Experiment set3S348 for Escherichia coli ECOR27

Compare to:

TP15

200 most important genes:

  gene name fitness t score description  
NOLOHH_06715 wecA -8.0 -9.5 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
NOLOHH_07565 rfaL -7.4 -5.1 O-antigen ligase RfaL compare
NOLOHH_15730 -7.2 -5.0 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
NOLOHH_07560 rfaB -6.9 -4.8 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
NOLOHH_06665 wzyE -6.1 -4.2 ECA oligosaccharide polymerase compare
NOLOHH_23480 pgm -5.2 -3.6 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_06675 wzxE -5.0 -3.5 lipid III flippase WzxE compare
NOLOHH_23545 nagA -3.9 -9.3 N-acetylglucosamine-6-phosphate deacetylase compare
NOLOHH_18060 rsxD -3.4 -5.1 electron transport complex subunit RsxD compare
NOLOHH_12805 rnfH -3.3 -3.2 RnfH family protein compare
NOLOHH_09630 sspA -3.3 -6.2 stringent starvation protein A compare
NOLOHH_18050 rsxE -3.3 -3.6 electron transport complex subunit RsxE compare
NOLOHH_14780 apbE -3.2 -4.1 FAD:protein FMN transferase ApbE compare
NOLOHH_02390 gmhB -3.2 -2.2 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase compare
NOLOHH_09845 greA -3.0 -2.2 transcription elongation factor GreA compare
NOLOHH_13055 rseA -3.0 -2.0 anti-sigma-E factor RseA compare
NOLOHH_13070 rseC -2.9 -5.9 SoxR-reducing system protein RseC compare
NOLOHH_06395 rfaH -2.8 -7.3 transcription/translation regulatory transformer protein RfaH compare
NOLOHH_07125 -2.7 -4.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_06920 mnmG -2.7 -5.5 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_07540 rfaP -2.6 -6.2 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_12625 emrR -2.6 -4.3 multidrug efflux transporter EmrAB transcriptional repressor EmrR compare
NOLOHH_24225 traJ -2.6 -1.5 conjugal transfer transcriptional regulator TraJ compare
NOLOHH_00445 -2.6 -7.0 peptidyl-arginine deiminase compare
NOLOHH_03375 dnaJ -2.5 -2.0 molecular chaperone DnaJ compare
NOLOHH_11480 sdhE -2.5 -1.4 FAD assembly factor SdhE compare
NOLOHH_12800 ratA -2.4 -2.3 type II toxin-antitoxin system toxin RatA compare
NOLOHH_04655 epmB -2.1 -2.1 EF-P beta-lysylation protein EpmB compare
NOLOHH_19260 hicB -2.1 -1.8 type II toxin-antitoxin system antitoxin HicB compare
NOLOHH_11495 xerD -2.0 -2.7 site-specific tyrosine recombinase XerD compare
NOLOHH_09835 obgE -2.0 -1.6 GTPase ObgE compare
NOLOHH_03170 surA -2.0 -4.6 peptidylprolyl isomerase SurA compare
NOLOHH_09905 nusA -2.0 -4.1 Transcription termination/antitermination protein NusA compare
NOLOHH_18070 rsxB -2.0 -1.6 electron transport complex subunit RsxB compare
NOLOHH_13075 lepA -1.9 -4.3 translation elongation factor 4 compare
NOLOHH_06550 xerC -1.9 -1.9 tyrosine recombinase XerC compare
NOLOHH_14310 -1.8 -6.2 Protein DedA compare
NOLOHH_18855 fimA -1.8 -1.4 type 1 fimbrial major subunit FimA compare
NOLOHH_15160 yohP -1.7 -1.4 protein YohP compare
NOLOHH_12165 -1.7 -1.9 LemA family compare
NOLOHH_17365 nudG -1.7 -1.4 CTP pyrophosphohydrolase compare
NOLOHH_21675 cbdX -1.6 -1.3 cytochrome bd-II oxidase subunit CbdX compare
NOLOHH_20710 nhaP2 -1.6 -3.0 potassium/proton antiporter compare
NOLOHH_21205 flgB -1.6 -1.3 flagellar basal body rod protein FlgB compare
NOLOHH_13435 -1.6 -1.1 hypothetical protein compare
NOLOHH_17270 yeaC -1.6 -1.9 Uncharacterized protein YeaC compare
NOLOHH_19510 feaR -1.6 -1.5 transcriptional regulator FeaR compare
NOLOHH_22435 dgcI -1.6 -2.1 putative diguanylate cyclase DgcI compare
NOLOHH_02845 aceE -1.5 -2.7 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_17190 yoaF -1.5 -1.2 DUF333 domain-containing protein compare
NOLOHH_20200 yciT -1.5 -1.5 DNA-binding transcriptional regulator YciT compare
NOLOHH_07575 rfaF -1.5 -2.2 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_06530 corA -1.5 -3.4 magnesium/cobalt transporter CorA compare
NOLOHH_21265 dinI -1.5 -1.7 DNA damage-inducible protein I compare
NOLOHH_24625 -1.5 -1.7 hypothetical protein compare
NOLOHH_14340 ubiX -1.4 -2.5 flavin prenyltransferase UbiX compare
NOLOHH_03190 apaH -1.4 -5.0 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_19485 paaB -1.4 -1.6 1,2-phenylacetyl-CoA epoxidase subunit B compare
NOLOHH_09875 secG -1.4 -1.6 preprotein translocase subunit SecG compare
NOLOHH_19995 tpx -1.4 -1.1 thiol peroxidase compare
NOLOHH_13415 guaA -1.4 -1.7 glutamine-hydrolyzing GMP synthase compare
NOLOHH_12630 ygaH -1.4 -3.4 L-valine transporter subunit YgaH compare
NOLOHH_19330 ydcJ -1.4 -1.8 Uncharacterized protein YdcJ compare
NOLOHH_20460 galU -1.4 -1.8 UTP--glucose-1-phosphate uridylyltransferase GalU compare
NOLOHH_21170 flgI -1.4 -2.8 flagellar basal body P-ring protein FlgI compare
NOLOHH_19580 sitD -1.4 -1.2 iron/manganese ABC transporter permease subunit SitD compare
NOLOHH_04165 treC -1.3 -4.2 alpha,alpha-phosphotrehalase compare
NOLOHH_01935 rclC -1.3 -1.8 reactive chlorine species resistance protein RclC compare
NOLOHH_13990 ypeD -1.3 -2.3 Protein YpeD compare
NOLOHH_23995 fes -1.3 -3.1 enterobactin/ferric enterobactin esterase compare
NOLOHH_19205 mddA -1.3 -2.0 L-methionine sulfoximine/L-methionine sulfone acetyltransferase compare
NOLOHH_06220 typA -1.3 -7.9 ribosome-dependent GTPase TypA compare
NOLOHH_19535 hslJ -1.3 -1.6 heat shock protein HslJ compare
NOLOHH_17230 cdgI -1.3 -1.8 putative diguanylate cyclase CdgI compare
NOLOHH_19165 vgrG,tssI -1.3 -2.1 type VI secretion system effector VgrG compare
NOLOHH_18065 rsxC -1.3 -3.5 electron transport complex subunit RsxC compare
NOLOHH_02825 acnB -1.3 -2.2 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
NOLOHH_13310 hscA -1.3 -2.4 Fe-S protein assembly chaperone HscA compare
NOLOHH_19435 paaX -1.2 -1.7 phenylacetic acid degradation operon negative regulatory protein PaaX compare
NOLOHH_20750 umuC -1.2 -1.7 DNA polymerase V catalytic protein compare
NOLOHH_05335 pgi -1.2 -6.5 glucose-6-phosphate isomerase compare
NOLOHH_15735 galF -1.2 -2.4 UTP--glucose-1-phosphate uridylyltransferase GalF compare
NOLOHH_20025 ycjV -1.2 -1.7 Uncharacterized ABC transporter ATP-binding protein YcjV compare
NOLOHH_21185 flgF -1.2 -2.1 flagellar basal-body rod protein FlgF compare
NOLOHH_08900 aroK -1.2 -1.3 shikimate kinase AroK compare
NOLOHH_17410 ydjX -1.2 -2.5 TVP38/TMEM64 family membrane protein YdjX compare
NOLOHH_23000 ea10 -1.2 -1.7 Protein ea10 compare
NOLOHH_23510 fur -1.2 -1.7 ferric iron uptake transcriptional regulator compare
NOLOHH_02510 skp -1.2 -1.6 molecular chaperone Skp compare
NOLOHH_11365 rpiA -1.1 -1.9 ribose-5-phosphate isomerase RpiA compare
NOLOHH_19320 ydcH -1.1 -1.0 Uncharacterized protein YdcH compare
NOLOHH_05965 pfkA -1.1 -3.0 6-phosphofructokinase compare
NOLOHH_20505 narJ -1.1 -1.3 nitrate reductase molybdenum cofactor assembly chaperone compare
NOLOHH_01270 clpP -1.1 -2.4 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_24475 -1.1 -1.1 pilus assembly protein compare
NOLOHH_23240 tolB -1.1 -4.4 Tol-Pal system protein TolB compare
NOLOHH_19780 -1.1 -1.4 hypothetical protein compare
NOLOHH_23245 tolA -1.1 -3.2 cell envelope integrity protein TolA compare
NOLOHH_00525 -1.1 -1.0 Tail tube terminator protein compare
NOLOHH_17530 ybcI -1.1 -1.8 metal-dependent hydrolase compare
NOLOHH_06695 rffG -1.0 -6.5 dTDP-glucose 4,6-dehydratase compare
NOLOHH_22285 artQ -1.0 -1.5 arginine ABC transporter permease ArtQ compare
NOLOHH_23865 -1.0 -1.3 hypothetical protein compare
NOLOHH_14475 nuoE -1.0 -1.5 NADH-quinone oxidoreductase subunit NuoE compare
NOLOHH_11650 Gly_trna -1.0 -0.9 tRNA-Gly(ccc) compare
NOLOHH_23485 seqA -1.0 -1.3 replication initiation negative regulator SeqA compare
NOLOHH_20050 ycjQ -1.0 -2.1 D-guloside 3-dehydrogenase compare
NOLOHH_14115 evgL -1.0 -1.1 Protein EvgL compare
NOLOHH_23250 tolR -1.0 -2.3 colicin uptake protein TolR compare
NOLOHH_03090 sgrT -1.0 -3.1 Putative inhibitor of glucose uptake transporter SgrT compare
NOLOHH_07435 spoT -1.0 -1.8 bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase compare
NOLOHH_15485 yegS -1.0 -2.1 lipid kinase YegS compare
NOLOHH_19110 nhoA -1.0 -1.5 N-hydroxyarylamine O-acetyltransferase compare
NOLOHH_18965 ddpB -1.0 -1.6 putative D,D-dipeptide transport system permease protein DdpB compare
NOLOHH_09730 ptsN -1.0 -2.2 PTS IIA-like nitrogen regulatory protein PtsN compare
NOLOHH_10890 -1.0 -1.7 phosphopantetheine attachment site family protein compare
NOLOHH_23255 tolQ -1.0 -1.1 Tol-Pal system protein TolQ compare
NOLOHH_21660 etp -1.0 -3.7 protein-tyrosine-phosphatase Etp compare
NOLOHH_20915 phoP -1.0 -1.4 two-component system response regulator PhoP compare
NOLOHH_20795 ycgJ -1.0 -1.3 Uncharacterized protein YcgJ compare
NOLOHH_02580 glnD -1.0 -1.1 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
NOLOHH_14470 nuoC -1.0 -2.9 NADH-quinone oxidoreductase subunit C/D compare
NOLOHH_16635 yecM -0.9 -2.0 VOC family protein compare
NOLOHH_00615 quuD -0.9 -0.9 antitermination protein QuuD compare
NOLOHH_23320 sdhB -0.9 -3.5 succinate dehydrogenase iron-sulfur subunit SdhB compare
NOLOHH_20820 ymgG -0.9 -0.9 UPF0757 protein YmgG compare
NOLOHH_20440 ychT -0.9 -1.1 Protein YchT compare
NOLOHH_14950 yejF -0.9 -2.2 microcin C ABC transporter ATP-binding protein YejF compare
NOLOHH_14305 truA -0.9 -2.8 tRNA pseudouridine(38-40) synthase TruA compare
NOLOHH_24025 hokE -0.9 -2.5 type I toxin-antitoxin system toxin HokE compare
NOLOHH_11515 lysS -0.9 -1.6 lysine--tRNA ligase compare
NOLOHH_20660 dhaR -0.9 -2.7 dihydroxyacetone kinase operon transcriptional regulator DhaR compare
NOLOHH_11120 yggT -0.9 -0.9 osmotic shock tolerance protein YggT compare
NOLOHH_22075 pflA -0.9 -1.6 pyruvate formate lyase 1-activating protein compare
NOLOHH_13720 eutN -0.9 -1.2 ethanolamine utilization microcompartment protein EutN compare
NOLOHH_08775 -0.9 -2.6 NfuA family Fe-S biogenesis protein compare
NOLOHH_16855 kdgA -0.9 -1.3 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
NOLOHH_03595 osmY -0.9 -3.1 molecular chaperone OsmY compare
NOLOHH_01185 ybaY -0.9 -2.6 Uncharacterized lipoprotein YbaY compare
NOLOHH_01200 glnK -0.9 -2.5 P-II family nitrogen regulator compare
NOLOHH_22795 -0.9 -0.8 toxin-antitoxin system HicB family antitoxin compare
NOLOHH_24835 traK -0.9 -1.9 type-F conjugative transfer system secretin TraK compare
NOLOHH_02690 dksA -0.9 -1.9 RNA polymerase-binding protein DksA compare
NOLOHH_17170 insQ -0.9 -0.8 Putative RNA-guided DNA endonuclease InsQ compare
NOLOHH_21655 gfcE -0.9 -3.5 Putative polysaccharide export protein GfcE compare
NOLOHH_21130 yceD -0.9 -1.9 23S rRNA accumulation protein YceD compare
NOLOHH_24460 -0.9 -1.1 LngX2 compare
NOLOHH_03055 leuL -0.9 -3.1 leu operon leader peptide compare
NOLOHH_13545 -0.9 -2.0 Hydrogenase 4 membrane subunit compare
NOLOHH_19635 -0.8 -1.0 hypothetical protein compare
NOLOHH_14510 nuoL -0.8 -3.2 NADH-quinone oxidoreductase subunit L compare
NOLOHH_14120 emrK -0.8 -2.4 multidrug efflux MFS transporter periplasmic adaptor subunit EmrK compare
NOLOHH_16305 fliN -0.8 -1.3 flagellar motor switch protein FliN compare
NOLOHH_15015 fruB -0.8 -3.6 fused PTS fructose transporter subunit IIA/HPr protein compare
NOLOHH_24620 -0.8 -1.8 ISSfl4 ORF1 compare
NOLOHH_06300 dsbA -0.8 -1.7 thiol:disulfide interchange protein DsbA compare
NOLOHH_20485 Tyr_trna -0.8 -1.0 tRNA-Tyr(gta) compare
NOLOHH_04525 miaA -0.8 -0.6 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
NOLOHH_16130 shiA -0.8 -2.5 shikimate transporter compare
NOLOHH_18375 -0.8 -1.5 Ybl78 compare
NOLOHH_09355 aroE -0.8 -4.0 shikimate dehydrogenase compare
NOLOHH_11770 yqeL -0.8 -1.2 Uncharacterized protein YqeL compare
NOLOHH_12905 -0.8 -1.3 Leader peptide of chorismate mutase-P-prephenate dehydratase compare
NOLOHH_19785 -0.8 -0.9 DUF977 domain-containing protein compare
NOLOHH_24570 -0.8 -1.2 Alpha/beta hydrolase compare
NOLOHH_13355 ndk -0.8 -1.7 nucleoside-diphosphate kinase compare
NOLOHH_18085 ydgT -0.8 -2.0 transcription modulator YdgT compare
NOLOHH_21665 etk -0.8 -5.1 tyrosine-protein kinase compare
NOLOHH_19080 narU -0.8 -1.8 nitrate/nitrite transporter NarU compare
NOLOHH_20635 dauA -0.8 -1.9 C4-dicarboxylic acid transporter DauA compare
NOLOHH_16880 -0.8 -1.2 hypothetical protein compare
NOLOHH_15650 wcaB -0.8 -2.2 colanic acid biosynthesis acetyltransferase WcaB compare
NOLOHH_19640 -0.8 -1.7 Phage tail tube protein compare
NOLOHH_07870 baxL -0.8 -1.1 Putative translational regulatory protein BaxL compare
NOLOHH_02485 rnhB -0.8 -1.3 ribonuclease HII compare
NOLOHH_14160 Arg_trna -0.7 -1.8 tRNA-Arg(cct) compare
NOLOHH_14460 nuoA -0.7 -1.3 NADH-quinone oxidoreductase subunit NuoA compare
NOLOHH_12635 ygaZ -0.7 -4.2 L-valine exporter subunit YgaZ compare
NOLOHH_20295 rluB -0.7 -1.8 23S rRNA pseudouridine(2605) synthase RluB compare
NOLOHH_13900 ypeB -0.7 -1.5 Uncharacterized protein YpeB compare
NOLOHH_17805 lpp -0.7 -1.7 murein lipoprotein Lpp compare
NOLOHH_17675 ydiT -0.7 -1.0 Ferredoxin-like protein YdiT compare
NOLOHH_01000 cueR -0.7 -2.6 Cu(I)-responsive transcriptional regulator compare
NOLOHH_07640 cysE -0.7 -0.8 serine O-acetyltransferase compare
NOLOHH_13480 arsC -0.7 -1.4 arsenate reductase (glutaredoxin) compare
NOLOHH_07630 secB -0.7 -1.4 protein-export chaperone SecB compare
NOLOHH_21145 rluC -0.7 -3.5 23S rRNA pseudouridine(955/2504/2580) synthase RluC compare
NOLOHH_04645 -0.7 -1.3 Entericidin A compare
NOLOHH_07610 envC -0.7 -4.4 murein hydrolase activator EnvC compare
NOLOHH_21490 efeU -0.7 -0.8 Ferrous iron permease EfeU compare
NOLOHH_18155 fumC -0.7 -1.1 class II fumarate hydratase compare
NOLOHH_00015 -0.7 -4.6 Type IV secretion system protein virB1 compare
NOLOHH_13060 rseB -0.7 -2.5 sigma-E factor regulatory protein RseB compare
NOLOHH_18115 hdhA -0.7 -0.7 7-alpha-hydroxysteroid dehydrogenase compare
NOLOHH_20725 dadA -0.7 -2.2 D-amino acid dehydrogenase compare
NOLOHH_17930 mepH -0.7 -1.2 Murein DD-endopeptidase MepH compare
NOLOHH_13300 iscA -0.7 -1.2 iron-sulfur cluster assembly protein IscA compare
NOLOHH_09080 yheV -0.7 -1.1 Uncharacterized protein YheV compare
NOLOHH_17880 mdtK -0.7 -1.6 multidrug efflux MATE transporter MdtK compare
NOLOHH_13790 yfeZ -0.7 -1.9 Inner membrane protein YfeZ compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms