Experiment set3S368 for Escherichia coli ECOR27

Compare to:

Bas37

200 most important genes:

  gene name fitness t score description  
NOLOHH_06715 wecA -8.7 -6.0 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
NOLOHH_07555 rfaJ -7.7 -5.3 glucosyltransferase compare
NOLOHH_15730 -7.6 -5.3 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
NOLOHH_07560 rfaB -7.5 -5.2 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
NOLOHH_07565 rfaL -7.4 -7.3 O-antigen ligase RfaL compare
NOLOHH_07545 waaO -6.8 -4.7 lipopolysaccharide 3-alpha-galactosyltransferase compare
NOLOHH_06665 wzyE -6.7 -4.6 ECA oligosaccharide polymerase compare
NOLOHH_23145 galE -6.2 -4.3 UDP-glucose 4-epimerase GalE compare
NOLOHH_06675 wzxE -5.6 -3.9 lipid III flippase WzxE compare
NOLOHH_18120 uidR -5.0 -3.3 DNA-binding transcriptional regulator UidR compare
NOLOHH_05490 hupA -4.4 -3.0 DNA-binding protein HU-alpha compare
NOLOHH_24225 traJ -4.2 -1.7 conjugal transfer transcriptional regulator TraJ compare
NOLOHH_20460 galU -4.1 -2.8 UTP--glucose-1-phosphate uridylyltransferase GalU compare
NOLOHH_07535 rfaG -3.7 -8.3 Lipopolysaccharide core biosynthesis protein RfaG compare
NOLOHH_00405 hipB -3.7 -1.5 XRE family transcriptional regulator compare
NOLOHH_12800 ratA -3.7 -2.5 type II toxin-antitoxin system toxin RatA compare
NOLOHH_07575 rfaF -3.6 -2.5 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_23310 odhB -3.2 -2.7 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
NOLOHH_06395 rfaH -3.1 -6.4 transcription/translation regulatory transformer protein RfaH compare
NOLOHH_23480 pgm -3.0 -4.5 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_00620 -3.0 -1.6 Orf33, orf151, orf56, orf96, rus, orf45, orf8, orf127, and nmpC genes compare
NOLOHH_11365 rpiA -2.9 -3.9 ribose-5-phosphate isomerase RpiA compare
NOLOHH_00445 -2.9 -4.4 peptidyl-arginine deiminase compare
NOLOHH_14780 apbE -2.6 -4.9 FAD:protein FMN transferase ApbE compare
NOLOHH_13055 rseA -2.6 -3.0 anti-sigma-E factor RseA compare
NOLOHH_19240 potB -2.5 -1.8 spermidine/putrescine ABC transporter permease compare
NOLOHH_02845 aceE -2.4 -2.8 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_11775 yqeJ -2.4 -1.6 Uncharacterized protein YqeJ compare
NOLOHH_01960 ykgR -2.3 -1.6 Uncharacterized membrane protein YkgR compare
NOLOHH_02390 gmhB -2.3 -2.7 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase compare
NOLOHH_04525 miaA -2.3 -2.5 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
NOLOHH_06920 mnmG -2.3 -7.4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_13070 rseC -2.2 -4.7 SoxR-reducing system protein RseC compare
NOLOHH_11425 ubiI -2.2 -2.9 FAD-dependent 2-octaprenylphenol hydroxylase compare
NOLOHH_13865 crr -2.1 -1.9 PTS glucose transporter subunit IIA compare
NOLOHH_20735 fadR -2.1 -2.1 fatty acid metabolism transcriptional regulator FadR compare
NOLOHH_02580 glnD -1.9 -2.0 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
NOLOHH_19195 mcbR -1.9 -1.7 colanic acid/biofilm transcriptional regulator McbR compare
NOLOHH_21130 yceD -1.9 -3.3 23S rRNA accumulation protein YceD compare
NOLOHH_03020 rsmH -1.9 -3.2 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
NOLOHH_04655 epmB -1.9 -2.2 EF-P beta-lysylation protein EpmB compare
NOLOHH_12805 rnfH -1.8 -2.5 RnfH family protein compare
NOLOHH_11650 Gly_trna -1.8 -1.4 tRNA-Gly(ccc) compare
NOLOHH_13310 hscA -1.8 -3.7 Fe-S protein assembly chaperone HscA compare
NOLOHH_03190 apaH -1.7 -6.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_17975 sodC -1.7 -1.5 superoxide dismutase [Cu-Zn] SodC compare
NOLOHH_18060 rsxD -1.7 -4.3 electron transport complex subunit RsxD compare
NOLOHH_03170 surA -1.7 -4.1 peptidylprolyl isomerase SurA compare
NOLOHH_07125 -1.6 -2.9 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_02690 dksA -1.6 -5.4 RNA polymerase-binding protein DksA compare
NOLOHH_13320 iscX -1.5 -1.6 Fe-S cluster assembly protein IscX compare
NOLOHH_11230 tkt -1.5 -2.8 transketolase compare
NOLOHH_09875 secG -1.5 -1.8 preprotein translocase subunit SecG compare
NOLOHH_21890 ssuE -1.5 -1.2 NADPH-dependent FMN reductase compare
NOLOHH_09845 greA -1.5 -1.8 transcription elongation factor GreA compare
NOLOHH_13415 guaA -1.5 -1.3 glutamine-hydrolyzing GMP synthase compare
NOLOHH_17810 pykF -1.4 -2.0 pyruvate kinase PykF compare
NOLOHH_04005 Leu_trna -1.4 -1.6 tRNA-Leu(caa) compare
NOLOHH_23255 tolQ -1.4 -1.8 Tol-Pal system protein TolQ compare
NOLOHH_12545 recA -1.4 -2.4 recombinase RecA compare
NOLOHH_00565 -1.4 -1.5 Lambda prophage-derived head-to-tail joining protein W compare
NOLOHH_20520 narK -1.4 -2.4 nitrate transporter NarK compare
NOLOHH_06550 xerC -1.3 -1.6 tyrosine recombinase XerC compare
NOLOHH_17030 mntP -1.3 -1.9 manganese efflux pump MntP compare
NOLOHH_24040 ybdJ -1.2 -1.7 Uncharacterized protein YbdJ compare
NOLOHH_14495 nuoI -1.2 -2.1 NADH-quinone oxidoreductase subunit NuoI compare
NOLOHH_24470 -1.2 -1.4 prepilin-type cleavage/methylation domain-containing protein compare
NOLOHH_03375 dnaJ -1.2 -0.6 molecular chaperone DnaJ compare
NOLOHH_17330 ydjA -1.2 -1.0 NAD(P)H nitroreductase compare
NOLOHH_19420 ydbD -1.2 -1.5 Uncharacterized protein YdbD compare
NOLOHH_22085 ycaN -1.2 -1.3 Uncharacterized HTH-type transcriptional regulator YcaN compare
NOLOHH_14760 rcsB -1.2 -2.7 transcriptional regulator RcsB compare
NOLOHH_11245 -1.2 -1.2 Putative oxidoreductase compare
NOLOHH_16030 -1.2 -1.6 cobalamin biosynthesis protein compare
NOLOHH_17630 btuD -1.1 -1.6 vitamin B12 ABC transporter ATP-binding protein BtuD compare
NOLOHH_20815 -1.1 -2.1 autotransporter outer membrane beta-barrel domain-containing protein compare
NOLOHH_18245 mlc -1.1 -2.0 DNA-binding transcriptional repressor Mlc compare
NOLOHH_18660 dgcZ -1.1 -1.5 diguanylate cyclase DgcZ compare
