPCGN_24505 -0.9 -1.0 Conserved hypothetical phage-related protein compare
HEPCGN_06095 ydgU -0.9 -0.6 Uncharacterized protein YdgU compare
HEPCGN_15745 glpD -0.9 -3.7 glycerol-3-phosphate dehydrogenase compare
HEPCGN_20125 -0.9 -0.6 hypothetical protein compare
HEPCGN_04750 kdgA -0.9 -0.8 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
HEPCGN_12445 yiiR -0.9 -1.4 Uncharacterized protein YiiR compare
HEPCGN_06945 clpX -0.9 -3.5 ATP-dependent protease ATP-binding subunit ClpX compare
HEPCGN_04035 fliN -0.9 -0.9 flagellar motor switch protein FliN compare
HEPCGN_02980 asmA -0.9 -2.2 outer membrane assembly protein AsmA compare
HEPCGN_26305 yncG -0.9 -2.5 Uncharacterized GST-like protein YncG compare
HEPCGN_14705 yiaW -0.9 -1.3 Inner membrane protein YiaW compare
HEPCGN_26330 -0.9 -1.8 hypothetical protein compare
HEPCGN_24580 -0.9 -1.2 host-nuclease inhibitor protein Gam compare
HEPCGN_16770 arcB -0.9 -1.8 aerobic respiration two-component sensor histidine kinase ArcB compare
HEPCGN_21585 ypdK -0.9 -1.3 membrane protein YpdK compare
HEPCGN_02295 -0.9 -1.8 Ead/Ea22-like protein compare
HEPCGN_05060 yeaO -0.8 -0.7 Uncharacterized protein YeaO compare
HEPCGN_00350 -0.8 -1.1 hypothetical protein compare
HEPCGN_00595 cusF -0.8 -0.7 Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF compare
HEPCGN_13160 cyaY -0.8 -2.1 iron donor protein CyaY compare
HEPCGN_19505 mazE -0.8 -1.7 type II toxin-antitoxin system antitoxin MazE compare
HEPCGN_12475 pfkA -0.8 -2.4 6-phosphofructokinase compare
HEPCGN_11240 yjdM -0.8 -1.9 Protein YjdM compare
HEPCGN_02215 yohC -0.8 -2.3 Inner membrane protein YohC compare
HEPCGN_25045 rssB -0.8 -3.3 two-component system response regulator RssB compare
HEPCGN_18880 lysS -0.8 -2.5 lysine--tRNA ligase compare
HEPCGN_16385 aroE -0.8 -2.6 shikimate dehydrogenase compare
HEPCGN_03405 -0.8 -1.8 cytoplasmic protein compare
HEPCGN_19900 recA -0.8 -1.4 recombinase RecA compare
HEPCGN_08755 -0.8 -0.9 hypothetical protein compare
HEPCGN_21820 aroC -0.8 -1.3 chorismate synthase compare
HEPCGN_20375 rluD -0.8 -3.5 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
HEPCGN_22855 tnp-ISEc81 -0.8 -0.8 IS110 family ISEc81 transposase compare
HEPCGN_18855 fldB -0.8 -2.6 flavodoxin FldB compare
HEPCGN_15625 -0.8 -1.8 Immunity protein 35 compare
HEPCGN_01200 ybgI -0.8 -1.5 radiation resistance protein YbgI compare
HEPCGN_23600 -0.8 -1.8 GGDEF domain-containing protein compare
HEPCGN_21945 rpnB -0.8 -2.5 recombination-promoting nuclease RpnB compare
HEPCGN_25330 -0.8 -0.7 Putative endopeptidase compare
HEPCGN_16520 yhdT -0.8 -1.8 Uncharacterized membrane protein YhdT compare
HEPCGN_10460 purA -0.8 -2.6 adenylosuccinate synthase compare
HEPCGN_03310 yeeW -0.8 -1.5 Protein YeeW compare
HEPCGN_02725 yehC -0.8 -0.8 putative fimbrial chaperone YehC compare
HEPCGN_14065 -0.8 -2.0 transcriptional regulator compare
HEPCGN_00065 essD -0.8 -1.9 phage lysis protein EssD compare
HEPCGN_26655 -0.8 -1.5 Transcriptional regulator YneJ compare
HEPCGN_03795 -0.8 -0.9 hypothetical protein compare
HEPCGN_00205 -0.8 -2.2 hypothetical protein compare
HEPCGN_16130 yheO -0.8 -2.3 Uncharacterized protein YheO compare
HEPCGN_17760 mqsA -0.8 -0.9 type II toxin-antitoxin system antitoxin MqsA compare
HEPCGN_10055 -0.8 -2.1 ArgR family transcriptional regulator compare
HEPCGN_13495 mioC -0.8 -2.8 FMN-binding protein MioC compare
HEPCGN_25490 -0.8 -2.0 Rhodococcus equi virulence-associated protein compare
HEPCGN_19715 ygbA -0.8 -1.5 nitrous oxide-stimulated promoter family protein compare
HEPCGN_03295 yeeA -0.7 -2.4 Inner membrane protein YeeA compare
HEPCGN_04395 -0.7 -1.3 Phage protein compare
HEPCGN_23860 rne -0.7 -1.1 ribonuclease E compare
HEPCGN_24930 sirB1 -0.7 -2.7 invasion regulator SirB1 compare
HEPCGN_13165 cyaA -0.7 -3.9 class I adenylate cyclase compare
HEPCGN_01070 nagB -0.7 -2.3 glucosamine-6-phosphate deaminase compare
HEPCGN_09630 fimB -0.7 -1.4 type 1 fimbria switch DNA invertase FimB compare
HEPCGN_22060 nuoE -0.7 -1.1 NADH-quinone oxidoreductase subunit NuoE compare
HEPCGN_17835 exbD -0.7 -1.7 TonB system transport protein ExbD compare
HEPCGN_09595 fimG -0.7 -0.8 type 1 fimbria minor subunit FimG compare
HEPCGN_18220 -0.7 -0.9 hypothetical protein compare
HEPCGN_05340 chbR -0.7 -1.0 transcriptional regulator ChbR compare
HEPCGN_12815 yihD -0.7 -1.3 Protein YihD compare
HEPCGN_14095 -0.7 -3.2 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase compare
HEPCGN_04445 xerD -0.7 -2.5 integrase compare
HEPCGN_24160 -0.7 -0.9 phage head closure protein compare
HEPCGN_03705 -0.7 -0.5 protein hokC compare


Specific Phenotypes

For 1 genes in this experiment

For phage Phage in Escherichia coli ECOR38

For phage Phage across organisms