Experiment set3S479 for Variovorax sp. SCN45

Community=Kojac gum; Passage=4

Group: complex community
Media: + Community=Kojac gum; Passage=4
Culturing: Variovorax_SCN45_ML2
By: Tom Hessler on 23-Oct-24

Specific Phenotypes

For 8 genes in this experiment

For complex community Community=Kojac gum; Passage=4 in Variovorax sp. SCN45

For complex community Community=Kojac gum; Passage=4 across organisms

SEED Subsystems

Subsystem	#Specific
Polyhydroxybutyrate metabolism	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Fatty acid biosynthesis
• Lysine degradation
• Histidine metabolism
• Tyrosine metabolism
• Phenylalanine metabolism
• Lipopolysaccharide biosynthesis
• Glycerophospholipid metabolism
• Ether lipid metabolism
• Glycosphingolipid biosynthesis - ganglio series
• 1- and 2-Methylnaphthalene degradation
• Benzoate degradation via CoA ligation
• Ethylbenzene degradation
• Butanoate metabolism
• Limonene and pinene degradation
• Diterpenoid biosynthesis
• Carotenoid biosynthesis - General
• Anthocyanin biosynthesis
• Alkaloid biosynthesis I
• Alkaloid biosynthesis II
• Biosynthesis of unsaturated fatty acids
• Biosynthesis of type II polyketide backbone
• Biosynthesis of terpenoids and steroids

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
polyhydroxybutanoate biosynthesis	3	3	1