Experiment set3S359 for Phocaeicola dorei CL03T12C01

Compare to:

D-Fructose 2.5 mg/ml carbon source

200 most important genes:

  gene name fitness t score description  
ABI39_RS08235 -6.6 -9.1 carbohydrate kinase compare
ABI39_RS21065 -6.3 -8.7 indole-3-glycerol phosphate synthase TrpC compare
ABI39_RS08230 -5.6 -12.3 MFS transporter compare
ABI39_RS11835 -5.2 -5.1 histidinol dehydrogenase compare
ABI39_RS08240 -4.9 -13.7 substrate-binding domain-containing protein compare
ABI39_RS02315 -4.9 -11.7 IMP dehydrogenase compare
ABI39_RS14225 -4.8 -9.0 glycosyltransferase compare
ABI39_RS06055 -4.8 -10.1 phosphoribosylamine--glycine ligase compare
ABI39_RS10260 -4.6 -8.6 adenylosuccinate synthase compare
ABI39_RS04685 -4.4 -10.1 acetylglutamate kinase compare
ABI39_RS21045 -4.4 -6.6 tryptophan synthase subunit beta compare
ABI39_RS21075 -4.2 -8.5 tryptophan synthase subunit alpha compare
ABI39_RS00205 -4.2 -4.1 phosphoglucosamine mutase compare
ABI39_RS01415 -4.2 -2.9 branched-chain amino acid aminotransferase compare
ABI39_RS21050 -4.2 -8.2 anthranilate synthase component I family protein compare
ABI39_RS19385 -4.2 -4.0 hypothetical protein compare
ABI39_RS14230 -4.1 -12.6 alpha-amylase compare
ABI39_RS02975 -4.0 -12.6 argininosuccinate synthase compare
ABI39_RS04795 -4.0 -2.7 M28 family peptidase compare
ABI39_RS10505 -4.0 -12.2 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
ABI39_RS19935 -4.0 -9.2 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
ABI39_RS07790 -4.0 -11.8 M20 family metallo-hydrolase compare
ABI39_RS05450 -3.9 -5.3 redox-regulated ATPase YchF compare
ABI39_RS02980 -3.9 -8.7 N-acetyltransferase compare
ABI39_RS02870 -3.8 -8.1 acetylornithine carbamoyltransferase compare
ABI39_RS07095 -3.8 -18.0 argininosuccinate lyase compare
ABI39_RS16905 -3.7 -11.6 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABI39_RS11830 -3.7 -5.6 ATP phosphoribosyltransferase compare
ABI39_RS17315 -3.7 -13.4 alpha amylase C-terminal domain-containing protein compare
ABI39_RS14560 -3.7 -3.6 aspartate 1-decarboxylase compare
ABI39_RS02970 -3.6 -8.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABI39_RS12665 -3.6 -9.6 shikimate dehydrogenase compare
ABI39_RS02875 -3.6 -10.6 glutamate-5-semialdehyde dehydrogenase compare
ABI39_RS10495 -3.5 -5.3 prephenate dehydrogenase compare
ABI39_RS21060 -3.5 -7.0 anthranilate phosphoribosyltransferase compare
ABI39_RS10215 -3.4 -11.3 3-isopropylmalate dehydrogenase compare
ABI39_RS12715 -3.4 -10.5 dihydroxy-acid dehydratase compare
ABI39_RS21350 -3.3 -2.3 aspartate--ammonia ligase compare
ABI39_RS05660 -3.3 -11.0 acetyl-CoA hydrolase/transferase family protein compare
ABI39_RS00405 -3.3 -20.3 phosphoribosylformylglycinamidine synthase compare
ABI39_RS07005 -3.3 -8.9 type II 3-dehydroquinate dehydratase compare
ABI39_RS10510 -3.2 -8.4 prephenate dehydratase compare
ABI39_RS10200 -3.2 -12.4 3-isopropylmalate dehydratase large subunit compare
ABI39_RS00475 -3.2 -8.3 phosphoribosylformylglycinamidine cyclo-ligase compare
ABI39_RS12735 -3.2 -8.0 ketol-acid reductoisomerase compare
ABI39_RS10195 -3.1 -11.2 2-isopropylmalate synthase compare
ABI39_RS16910 -3.1 -11.3 3-phosphoglycerate dehydrogenase compare
ABI39_RS09845 -3.1 -3.7 (d)CMP kinase compare
ABI39_RS17420 -3.1 -7.6 serine hydroxymethyltransferase compare
ABI39_RS10870 -3.1 -12.2 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD compare
ABI39_RS10500 -3.1 -5.3 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type II compare
ABI39_RS19925 -3.1 -6.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABI39_RS11845 -3.1 -8.0 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
ABI39_RS12675 -3.1 -6.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABI39_RS19950 -3.0 -5.0 diaminopimelate decarboxylase compare
ABI39_RS02960 -3.0 -13.5 pyrroline-5-carboxylate reductase compare
ABI39_RS02880 -3.0 -11.1 glutamate 5-kinase compare
ABI39_RS10205 -3.0 -6.7 3-isopropylmalate dehydratase small subunit compare
ABI39_RS12720 -3.0 -14.0 biosynthetic-type acetolactate synthase large subunit compare
ABI39_RS10640 -3.0 -10.3 serine dehydratase subunit alpha family protein compare
ABI39_RS00515 -2.9 -4.5 hypothetical protein compare
ABI39_RS11840 -2.9 -5.7 histidinol-phosphate transaminase compare
ABI39_RS10430 -2.9 -11.7 bifunctional aspartate kinase/homoserine dehydrogenase I compare
ABI39_RS08035 -2.9 -2.0 adenylosuccinate lyase compare
ABI39_RS10435 -2.9 -9.4 cofactor-independent phosphoglycerate mutase compare
ABI39_RS10440 -2.9 -8.1 threonine synthase compare
ABI39_RS10210 -2.8 -10.8 2-isopropylmalate synthase compare
ABI39_RS04885 -2.8 -2.7 calcium-translocating P-type ATPase, PMCA-type compare
ABI39_RS09855 -2.7 -1.9 polyprenyl synthetase family protein compare
ABI39_RS12645 -2.7 -15.0 chorismate synthase compare
ABI39_RS04695 -2.7 -7.0 shikimate kinase compare
ABI39_RS04690 -2.7 -11.1 biosynthetic arginine decarboxylase compare
ABI39_RS04245 -2.6 -2.8 5-(carboxyamino)imidazole ribonucleotide mutase compare
ABI39_RS02500 -2.6 -11.8 pyridoxine 5'-phosphate synthase compare
ABI39_RS09575 -2.6 -3.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABI39_RS19930 -2.6 -7.5 imidazole glycerol phosphate synthase subunit HisF compare
ABI39_RS06250 -2.6 -14.6 4-phosphoerythronate dehydrogenase PdxB compare
ABI39_RS12955 -2.6 -7.2 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
ABI39_RS02965 -2.6 -14.2 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme compare
ABI39_RS04505 -2.6 -4.0 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
ABI39_RS08220 -2.5 -8.6 TonB-dependent receptor compare
ABI39_RS00770 -2.5 -13.4 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS02140 -2.5 -1.7 TetR/AcrR family transcriptional regulator compare
ABI39_RS09195 -2.4 -3.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABI39_RS06670 -2.4 -10.8 2-oxoacid:acceptor oxidoreductase subunit alpha compare
ABI39_RS19920 -2.3 -8.9 imidazole glycerol phosphate synthase subunit HisH compare
ABI39_RS05175 -2.3 -7.5 4-hydroxy-tetrahydrodipicolinate reductase compare
ABI39_RS17160 -2.3 -1.5 VWA domain-containing protein compare
ABI39_RS01300 -2.2 -10.2 NADP-specific glutamate dehydrogenase compare
ABI39_RS07090 -2.2 -2.5 hypothetical protein compare
ABI39_RS04860 -2.2 -4.3 HigA family addiction module antidote protein compare
ABI39_RS06675 -2.2 -6.5 2-oxoacid:ferredoxin oxidoreductase subunit beta compare
ABI39_RS02755 -2.1 -2.4 glycosyltransferase compare
ABI39_RS19945 -2.0 -7.5 aspartate kinase compare
ABI39_RS17320 -2.0 -2.0 YhcH/YjgK/YiaL family protein compare
ABI39_RS11405 -1.9 -8.3 hypothetical protein compare
ABI39_RS04950 -1.9 -2.7 DEAD/DEAH box helicase compare
ABI39_RS17150 -1.9 -3.3 hypothetical protein compare
ABI39_RS11505 -1.8 -1.6 YccF domain-containing protein compare
ABI39_RS17945 -1.8 -9.3 glutamine synthetase III compare
ABI39_RS08145 -1.8 -2.6 DUF4290 domain-containing protein compare
ABI39_RS12560 -1.8 -6.6 GGGtGRT protein compare
ABI39_RS08135 -1.8 -2.2 YicC family protein compare
ABI39_RS04280 -1.7 -4.6 DUF4292 domain-containing protein compare
ABI39_RS14070 -1.7 -1.8 DNA-binding protein compare
ABI39_RS06380 -1.7 -8.4 GH3 auxin-responsive promoter family protein compare
ABI39_RS18745 -1.6 -5.0 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
ABI39_RS21055 -1.6 -4.8 aminodeoxychorismate/anthranilate synthase component II compare
ABI39_RS19985 -1.6 -2.0 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS17170 -1.6 -1.8 protein BatD compare
ABI39_RS14030 -1.6 -4.3 MFS transporter compare
ABI39_RS12945 -1.6 -4.7 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN compare
ABI39_RS04700 -1.5 -3.2 type I DNA topoisomerase compare
ABI39_RS10650 -1.5 -10.4 AraC family transcriptional regulator compare
ABI39_RS15410 -1.5 -5.3 DUF4296 domain-containing protein compare
ABI39_RS16320 -1.5 -1.7 DUF3989 domain-containing protein compare
ABI39_RS12725 -1.5 -3.4 acetolactate synthase small subunit compare
ABI39_RS17175 -1.5 -4.0 tetratricopeptide repeat protein compare
ABI39_RS14185 -1.5 -6.9 formate-dependent phosphoribosylglycinamide formyltransferase compare
ABI39_RS12565 -1.4 -3.7 hypothetical protein compare
ABI39_RS00760 -1.4 -2.2 YjgP/YjgQ family permease compare
ABI39_RS00520 -1.4 -7.3 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABI39_RS11940 -1.4 -9.1 saccharopine dehydrogenase family protein compare
ABI39_RS15360 -1.4 -4.6 Na+/H+ antiporter NhaC family protein compare
ABI39_RS07420 -1.4 -4.5 acetyl-CoA carboxylase biotin carboxylase subunit compare
ABI39_RS16870 -1.4 -2.6 Na(+)-translocating NADH-quinone reductase subunit A compare
ABI39_RS17140 -1.4 -2.2 AAA family ATPase compare
ABI39_RS14220 -1.4 -4.7 glycogen debranching enzyme N-terminal domain-containing protein compare
ABI39_RS15620 -1.3 -9.1 anaerobic ribonucleoside-triphosphate reductase compare
ABI39_RS20965 -1.3 -1.7 SPOR domain-containing protein compare
ABI39_RS14465 -1.3 -5.9 hypothetical protein compare
ABI39_RS17950 -1.3 -2.2 Crp/Fnr family transcriptional regulator compare
ABI39_RS18740 -1.3 -4.4 ATP-binding protein compare
ABI39_RS08185 -1.3 -5.6 hemolysin III family protein compare
ABI39_RS09515 -1.3 -3.1 nucleoside deaminase compare
ABI39_RS02470 -1.2 -3.3 ATP-dependent DNA helicase RecG compare
ABI39_RS09995 -1.2 -4.5 AAA family ATPase compare
ABI39_RS06060 -1.2 -4.4 S9 family peptidase compare
ABI39_RS16875 -1.2 -2.5 NADH:ubiquinone reductase (Na(+)-transporting) subunit B compare
ABI39_RS12980 -1.2 -2.9 HAD family hydrolase compare
ABI39_RS15415 -1.2 -2.3 hypothetical protein compare
ABI39_RS20915 -1.2 -2.4 50S ribosomal protein L35 compare
ABI39_RS11545 -1.2 -4.5 hypothetical protein compare
ABI39_RS06995 -1.2 -5.6 tetratricopeptide repeat protein compare
ABI39_RS19615 -1.2 -1.6 hypothetical protein compare
ABI39_RS09230 -1.2 -1.2 hypothetical protein compare
ABI39_RS09685 -1.1 -1.9 hypothetical protein compare
ABI39_RS04730 -1.1 -1.9 Lrp/AsnC ligand binding domain-containing protein compare
ABI39_RS01360 -1.1 -5.3 hypothetical protein compare
ABI39_RS16095 -1.1 -1.4 helix-turn-helix domain-containing protein compare
ABI39_RS10000 -1.1 -6.9 DUF4435 domain-containing protein compare
ABI39_RS09850 -1.1 -2.3 energy transducer TonB compare
ABI39_RS10415 -1.1 -2.1 DUF1847 domain-containing protein compare
ABI39_RS10110 -1.1 -7.0 S9 family peptidase compare
ABI39_RS08195 -1.1 -4.4 hypothetical protein compare
ABI39_RS17105 -1.0 -2.5 CinA family protein compare
ABI39_RS00410 -1.0 -2.4 response regulator compare
ABI39_RS11655 -1.0 -1.3 MFS transporter compare
ABI39_RS14150 -1.0 -6.6 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABI39_RS11875 -1.0 -2.4 OmpH family outer membrane protein compare
ABI39_RS20405 -1.0 -2.6 GDP-L-fucose synthase compare
ABI39_RS08720 -1.0 -1.7 DUF1896 domain-containing protein compare
ABI39_RS05280 -1.0 -6.0 S41 family peptidase compare
ABI39_RS22135 -1.0 -2.0 type II toxin-antitoxin system RelE/ParE family toxin compare
ABI39_RS12150 -1.0 -1.9 hotdog fold thioesterase compare
ABI39_RS02480 -0.9 -2.3 DJ-1/PfpI family protein compare
ABI39_RS08225 -0.9 -2.4 GH32 C-terminal domain-containing protein compare
ABI39_RS16235 -0.9 -1.1 hypothetical protein compare
ABI39_RS18330 -0.9 -4.5 PD40 domain-containing protein compare
ABI39_RS04970 -0.9 -2.6 Holliday junction branch migration DNA helicase RuvB compare
ABI39_RS01325 -0.9 -5.7 phosphoenolpyruvate synthase compare
ABI39_RS09285 -0.9 -1.2 hypothetical protein compare
ABI39_RS23050 -0.9 -1.5 hypothetical protein compare
ABI39_RS06065 -0.9 -1.4 RNA methyltransferase compare
ABI39_RS06070 -0.9 -1.6 hypothetical protein compare
ABI39_RS18070 -0.9 -1.5 DUF3874 domain-containing protein compare
ABI39_RS11785 -0.9 -3.4 TolC family protein compare
ABI39_RS13160 -0.9 -2.1 DUF4847 family protein compare
ABI39_RS17965 -0.9 -2.7 YegS/Rv2252/BmrU family lipid kinase compare
ABI39_RS20715 -0.8 -1.7 tRNA-Thr compare
ABI39_RS18020 -0.8 -1.8 GlsB/YeaQ/YmgE family stress response membrane protein compare
ABI39_RS09245 -0.8 -4.6 cardiolipin synthase compare
ABI39_RS15990 -0.8 -2.0 hypothetical protein compare
ABI39_RS08480 -0.8 -1.0 histidine kinase compare
ABI39_RS01905 -0.8 -2.7 [FeFe] hydrogenase H-cluster radical SAM maturase HydE compare
ABI39_RS16310 -0.8 -2.1 conjugative transposon protein TraJ compare
ABI39_RS20440 -0.8 -4.7 SLBB domain-containing protein compare
ABI39_RS20700 -0.8 -3.4 AAA family ATPase compare
ABI39_RS15265 -0.8 -1.5 crossover junction endodeoxyribonuclease RuvC compare
ABI39_RS20175 -0.8 -1.7 translation elongation factor 4 compare
ABI39_RS02355 -0.8 -2.6 ABC transporter ATP-binding protein compare
ABI39_RS08180 -0.8 -5.1 anaerobic ribonucleoside triphosphate reductase compare
ABI39_RS02125 -0.8 -1.1 hypothetical protein compare
ABI39_RS08305 -0.7 -3.5 DUF4831 family protein compare
ABI39_RS17730 -0.7 -4.2 carboxynorspermidine decarboxylase compare
ABI39_RS19915 -0.7 -4.6 formyltetrahydrofolate deformylase compare
ABI39_RS02290 -0.7 -1.4 hypothetical protein compare
ABI39_RS11140 -0.7 -0.9 undecaprenyl-phosphate glucose phosphotransferase compare
ABI39_RS03830 -0.7 -1.2 ribosome-associated translation inhibitor RaiA compare
ABI39_RS21100 -0.7 -2.3 gliding motility-associated protein GldE compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source D-Fructose in Phocaeicola dorei CL03T12C01

For carbon source D-Fructose across organisms