Experiment set3S371 for Phocaeicola dorei CL03T12C01

Compare to:

N-Acetyl-D-Glucosamine 2.5 mg/ml carbon source

200 most important genes:

  gene name fitness t score description  
ABI39_RS21065 -7.0 -8.2 indole-3-glycerol phosphate synthase TrpC compare
ABI39_RS04685 -6.7 -6.3 acetylglutamate kinase compare
ABI39_RS02970 -6.6 -10.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABI39_RS04695 -6.5 -7.9 shikimate kinase compare
ABI39_RS21060 -6.2 -9.9 anthranilate phosphoribosyltransferase compare
ABI39_RS10510 -6.2 -10.0 prephenate dehydratase compare
ABI39_RS04245 -6.0 -2.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
ABI39_RS02975 -5.8 -11.9 argininosuccinate synthase compare
ABI39_RS07790 -5.7 -8.6 M20 family metallo-hydrolase compare
ABI39_RS16905 -5.7 -13.8 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABI39_RS02980 -5.7 -8.1 N-acetyltransferase compare
ABI39_RS02880 -5.6 -12.0 glutamate 5-kinase compare
ABI39_RS12645 -5.6 -12.7 chorismate synthase compare
ABI39_RS21075 -5.5 -7.0 tryptophan synthase subunit alpha compare
ABI39_RS10495 -5.5 -9.9 prephenate dehydrogenase compare
ABI39_RS12715 -5.4 -10.9 dihydroxy-acid dehydratase compare
ABI39_RS02875 -5.3 -11.7 glutamate-5-semialdehyde dehydrogenase compare
ABI39_RS21045 -5.3 -6.3 tryptophan synthase subunit beta compare
ABI39_RS10505 -5.3 -12.0 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
ABI39_RS19935 -5.3 -11.2 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
ABI39_RS10500 -5.3 -5.1 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type II compare
ABI39_RS02870 -5.3 -8.3 acetylornithine carbamoyltransferase compare
ABI39_RS07095 -5.0 -17.6 argininosuccinate lyase compare
ABI39_RS12720 -5.0 -14.4 biosynthetic-type acetolactate synthase large subunit compare
ABI39_RS19985 -5.0 -2.9 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS11830 -4.9 -4.8 ATP phosphoribosyltransferase compare
ABI39_RS19925 -4.8 -9.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABI39_RS12735 -4.8 -10.7 ketol-acid reductoisomerase compare
ABI39_RS00205 -4.7 -3.2 phosphoglucosamine mutase compare
ABI39_RS12665 -4.7 -9.4 shikimate dehydrogenase compare
ABI39_RS10430 -4.6 -16.9 bifunctional aspartate kinase/homoserine dehydrogenase I compare
ABI39_RS11845 -4.6 -8.3 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
ABI39_RS11840 -4.6 -6.3 histidinol-phosphate transaminase compare
ABI39_RS02315 -4.6 -9.8 IMP dehydrogenase compare
ABI39_RS06055 -4.5 -8.4 phosphoribosylamine--glycine ligase compare
ABI39_RS19930 -4.4 -5.7 imidazole glycerol phosphate synthase subunit HisF compare
ABI39_RS11835 -4.4 -7.2 histidinol dehydrogenase compare
ABI39_RS10260 -4.3 -9.7 adenylosuccinate synthase compare
ABI39_RS05660 -4.3 -9.8 acetyl-CoA hydrolase/transferase family protein compare
ABI39_RS00475 -4.3 -5.6 phosphoribosylformylglycinamidine cyclo-ligase compare
ABI39_RS10435 -4.2 -13.5 cofactor-independent phosphoglycerate mutase compare
ABI39_RS07005 -4.2 -7.5 type II 3-dehydroquinate dehydratase compare
ABI39_RS10205 -4.2 -5.8 3-isopropylmalate dehydratase small subunit compare
ABI39_RS10215 -4.2 -9.4 3-isopropylmalate dehydrogenase compare
ABI39_RS02960 -4.1 -9.9 pyrroline-5-carboxylate reductase compare
ABI39_RS04795 -4.1 -2.4 M28 family peptidase compare
ABI39_RS19385 -4.0 -3.7 hypothetical protein compare
ABI39_RS21050 -4.0 -7.0 anthranilate synthase component I family protein compare
ABI39_RS10640 -4.0 -12.7 serine dehydratase subunit alpha family protein compare
ABI39_RS00405 -4.0 -24.1 phosphoribosylformylglycinamidine synthase compare
ABI39_RS10440 -4.0 -7.5 threonine synthase compare
ABI39_RS16910 -3.9 -10.7 3-phosphoglycerate dehydrogenase compare
ABI39_RS19950 -3.9 -5.3 diaminopimelate decarboxylase compare
ABI39_RS10200 -3.9 -11.2 3-isopropylmalate dehydratase large subunit compare
ABI39_RS02965 -3.8 -9.7 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme compare
ABI39_RS12675 -3.7 -5.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABI39_RS21350 -3.6 -2.5 aspartate--ammonia ligase compare
ABI39_RS10210 -3.6 -12.2 2-isopropylmalate synthase compare
ABI39_RS10195 -3.6 -8.4 2-isopropylmalate synthase compare
ABI39_RS00770 -3.6 -14.7 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS14560 -3.5 -3.4 aspartate 1-decarboxylase compare
ABI39_RS01415 -3.5 -3.3 branched-chain amino acid aminotransferase compare
ABI39_RS09575 -3.3 -2.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABI39_RS10870 -3.3 -10.6 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD compare
ABI39_RS09845 -3.2 -4.0 (d)CMP kinase compare
ABI39_RS17420 -3.2 -10.2 serine hydroxymethyltransferase compare
ABI39_RS19945 -3.2 -11.5 aspartate kinase compare
ABI39_RS12725 -3.1 -5.2 acetolactate synthase small subunit compare
ABI39_RS06670 -3.1 -12.6 2-oxoacid:acceptor oxidoreductase subunit alpha compare
ABI39_RS04690 -3.0 -11.4 biosynthetic arginine decarboxylase compare
ABI39_RS11940 -3.0 -14.4 saccharopine dehydrogenase family protein compare
ABI39_RS17140 -2.8 -2.7 AAA family ATPase compare
ABI39_RS05450 -2.8 -4.5 redox-regulated ATPase YchF compare
ABI39_RS02500 -2.8 -11.0 pyridoxine 5'-phosphate synthase compare
ABI39_RS06675 -2.8 -8.1 2-oxoacid:ferredoxin oxidoreductase subunit beta compare
ABI39_RS04885 -2.7 -3.7 calcium-translocating P-type ATPase, PMCA-type compare
ABI39_RS08135 -2.7 -2.8 YicC family protein compare
ABI39_RS06250 -2.7 -10.7 4-phosphoerythronate dehydrogenase PdxB compare
ABI39_RS14465 -2.6 -6.2 hypothetical protein compare
ABI39_RS11405 -2.6 -8.5 hypothetical protein compare
ABI39_RS22740 -2.5 -1.7 IS66 family insertion sequence element accessory protein TnpB compare
ABI39_RS02755 -2.5 -2.4 glycosyltransferase compare
ABI39_RS09195 -2.4 -3.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABI39_RS17315 -2.4 -11.8 alpha amylase C-terminal domain-containing protein compare
ABI39_RS14230 -2.4 -12.4 alpha-amylase compare
ABI39_RS12955 -2.4 -6.7 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
ABI39_RS04700 -2.4 -3.4 type I DNA topoisomerase compare
ABI39_RS14225 -2.4 -10.0 glycosyltransferase compare
ABI39_RS01300 -2.4 -9.6 NADP-specific glutamate dehydrogenase compare
ABI39_RS08035 -2.4 -2.8 adenylosuccinate lyase compare
ABI39_RS19920 -2.4 -4.3 imidazole glycerol phosphate synthase subunit HisH compare
ABI39_RS02140 -2.4 -2.3 TetR/AcrR family transcriptional regulator compare
ABI39_RS10650 -2.3 -15.7 AraC family transcriptional regulator compare
ABI39_RS04145 -2.3 -2.2 transcription elongation factor GreA compare
ABI39_RS05175 -2.3 -4.8 4-hydroxy-tetrahydrodipicolinate reductase compare
ABI39_RS06380 -2.3 -6.6 GH3 auxin-responsive promoter family protein compare
ABI39_RS04860 -2.2 -2.4 HigA family addiction module antidote protein compare
ABI39_RS07090 -2.2 -1.2 hypothetical protein compare
ABI39_RS17160 -2.1 -2.0 VWA domain-containing protein compare
ABI39_RS15265 -2.1 -2.7 crossover junction endodeoxyribonuclease RuvC compare
ABI39_RS04505 -2.0 -6.9 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
ABI39_RS12970 -2.0 -6.6 CDP-alcohol phosphatidyltransferase family protein compare
ABI39_RS15415 -2.0 -4.6 hypothetical protein compare
ABI39_RS17730 -2.0 -8.7 carboxynorspermidine decarboxylase compare
ABI39_RS02355 -1.9 -5.3 ABC transporter ATP-binding protein compare
ABI39_RS00515 -1.9 -2.5 hypothetical protein compare
ABI39_RS14030 -1.9 -3.2 MFS transporter compare
ABI39_RS08185 -1.9 -8.1 hemolysin III family protein compare
ABI39_RS02350 -1.9 -4.7 ABC transporter permease compare
ABI39_RS18910 -1.9 -2.3 preprotein translocase subunit YajC compare
ABI39_RS18745 -1.8 -5.5 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
ABI39_RS17950 -1.8 -2.5 Crp/Fnr family transcriptional regulator compare
ABI39_RS17150 -1.8 -3.9 hypothetical protein compare
ABI39_RS08810 -1.7 -1.5 DUF3876 domain-containing protein compare
ABI39_RS12560 -1.7 -8.2 GGGtGRT protein compare
ABI39_RS16695 -1.6 -4.2 carbon-nitrogen hydrolase compare
ABI39_RS14220 -1.6 -7.4 glycogen debranching enzyme N-terminal domain-containing protein compare
ABI39_RS15410 -1.6 -7.1 DUF4296 domain-containing protein compare
ABI39_RS09855 -1.6 -2.5 polyprenyl synthetase family protein compare
ABI39_RS12965 -1.6 -7.9 hypothetical protein compare
ABI39_RS17320 -1.5 -3.1 YhcH/YjgK/YiaL family protein compare
ABI39_RS06115 -1.5 -7.1 phosphatase PAP2 family protein compare
ABI39_RS09245 -1.5 -9.5 cardiolipin synthase compare
ABI39_RS12565 -1.4 -5.7 hypothetical protein compare
ABI39_RS05280 -1.4 -9.7 S41 family peptidase compare
ABI39_RS17170 -1.4 -2.0 protein BatD compare
ABI39_RS17945 -1.4 -9.9 glutamine synthetase III compare
ABI39_RS12805 -1.4 -2.9 hypothetical protein compare
ABI39_RS12980 -1.4 -2.7 HAD family hydrolase compare
ABI39_RS09850 -1.4 -3.5 energy transducer TonB compare
ABI39_RS17195 -1.3 -5.3 hypothetical protein compare
ABI39_RS04230 -1.3 -4.1 RNA polymerase factor sigma-54 compare
ABI39_RS19470 -1.3 -1.4 hypothetical protein compare
ABI39_RS12960 -1.3 -7.2 NDP-sugar synthase compare
ABI39_RS00760 -1.3 -1.7 YjgP/YjgQ family permease compare
ABI39_RS11170 -1.3 -2.8 hypothetical protein compare
ABI39_RS17175 -1.2 -3.4 tetratricopeptide repeat protein compare
ABI39_RS16245 -1.2 -1.4 DUF3408 domain-containing protein compare
ABI39_RS14715 -1.2 -3.9 RidA family protein compare
ABI39_RS18300 -1.2 -4.6 bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase compare
ABI39_RS21210 -1.2 -8.0 glucosamine-6-phosphate deaminase compare
ABI39_RS18740 -1.2 -4.0 ATP-binding protein compare
ABI39_RS04970 -1.2 -2.7 Holliday junction branch migration DNA helicase RuvB compare
ABI39_RS11560 -1.2 -5.0 DUF4421 domain-containing protein compare
ABI39_RS10415 -1.1 -1.8 DUF1847 domain-containing protein compare
ABI39_RS12730 -1.1 -2.6 acyl-ACP thioesterase compare
ABI39_RS11485 -1.1 -2.6 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
ABI39_RS22925 -1.1 -1.4 smalltalk protein compare
ABI39_RS04730 -1.1 -1.4 Lrp/AsnC ligand binding domain-containing protein compare
ABI39_RS07330 -1.1 -3.0 winged helix-turn-helix transcriptional regulator compare
ABI39_RS06060 -1.1 -4.0 S9 family peptidase compare
ABI39_RS09230 -1.1 -1.1 hypothetical protein compare
ABI39_RS15320 -1.1 -6.4 PorT family protein compare
ABI39_RS11875 -1.1 -3.2 OmpH family outer membrane protein compare
ABI39_RS04280 -1.1 -2.5 DUF4292 domain-containing protein compare
ABI39_RS08175 -1.1 -2.0 anaerobic ribonucleoside-triphosphate reductase activating protein compare
ABI39_RS08480 -1.1 -1.0 histidine kinase compare
ABI39_RS12995 -1.1 -5.9 inositol-3-phosphate synthase compare
ABI39_RS00520 -1.0 -4.7 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABI39_RS13750 -1.0 -3.1 hypothetical protein compare
ABI39_RS12945 -1.0 -3.6 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN compare
ABI39_RS13215 -1.0 -6.7 ATP-dependent DNA helicase RecQ compare
ABI39_RS10110 -1.0 -6.3 S9 family peptidase compare
ABI39_RS10000 -1.0 -6.2 DUF4435 domain-containing protein compare
ABI39_RS17105 -1.0 -2.1 CinA family protein compare
ABI39_RS12150 -1.0 -1.9 hotdog fold thioesterase compare
ABI39_RS16390 -1.0 -3.6 PcfJ family protein compare
ABI39_RS00315 -1.0 -1.8 DUF1573 domain-containing protein compare
ABI39_RS17780 -1.0 -6.3 HesA/MoeB/ThiF family protein compare
ABI39_RS14140 -1.0 -2.5 DUF1573 domain-containing protein compare
ABI39_RS15980 -0.9 -2.3 hypothetical protein compare
ABI39_RS21055 -0.9 -2.7 aminodeoxychorismate/anthranilate synthase component II compare
ABI39_RS02060 -0.9 -3.7 translocation/assembly module TamB domain-containing protein compare
ABI39_RS12770 -0.9 -2.5 hypothetical protein compare
ABI39_RS21200 -0.9 -2.9 MFS transporter compare
ABI39_RS07345 -0.9 -1.0 TM0996/MTH895 family glutaredoxin-like protein compare
ABI39_RS02480 -0.9 -1.4 DJ-1/PfpI family protein compare
ABI39_RS04745 -0.9 -0.9 hypothetical protein compare
ABI39_RS02225 -0.9 -6.1 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit compare
ABI39_RS12435 -0.9 -2.9 GNAT family N-acetyltransferase compare
ABI39_RS16980 -0.9 -2.0 helix-turn-helix transcriptional regulator compare
ABI39_RS20175 -0.9 -2.0 translation elongation factor 4 compare
ABI39_RS00130 -0.9 -4.7 FecR domain-containing protein compare
ABI39_RS16705 -0.9 -6.9 translocation/assembly module TamB compare
ABI39_RS07420 -0.9 -1.7 acetyl-CoA carboxylase biotin carboxylase subunit compare
ABI39_RS06045 -0.8 -3.3 DedA family protein compare
ABI39_RS06885 -0.8 -2.1 hypothetical protein compare
ABI39_RS13190 -0.8 -4.0 hypothetical protein compare
ABI39_RS09995 -0.8 -2.3 AAA family ATPase compare
ABI39_RS15425 -0.8 -6.3 BamA/TamA family outer membrane protein compare
ABI39_RS13000 -0.8 -3.1 sigma-54-dependent Fis family transcriptional regulator compare
ABI39_RS07290 -0.8 -1.8 helix-turn-helix domain-containing protein compare
ABI39_RS20170 -0.8 -3.0 Na+/H+ antiporter NhaA compare
ABI39_RS02055 -0.8 -2.6 BamA/TamA family outer membrane protein compare
ABI39_RS14000 -0.8 -2.7 hypothetical protein compare
ABI39_RS16235 -0.8 -1.5 hypothetical protein compare
ABI39_RS13225 -0.8 -1.4 phosphopyruvate hydratase compare
ABI39_RS12755 -0.8 -1.8 SurA N-terminal domain-containing protein compare
ABI39_RS10250 -0.8 -1.9 DNA alkylation repair protein compare
ABI39_RS02985 -0.8 -2.0 arginine repressor compare


Specific Phenotypes

None in this experiment

For Phocaeicola dorei CL03T12C01 in carbon source experiments

For carbon source N-Acetyl-D-Glucosamine across organisms