NOLOHH_21170 flgI -1.1 -1.4 flagellar basal body P-ring protein FlgI compare
NOLOHH_07540 rfaP -1.1 -3.6 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_15960 pduM -1.1 -2.0 microcompartment protein PduM compare
NOLOHH_19260 hicB -1.1 -1.4 type II toxin-antitoxin system antitoxin HicB compare
NOLOHH_00940 -1.1 -1.1 RHS repeat protein compare
NOLOHH_08775 -1.1 -4.7 NfuA family Fe-S biogenesis protein compare
NOLOHH_14480 nuoF -1.1 -4.3 NADH-quinone oxidoreductase subunit NuoF compare
NOLOHH_05830 metJ -1.1 -1.2 met regulon transcriptional regulator MetJ compare
NOLOHH_00385 -1.1 -0.9 hypothetical protein compare
NOLOHH_13035 srmB -1.1 -4.3 ATP-dependent RNA helicase SrmB compare
NOLOHH_23245 tolA -1.0 -3.2 cell envelope integrity protein TolA compare
NOLOHH_13185 glyA -1.0 -3.8 serine hydroxymethyltransferase compare
NOLOHH_11495 xerD -1.0 -1.5 site-specific tyrosine recombinase XerD compare
NOLOHH_17555 pfkB -1.0 -1.0 6-phosphofructokinase II compare
NOLOHH_13075 lepA -1.0 -2.7 translation elongation factor 4 compare
NOLOHH_14470 nuoC -1.0 -4.6 NADH-quinone oxidoreductase subunit C/D compare
NOLOHH_06300 dsbA -1.0 -2.4 thiol:disulfide interchange protein DsbA compare
NOLOHH_02825 acnB -1.0 -1.9 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
NOLOHH_11770 yqeL -1.0 -1.6 Uncharacterized protein YqeL compare
NOLOHH_00090 -1.0 -1.6 hypothetical protein compare
NOLOHH_24625 -1.0 -1.3 hypothetical protein compare
NOLOHH_05230 plsB -1.0 -1.3 glycerol-3-phosphate 1-O-acyltransferase PlsB compare
NOLOHH_18070 rsxB -1.0 -1.5 electron transport complex subunit RsxB compare
NOLOHH_09835 obgE -1.0 -1.1 GTPase ObgE compare
NOLOHH_19995 tpx -1.0 -1.5 thiol peroxidase compare
NOLOHH_18420 quuQ -1.0 -2.7 Prophage antitermination Q-like protein QuuQ compare
NOLOHH_13390 bamB -0.9 -4.3 outer membrane protein assembly factor BamB compare
NOLOHH_23240 tolB -0.9 -4.0 Tol-Pal system protein TolB compare
NOLOHH_18765 glsB -0.9 -2.1 glutaminase B compare
NOLOHH_13645 ypfM -0.9 -1.3 protein YpfM compare
NOLOHH_15670 wcaF -0.9 -1.9 colanic acid biosynthesis acetyltransferase WcaF compare
NOLOHH_06520 -0.9 -1.0 DUF3289 domain-containing protein compare
NOLOHH_20710 nhaP2 -0.9 -1.9 potassium/proton antiporter compare
NOLOHH_21490 efeU -0.9 -1.0 Ferrous iron permease EfeU compare
NOLOHH_14485 nuoG -0.9 -4.1 NADH-quinone oxidoreductase subunit NuoG compare
NOLOHH_17480 chbC -0.9 -2.0 PTS N,N'-diacetylchitobiose transporter subunit IIC compare
NOLOHH_17355 gdhA -0.9 -2.3 NADP-specific glutamate dehydrogenase compare
NOLOHH_20915 phoP -0.9 -1.2 two-component system response regulator PhoP compare
NOLOHH_10610 tolC -0.9 -2.1 outer membrane channel protein TolC compare
NOLOHH_07530 rfaQ -0.9 -5.1 lipopolysaccharide core heptosyltransferase RfaQ compare
NOLOHH_00615 quuD -0.9 -0.9 antitermination protein QuuD compare
NOLOHH_15735 galF -0.9 -2.4 UTP--glucose-1-phosphate uridylyltransferase GalF compare
NOLOHH_15315 yehE -0.9 -1.7 Uncharacterized protein YehE compare
NOLOHH_11235 cmtB -0.9 -1.3 PTS mannitol transporter subunit IIA compare
NOLOHH_20185 rnb -0.9 -1.3 exoribonuclease II compare
NOLOHH_14160 Arg_trna -0.9 -1.8 tRNA-Arg(cct) compare
NOLOHH_16100 -0.8 -1.9 integrase compare
NOLOHH_24200 lomR -0.8 -2.4 Ail/Lom family protein compare
NOLOHH_22435 dgcI -0.8 -1.8 putative diguanylate cyclase DgcI compare
NOLOHH_17675 ydiT -0.8 -0.8 Ferredoxin-like protein YdiT compare
NOLOHH_01270 clpP -0.8 -1.7 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_17270 yeaC -0.8 -1.6 Uncharacterized protein YeaC compare
NOLOHH_24100 -0.8 -3.6 Uncharacterized conserved protein compare
NOLOHH_15455 gatZ -0.8 -1.0 tagatose-bisphosphate aldolase subunit GatZ compare
NOLOHH_23320 sdhB -0.8 -3.0 succinate dehydrogenase iron-sulfur subunit SdhB compare
NOLOHH_20285 yciK -0.8 -1.5 YciK family oxidoreductase compare
NOLOHH_23510 fur -0.8 -1.8 ferric iron uptake transcriptional regulator compare
NOLOHH_20550 chaC -0.8 -1.3 glutathione-specific gamma-glutamylcyclotransferase compare
NOLOHH_15980 -0.8 -2.7 propanediol dehydratase compare
NOLOHH_06220 typA -0.8 -6.3 ribosome-dependent GTPase TypA compare
NOLOHH_18155 fumC -0.8 -1.1 class II fumarate hydratase compare
NOLOHH_08375 pitA -0.8 -2.7 inorganic phosphate transporter PitA compare
NOLOHH_04520 hfq -0.8 -1.1 RNA chaperone Hfq compare
NOLOHH_06590 cyaA -0.8 -4.5 class I adenylate cyclase compare
NOLOHH_18305 ynfA -0.8 -1.0 YnfA family protein compare
NOLOHH_14305 truA -0.8 -2.6 tRNA pseudouridine(38-40) synthase TruA compare
NOLOHH_19480 paaC -0.8 -2.9 phenylacetate-CoA oxygenase subunit PaaC compare
NOLOHH_22890 Asn_trna -0.8 -1.2 tRNA-Asn(gtt) compare
NOLOHH_00650 -0.8 -1.0 hypothetical protein compare
NOLOHH_11490 fldB -0.8 -4.1 flavodoxin FldB compare
NOLOHH_14855 ccmA -0.8 -2.4 cytochrome c biogenesis heme-transporting ATPase CcmA compare
NOLOHH_23105 pgl -0.8 -3.7 6-phosphogluconolactonase compare
NOLOHH_06385 fre -0.8 -4.3 NAD(P)H-flavin reductase compare
NOLOHH_15130 yeiS -0.8 -2.2 Uncharacterized protein YeiS compare
NOLOHH_09730 ptsN -0.8 -1.9 PTS IIA-like nitrogen regulatory protein PtsN compare
NOLOHH_22285 artQ -0.8 -1.0 arginine ABC transporter permease ArtQ compare
NOLOHH_13715 eutM -0.7 -2.0 ethanolamine utilization microcompartment protein EutM compare
NOLOHH_04460 -0.7 -1.5 DUF2491 domain-containing protein compare
NOLOHH_14535 -0.7 -1.6 ElaD/SseL family deubiquitinase compare
NOLOHH_12660 proV -0.7 -3.7 glycine betaine/L-proline ABC transporter ATP-binding protein ProV compare
NOLOHH_15110 mglA -0.7 -1.2 galactose/methyl galactoside ABC transporter ATP-binding protein MglA compare
NOLOHH_21540 rutF -0.7 -1.8 malonic semialdehyde reductase compare
NOLOHH_20510 narH -0.7 -2.3 nitrate reductase subunit beta compare
NOLOHH_01255 lon_P403L -0.7 -3.7 Lon protease compare
NOLOHH_18255 clcB -0.7 -1.4 voltage-gated ClC-type chloride channel ClcB compare
NOLOHH_22905 ninH -0.7 -1.9 Protein ninH compare
NOLOHH_16505 ftnB -0.7 -0.9 non-heme ferritin-like protein compare
NOLOHH_10075 agaB -0.7 -1.4 PTS galactosamine transporter subunit IIB compare
NOLOHH_18110 malI -0.7 -1.1 mal regulon transcriptional regulator MalI compare
NOLOHH_20925 roxA -0.7 -2.2 [50S ribosomal protein L16]-arginine 3-hydroxylase compare
NOLOHH_08495 yhhL -0.7 -1.1 DUF1145 domain-containing protein compare
NOLOHH_21480 efeB -0.7 -1.4 iron uptake transporter deferrochelatase/peroxidase subunit compare
NOLOHH_21335 mdoC -0.7 -2.2 glucans biosynthesis protein MdoC compare
NOLOHH_16700 -0.7 -1.3 putative transcriptional regulatory protein YebC compare
NOLOHH_10655 qseC -0.7 -4.4 two-component system sensor histidine kinase QseC compare
NOLOHH_17265 msrB -0.7 -3.3 Peptide methionine sulfoxide reductase MsrB compare
NOLOHH_17880 mdtK -0.7 -2.2 multidrug efflux MATE transporter MdtK compare
NOLOHH_05335 pgi -0.7 -4.8 glucose-6-phosphate isomerase compare
NOLOHH_05005 ytcA -0.7 -1.5 Uncharacterized protein YtcA compare
NOLOHH_19435 paaX -0.7 -1.0 phenylacetic acid degradation operon negative regulatory protein PaaX compare
NOLOHH_00520 -0.7 -1.5 Tail tube protein compare
NOLOHH_20410 oppC -0.7 -1.9 oligopeptide ABC transporter permease OppC compare
NOLOHH_05695 sthA -0.7 -3.3 Si-specific NAD(P)(+) transhydrogenase compare
NOLOHH_19190 yncD -0.7 -2.1 putative TonB-dependent receptor YncD compare
NOLOHH_14790 alkB -0.7 -1.9 DNA oxidative demethylase AlkB compare
NOLOHH_14340 ubiX -0.7 -1.3 flavin prenyltransferase UbiX compare
NOLOHH_04165 treC -0.7 -2.5 alpha,alpha-phosphotrehalase compare
NOLOHH_21020 ndh -0.7 -2.7 NADH-quinone dehydrogenase compare
NOLOHH_01905 -0.7 -1.1 Uncharacterized protein YkgH compare
NOLOHH_09430 yhdV -0.7 -1.5 Uncharacterized protein YhdV compare
NOLOHH_17305 ydjF -0.7 -1.6 Uncharacterized HTH-type transcriptional regulator YdjF compare
NOLOHH_12365 pphB -0.7 -2.0 protein-serine/threonine phosphatase compare
NOLOHH_16340 fliG -0.7 -2.0 flagellar motor switch protein FliG compare
NOLOHH_00560 -0.6 -0.9 phage portal protein compare
NOLOHH_07950 cspA -0.6 -1.4 Major cold shock protein compare
NOLOHH_18065 rsxC -0.6 -2.6 electron transport complex subunit RsxC compare
NOLOHH_13735 eutG -0.6 -2.0 ethanolamine utilization ethanol dehydrogenase EutG compare
NOLOHH_19900 dgcM -0.6 -1.7 diguanylate cyclase DgcM compare
NOLOHH_11940 recD -0.6 -2.6 exodeoxyribonuclease V subunit alpha compare
NOLOHH_17325 sppA -0.6 -2.3 signal peptide peptidase SppA compare
NOLOHH_14500 nuoJ -0.6 -1.6 NADH-quinone oxidoreductase subunit J compare
NOLOHH_16295 fliP -0.6 -2.3 flagellar type III secretion system pore protein FliP compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms