Experiment set3S379 for Escherichia coli ECOR27

Compare to:

Bas38

200 most important genes:

  gene name fitness t score description  
NOLOHH_06715 wecA -7.2 -18.6 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
NOLOHH_15730 -6.9 -6.7 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
NOLOHH_07565 rfaL -6.6 -7.9 O-antigen ligase RfaL compare
NOLOHH_23510 fur -3.8 -3.7 ferric iron uptake transcriptional regulator compare
NOLOHH_23145 galE -3.8 -8.0 UDP-glucose 4-epimerase GalE compare
NOLOHH_07560 rfaB -3.4 -5.8 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
NOLOHH_02390 gmhB -3.3 -2.2 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase compare
NOLOHH_06530 corA -3.0 -5.8 magnesium/cobalt transporter CorA compare
NOLOHH_04525 miaA -3.0 -2.4 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
NOLOHH_11365 rpiA -3.0 -3.5 ribose-5-phosphate isomerase RpiA compare
NOLOHH_10640 ygiN -2.9 -3.0 putative quinol monooxygenase YgiN compare
NOLOHH_13720 eutN -2.7 -2.1 ethanolamine utilization microcompartment protein EutN compare
NOLOHH_07555 rfaJ -2.7 -3.5 glucosyltransferase compare
NOLOHH_06675 wzxE -2.6 -4.5 lipid III flippase WzxE compare
NOLOHH_12800 ratA -2.5 -2.4 type II toxin-antitoxin system toxin RatA compare
NOLOHH_11230 tkt -2.4 -2.5 transketolase compare
NOLOHH_20895 nudJ -2.4 -1.7 phosphatase NudJ compare
NOLOHH_21130 yceD -2.4 -3.2 23S rRNA accumulation protein YceD compare
NOLOHH_02710 yadN -2.3 -1.6 Uncharacterized fimbrial-like protein YadN compare
NOLOHH_02845 aceE -2.3 -1.6 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_13075 lepA -2.3 -5.6 translation elongation factor 4 compare
NOLOHH_18060 rsxD -2.3 -4.6 electron transport complex subunit RsxD compare
NOLOHH_19195 mcbR -2.2 -1.8 colanic acid/biofilm transcriptional regulator McbR compare
NOLOHH_20915 phoP -2.2 -2.7 two-component system response regulator PhoP compare
NOLOHH_21205 flgB -2.1 -1.5 flagellar basal body rod protein FlgB compare
NOLOHH_03375 dnaJ -2.1 -1.9 molecular chaperone DnaJ compare
NOLOHH_16865 yebG -2.0 -1.4 DNA damage-inducible protein YebG compare
NOLOHH_18350 -2.0 -2.3 Putative prophage protein compare
NOLOHH_13300 iscA -2.0 -2.0 iron-sulfur cluster assembly protein IscA compare
NOLOHH_14780 apbE -2.0 -3.2 FAD:protein FMN transferase ApbE compare
NOLOHH_19485 paaB -2.0 -2.0 1,2-phenylacetyl-CoA epoxidase subunit B compare
NOLOHH_19280 sutR -1.9 -1.6 DNA-binding transcriptional regulator SutR compare
NOLOHH_01270 clpP -1.9 -3.4 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_08605 yrhA -1.9 -1.3 protein YrhA compare
NOLOHH_05225 dgkA -1.8 -2.6 diacylglycerol kinase compare
NOLOHH_12545 recA -1.8 -2.7 recombinase RecA compare
NOLOHH_07535 rfaG -1.8 -4.9 Lipopolysaccharide core biosynthesis protein RfaG compare
NOLOHH_05965 pfkA -1.8 -5.9 6-phosphofructokinase compare
NOLOHH_09695 arcB -1.7 -4.3 aerobic respiration two-component sensor histidine kinase ArcB compare
NOLOHH_13310 hscA -1.7 -3.2 Fe-S protein assembly chaperone HscA compare
NOLOHH_16845 zwf -1.7 -1.8 glucose-6-phosphate dehydrogenase compare
NOLOHH_11480 sdhE -1.7 -1.2 FAD assembly factor SdhE compare
NOLOHH_12805 rnfH -1.7 -2.2 RnfH family protein compare
NOLOHH_24225 traJ -1.7 -1.4 conjugal transfer transcriptional regulator TraJ compare
NOLOHH_22195 cspD -1.6 -2.8 cold shock-like protein CspD compare
NOLOHH_04005 Leu_trna -1.6 -1.9 tRNA-Leu(caa) compare
NOLOHH_24475 -1.6 -1.8 pilus assembly protein compare
NOLOHH_17440 astE -1.6 -1.5 succinylglutamate desuccinylase compare
NOLOHH_06920 mnmG -1.6 -5.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_06665 wzyE -1.6 -5.0 ECA oligosaccharide polymerase compare
NOLOHH_14330 cvpA -1.6 -1.5 colicin V production protein compare
NOLOHH_19875 dbpA -1.6 -2.6 ATP-dependent RNA helicase DbpA compare
NOLOHH_23480 pgm -1.5 -3.3 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_20500 narI -1.5 -2.2 respiratory nitrate reductase subunit gamma compare
NOLOHH_17675 ydiT -1.5 -2.0 Ferredoxin-like protein YdiT compare
NOLOHH_17270 yeaC -1.5 -2.0 Uncharacterized protein YeaC compare
NOLOHH_00445 -1.5 -2.2 peptidyl-arginine deiminase compare
NOLOHH_02825 acnB -1.5 -2.2 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
NOLOHH_04655 epmB -1.5 -1.7 EF-P beta-lysylation protein EpmB compare
NOLOHH_09730 ptsN -1.5 -3.1 PTS IIA-like nitrogen regulatory protein PtsN compare
NOLOHH_15920 eutP -1.4 -2.3 propanediol utilization protein compare
NOLOHH_01380 pgpA -1.4 -1.7 phosphatidylglycerophosphatase A compare
NOLOHH_14305 truA -1.4 -3.5 tRNA pseudouridine(38-40) synthase TruA compare
NOLOHH_16175 zinT -1.4 -1.7 metal-binding protein ZinT compare
NOLOHH_23250 tolR -1.4 -2.7 colicin uptake protein TolR compare
NOLOHH_02180 yncI -1.4 -1.8 ISAs1 family transposase compare
NOLOHH_11515 lysS -1.4 -2.2 lysine--tRNA ligase compare
NOLOHH_15975 pduJ -1.4 -1.1 propanediol utilization microcompartment protein PduJ compare
NOLOHH_23245 tolA -1.4 -3.6 cell envelope integrity protein TolA compare
NOLOHH_17665 ppsA -1.3 -2.6 phosphoenolpyruvate synthase compare
NOLOHH_03190 apaH -1.3 -5.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_17690 ydiQ -1.3 -1.9 electron transfer flavoprotein compare
NOLOHH_13070 rseC -1.3 -3.1 SoxR-reducing system protein RseC compare
NOLOHH_20115 puuC -1.3 -2.8 aldehyde dehydrogenase PuuC compare
NOLOHH_23310 odhB -1.3 -1.7 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
NOLOHH_02630 yadW -1.3 -1.4 Protein YadW compare
NOLOHH_18070 rsxB -1.3 -1.5 electron transport complex subunit RsxB compare
NOLOHH_00385 -1.2 -0.9 hypothetical protein compare
NOLOHH_19635 -1.2 -1.2 hypothetical protein compare
NOLOHH_22965 -1.2 -1.2 XRE family transcriptional regulator compare
NOLOHH_20015 ycjW -1.2 -2.0 Uncharacterized HTH-type transcriptional regulator YcjW compare
NOLOHH_20440 ychT -1.2 -1.3 Protein YchT compare
NOLOHH_14120 emrK -1.2 -3.1 multidrug efflux MFS transporter periplasmic adaptor subunit EmrK compare
NOLOHH_10610 tolC -1.2 -3.1 outer membrane channel protein TolC compare
NOLOHH_15220 yohO -1.2 -1.3 protein YohO compare
NOLOHH_17395 ynjA -1.2 -1.6 Uncharacterized protein YnjA compare
NOLOHH_24570 -1.2 -1.8 Alpha/beta hydrolase compare
NOLOHH_16620 yecT -1.2 -1.2 Uncharacterized protein YecT compare
NOLOHH_23315 sucA -1.2 -1.2 2-oxoglutarate dehydrogenase E1 component compare
NOLOHH_13035 srmB -1.2 -5.2 ATP-dependent RNA helicase SrmB compare
NOLOHH_14500 nuoJ -1.2 -3.8 NADH-quinone oxidoreductase subunit J compare
NOLOHH_21380 cgsE -1.2 -1.0 curli production assembly/transport protein CsgE compare
NOLOHH_14470 nuoC -1.2 -4.2 NADH-quinone oxidoreductase subunit C/D compare
NOLOHH_23790 crcB -1.2 -2.0 fluoride efflux transporter CrcB compare
NOLOHH_18855 fimA -1.1 -1.1 type 1 fimbrial major subunit FimA compare
NOLOHH_07575 rfaF -1.1 -1.9 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_03170 surA -1.1 -3.1 peptidylprolyl isomerase SurA compare
NOLOHH_14475 nuoE -1.1 -1.4 NADH-quinone oxidoreductase subunit NuoE compare
NOLOHH_00525 -1.1 -1.0 Tail tube terminator protein compare
NOLOHH_20295 rluB -1.1 -3.5 23S rRNA pseudouridine(2605) synthase RluB compare
NOLOHH_06550 xerC -1.1 -1.8 tyrosine recombinase XerC compare
NOLOHH_14160 Arg_trna -1.1 -2.3 tRNA-Arg(cct) compare
NOLOHH_18960 ddpA -1.1 -1.5 putative D,D-dipeptide-binding periplasmic protein DdpA compare
NOLOHH_04460 -1.1 -1.9 DUF2491 domain-containing protein compare
NOLOHH_01255 lon_P403L -1.0 -3.7 Lon protease compare
NOLOHH_06585 cyaY -1.0 -3.5 iron donor protein CyaY compare
NOLOHH_17400 ydjZ -1.0 -1.4 TVP38/TMEM64 family inner membrane protein YdjZ compare
NOLOHH_14300 usg -1.0 -2.1 aspartate-semialdehyde dehydrogenase compare
NOLOHH_16180 msrQ -1.0 -1.7 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ compare
NOLOHH_21305 mdtG -1.0 -1.6 multidrug efflux MFS transporter MdtG compare
NOLOHH_14910 yejM -1.0 -1.5 LPS biosynthesis-modulating metalloenzyme YejM compare
NOLOHH_19285 ydcO -1.0 -2.7 BenE family transporter YdcO compare
NOLOHH_18050 rsxE -1.0 -1.7 electron transport complex subunit RsxE compare
NOLOHH_21880 elfD -1.0 -1.5 putative fimbrial chaperone protein ElfD compare
NOLOHH_02315 rnhA -1.0 -2.4 ribonuclease HI compare
NOLOHH_14495 nuoI -1.0 -1.4 NADH-quinone oxidoreductase subunit NuoI compare
NOLOHH_19260 hicB -1.0 -1.2 type II toxin-antitoxin system antitoxin HicB compare
NOLOHH_09645 nanR -1.0 -2.4 transcriptional regulator NanR compare
NOLOHH_07540 rfaP -0.9 -3.2 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_24040 ybdJ -0.9 -1.3 Uncharacterized protein YbdJ compare
NOLOHH_13410 guaB -0.9 -3.9 IMP dehydrogenase compare
NOLOHH_06250 hemN -0.9 -5.0 oxygen-independent coproporphyrinogen III oxidase compare
NOLOHH_19710 -0.9 -1.2 transcriptional regulator compare
NOLOHH_13055 rseA -0.9 -1.5 anti-sigma-E factor RseA compare
NOLOHH_15925 pduU -0.9 -2.1 propanediol utilization microcompartment protein PduU compare
NOLOHH_24795 trbI -0.9 -1.5 type-F conjugative transfer system protein TrbI compare
NOLOHH_11425 ubiI -0.9 -1.2 FAD-dependent 2-octaprenylphenol hydroxylase compare
NOLOHH_09940 pnp -0.9 -5.2 polyribonucleotide nucleotidyltransferase compare
NOLOHH_12165 -0.9 -1.1 LemA family compare
NOLOHH_22400 ybjG -0.9 -2.7 undecaprenyl-diphosphate phosphatase compare
NOLOHH_16290 fliQ -0.9 -1.7 flagellar biosynthesis protein FliQ compare
NOLOHH_23255 tolQ -0.9 -1.3 Tol-Pal system protein TolQ compare
NOLOHH_13865 crr -0.9 -1.0 PTS glucose transporter subunit IIA compare
NOLOHH_02485 rnhB -0.8 -1.7 ribonuclease HII compare
NOLOHH_18065 rsxC -0.8 -2.6 electron transport complex subunit RsxC compare
NOLOHH_19040 adhP -0.8 -1.8 alcohol dehydrogenase AdhP compare
NOLOHH_06385 fre -0.8 -4.4 NAD(P)H-flavin reductase compare
NOLOHH_16855 kdgA -0.8 -1.1 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
NOLOHH_06730 trxA -0.8 -1.6 thioredoxin TrxA compare
NOLOHH_21095 fabF -0.8 -1.9 beta-ketoacyl-ACP synthase II compare
NOLOHH_20785 ycgL -0.8 -1.1 Protein YcgL compare
NOLOHH_04420 ulaR -0.8 -3.5 HTH-type transcriptional regulator UlaR compare
NOLOHH_08375 pitA -0.8 -2.1 inorganic phosphate transporter PitA compare
NOLOHH_17480 chbC -0.8 -1.7 PTS N,N'-diacetylchitobiose transporter subunit IIC compare
NOLOHH_17330 ydjA -0.8 -0.7 NAD(P)H nitroreductase compare
NOLOHH_18155 fumC -0.8 -1.0 class II fumarate hydratase compare
NOLOHH_18115 hdhA -0.8 -1.0 7-alpha-hydroxysteroid dehydrogenase compare
NOLOHH_06110 -0.8 -1.3 hypothetical protein compare
NOLOHH_17185 dgcP -0.8 -2.3 diguanylate cyclase DgcP compare
NOLOHH_06300 dsbA -0.8 -2.2 thiol:disulfide interchange protein DsbA compare
NOLOHH_24255 yubO -0.8 -3.3 Uncharacterized protein YubO compare
NOLOHH_18295 speG -0.8 -1.4 spermidine N1-acetyltransferase compare
NOLOHH_23860 rnk -0.8 -1.5 nucleoside diphosphate kinase regulator compare
NOLOHH_18375 -0.8 -2.1 Ybl78 compare
NOLOHH_18265 -0.8 -2.2 dimethylsulfoxide reductase compare
NOLOHH_09835 obgE -0.8 -0.9 GTPase ObgE compare
NOLOHH_19480 paaC -0.8 -1.4 phenylacetate-CoA oxygenase subunit PaaC compare
NOLOHH_24755 -0.8 -1.0 toxin ArtA compare
NOLOHH_04165 treC -0.8 -2.5 alpha,alpha-phosphotrehalase compare
NOLOHH_23485 seqA -0.8 -1.0 replication initiation negative regulator SeqA compare
NOLOHH_05695 sthA -0.8 -3.3 Si-specific NAD(P)(+) transhydrogenase compare
