Experiment set3S434 for Escherichia coli ECRC98

GB_JK32

Group: phage
Media: + Phage (10 MOI)
Culturing: Ecoli_ECRC98_ML1, 48 well microplate, Aerobic, at 25 (C), shaken=double orbital, continuous, 205cpm
By: Lucas on 6/17/2025

Specific Phenotypes

For 4 genes in this experiment

For phage Phage in Escherichia coli ECRC98

For phage Phage across organisms

SEED Subsystems

Subsystem	#Specific
Murein hydrolase regulation and cell death	2
DNA-replication	1
Transcription factors bacterial	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Purine metabolism
• Lipopolysaccharide biosynthesis
• Glyoxylate and dicarboxylate metabolism
• Methane metabolism
• Folate biosynthesis

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
nitrate reduction III (dissimilatory)	2	2	1
formate to trimethylamine N-oxide electron transfer	2	2	1
formate to dimethyl sulfoxide electron transfer	2	2	1
formate to nitrite electron transfer	3	2	1