NOLOHH_21335 mdoC -0.8 -1.6 glucans biosynthesis protein MdoC compare
NOLOHH_22530 mntS -0.8 -1.3 manganase accumulation protein MntS compare
NOLOHH_17430 astD -0.8 -1.6 succinylglutamate-semialdehyde dehydrogenase compare
NOLOHH_19820 sieB -0.8 -1.5 Superinfection exclusion protein B compare
NOLOHH_22335 ybjN -0.8 -1.9 Uncharacterized protein YbjN compare
NOLOHH_23955 fepB -0.8 -2.5 ferrienterobactin ABC transporter periplasmic binding protein compare
NOLOHH_21285 yceJ -0.8 -2.3 Cytochrome b561-like protein compare
NOLOHH_16360 yedF -0.7 -1.1 sulfurtransferase-like selenium metabolism protein YedF compare
NOLOHH_18420 quuQ -0.7 -2.0 Prophage antitermination Q-like protein QuuQ compare
NOLOHH_19095 narW -0.7 -0.6 nitrate reductase molybdenum cofactor assembly chaperone compare
NOLOHH_09725 rapZ -0.7 -3.2 RNase adapter RapZ compare
NOLOHH_15290 -0.7 -1.8 Uncharacterized protein YehK compare
NOLOHH_00170 -0.7 -1.2 hypothetical protein compare
NOLOHH_07230 yidQ -0.7 -2.8 Uncharacterized protein YidQ compare
NOLOHH_24370 -0.7 -1.9 hypothetical protein compare
NOLOHH_10220 yhaL -0.7 -1.1 Uncharacterized protein YhaL compare
NOLOHH_23660 rihA -0.7 -2.5 pyrimidine-specific ribonucleoside hydrolase RihA compare
NOLOHH_00790 fimA -0.7 -1.0 type 1 fimbrial major subunit FimA compare
NOLOHH_12770 -0.7 -0.8 ATP-binding protein compare
NOLOHH_04765 yjdJ -0.7 -1.9 Uncharacterized protein YjdJ compare
NOLOHH_03020 rsmH -0.7 -1.3 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
NOLOHH_20520 narK -0.7 -1.8 nitrate transporter NarK compare
NOLOHH_14480 nuoF -0.7 -3.1 NADH-quinone oxidoreductase subunit NuoF compare
NOLOHH_11415 pepP -0.7 -2.7 Xaa-Pro aminopeptidase compare
NOLOHH_00760 fimZ -0.7 -1.6 fimbria biosynthesis transcriptional regulator FimZ compare
NOLOHH_21090 pabC -0.7 -0.9 aminodeoxychorismate lyase compare
NOLOHH_14340 ubiX -0.7 -1.5 flavin prenyltransferase UbiX compare
NOLOHH_18215 mdtI -0.7 -0.6 multidrug/spermidine efflux SMR transporter subunit MdtI compare
NOLOHH_00405 hipB -0.7 -0.8 XRE family transcriptional regulator compare
NOLOHH_18825 lsrR -0.7 -1.7 transcriptional regulator LsrR compare
NOLOHH_19900 dgcM -0.7 -1.8 diguanylate cyclase DgcM compare
NOLOHH_15980 -0.7 -1.8 propanediol dehydratase compare
NOLOHH_17535 hxpB -0.7 -1.8 hexitol phosphatase HxpB compare
NOLOHH_06220 typA -0.7 -5.1 ribosome-dependent GTPase TypA compare
NOLOHH_07550 rfaY -0.7 -1.9 lipopolysaccharide core heptose(II) kinase RfaY compare
NOLOHH_15545 mdtA -0.7 -2.1 multidrug efflux RND transporter subunit MdtA compare
NOLOHH_03075 leuD -0.7 -1.3 3-isopropylmalate dehydratase small subunit compare
NOLOHH_09590 argR -0.7 -1.6 transcriptional regulator ArgR compare
NOLOHH_09955 deaD -0.7 -2.0 ATP-dependent RNA helicase DeaD compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms