Experiment set3S344 for Escherichia coli ECOR27

Compare to:

Bas21

200 most important genes:

  gene name fitness t score description  
NOLOHH_06715 wecA -8.2 -16.8 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
NOLOHH_07565 rfaL -8.1 -5.6 O-antigen ligase RfaL compare
NOLOHH_07555 rfaJ -7.9 -5.4 glucosyltransferase compare
NOLOHH_07560 rfaB -7.6 -5.3 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
NOLOHH_15730 -7.3 -8.7 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
NOLOHH_07545 waaO -6.9 -4.8 lipopolysaccharide 3-alpha-galactosyltransferase compare
NOLOHH_06665 wzyE -6.8 -4.7 ECA oligosaccharide polymerase compare
NOLOHH_23145 galE -6.4 -4.4 UDP-glucose 4-epimerase GalE compare
NOLOHH_09845 greA -6.1 -2.3 transcription elongation factor GreA compare
NOLOHH_23480 pgm -5.8 -4.0 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_06675 wzxE -5.7 -3.9 lipid III flippase WzxE compare
NOLOHH_06395 rfaH -4.6 -8.7 transcription/translation regulatory transformer protein RfaH compare
NOLOHH_07535 rfaG -4.2 -8.1 Lipopolysaccharide core biosynthesis protein RfaG compare
NOLOHH_20460 galU -4.2 -2.9 UTP--glucose-1-phosphate uridylyltransferase GalU compare
NOLOHH_09835 obgE -3.9 -2.1 GTPase ObgE compare
NOLOHH_07575 rfaF -3.7 -2.6 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_06550 xerC -3.6 -3.5 tyrosine recombinase XerC compare
NOLOHH_12805 rnfH -3.3 -3.9 RnfH family protein compare
NOLOHH_18070 rsxB -3.3 -3.3 electron transport complex subunit RsxB compare
NOLOHH_07540 rfaP -3.0 -8.2 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_18060 rsxD -3.0 -5.4 electron transport complex subunit RsxD compare
NOLOHH_04655 epmB -2.8 -2.7 EF-P beta-lysylation protein EpmB compare
NOLOHH_18120 uidR -2.8 -2.8 DNA-binding transcriptional regulator UidR compare
NOLOHH_14780 apbE -2.8 -4.9 FAD:protein FMN transferase ApbE compare
NOLOHH_02845 aceE -2.6 -3.1 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_06530 corA -2.5 -5.9 magnesium/cobalt transporter CorA compare
NOLOHH_13310 hscA -2.5 -4.3 Fe-S protein assembly chaperone HscA compare
NOLOHH_12545 recA -2.2 -3.7 recombinase RecA compare
NOLOHH_09730 ptsN -2.2 -2.4 PTS IIA-like nitrogen regulatory protein PtsN compare
NOLOHH_23510 fur -2.2 -2.2 ferric iron uptake transcriptional regulator compare
NOLOHH_07125 -2.2 -4.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_14115 evgL -2.2 -1.8 Protein EvgL compare
NOLOHH_11230 tkt -2.1 -2.0 transketolase compare
NOLOHH_13865 crr -2.1 -1.8 PTS glucose transporter subunit IIA compare
NOLOHH_03170 surA -2.0 -5.5 peptidylprolyl isomerase SurA compare
NOLOHH_14340 ubiX -2.0 -3.7 flavin prenyltransferase UbiX compare
NOLOHH_11365 rpiA -2.0 -3.5 ribose-5-phosphate isomerase RpiA compare
NOLOHH_06920 mnmG -2.0 -7.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_19535 hslJ -2.0 -2.3 heat shock protein HslJ compare
NOLOHH_04525 miaA -1.9 -2.3 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
NOLOHH_23310 odhB -1.8 -1.7 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
NOLOHH_19260 hicB -1.8 -1.6 type II toxin-antitoxin system antitoxin HicB compare
NOLOHH_18755 yneJ -1.7 -2.3 Uncharacterized HTH-type transcriptional regulator YneJ compare
NOLOHH_17160 yeaR -1.7 -1.5 Uncharacterized protein YeaR compare
NOLOHH_05490 hupA -1.6 -1.5 DNA-binding protein HU-alpha compare
NOLOHH_01270 clpP -1.6 -3.7 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_13075 lepA -1.6 -4.0 translation elongation factor 4 compare
NOLOHH_17270 yeaC -1.5 -3.0 Uncharacterized protein YeaC compare
NOLOHH_20670 dhaL -1.5 -1.3 dihydroxyacetone kinase subunit DhaL compare
NOLOHH_17555 pfkB -1.5 -1.3 6-phosphofructokinase II compare
NOLOHH_17975 sodC -1.5 -1.5 superoxide dismutase [Cu-Zn] SodC compare
NOLOHH_13070 rseC -1.5 -4.3 SoxR-reducing system protein RseC compare
NOLOHH_07710 yibG -1.5 -1.2 Uncharacterized protein YibG compare
NOLOHH_12800 ratA -1.5 -1.6 type II toxin-antitoxin system toxin RatA compare
NOLOHH_16030 -1.4 -1.7 cobalamin biosynthesis protein compare
NOLOHH_18065 rsxC -1.4 -3.7 electron transport complex subunit RsxC compare
NOLOHH_00445 -1.4 -2.1 peptidyl-arginine deiminase compare
NOLOHH_15735 galF -1.3 -1.8 UTP--glucose-1-phosphate uridylyltransferase GalF compare
NOLOHH_20735 fadR -1.3 -1.3 fatty acid metabolism transcriptional regulator FadR compare
NOLOHH_20915 phoP -1.3 -1.6 two-component system response regulator PhoP compare
NOLOHH_13055 rseA -1.3 -2.0 anti-sigma-E factor RseA compare
NOLOHH_06110 -1.3 -1.5 hypothetical protein compare
NOLOHH_16620 yecT -1.3 -1.4 Uncharacterized protein YecT compare
NOLOHH_16190 hiuH -1.3 -2.3 hydroxyisourate hydrolase compare
NOLOHH_24570 -1.3 -1.8 Alpha/beta hydrolase compare
NOLOHH_08375 pitA -1.3 -5.8 inorganic phosphate transporter PitA compare
NOLOHH_21130 yceD -1.3 -1.7 23S rRNA accumulation protein YceD compare
NOLOHH_13300 iscA -1.2 -2.4 iron-sulfur cluster assembly protein IscA compare
NOLOHH_03375 dnaJ -1.2 -0.9 molecular chaperone DnaJ compare
NOLOHH_14300 usg -1.2 -3.0 aspartate-semialdehyde dehydrogenase compare
NOLOHH_05965 pfkA -1.2 -4.0 6-phosphofructokinase compare
NOLOHH_21205 flgB -1.2 -1.2 flagellar basal body rod protein FlgB compare
NOLOHH_13035 srmB -1.2 -6.1 ATP-dependent RNA helicase SrmB compare
NOLOHH_11360 yqfE -1.2 -1.9 Putative protein YqfE compare
NOLOHH_14500 nuoJ -1.2 -3.8 NADH-quinone oxidoreductase subunit J compare
NOLOHH_03190 apaH -1.2 -5.4 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_19485 paaB -1.2 -1.4 1,2-phenylacetyl-CoA epoxidase subunit B compare
NOLOHH_18915 yddB -1.2 -1.6 Uncharacterized protein YddB compare
NOLOHH_16015 pduF -1.2 -1.3 propanediol diffusion facilitator PduF compare
NOLOHH_00525 -1.2 -1.2 Tail tube terminator protein compare
NOLOHH_16290 fliQ -1.1 -1.6 flagellar biosynthesis protein FliQ compare
NOLOHH_20080 pspD -1.1 -0.9 phage shock protein PspD compare
NOLOHH_19040 adhP -1.1 -2.7 alcohol dehydrogenase AdhP compare
NOLOHH_08720 glpD -1.1 -4.9 glycerol-3-phosphate dehydrogenase compare
NOLOHH_21200 flgC -1.1 -2.1 flagellar basal body rod protein FlgC compare
NOLOHH_06250 hemN -1.0 -6.6 oxygen-independent coproporphyrinogen III oxidase compare
NOLOHH_17480 chbC -1.0 -2.3 PTS N,N'-diacetylchitobiose transporter subunit IIC compare
NOLOHH_02390 gmhB -1.0 -1.5 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase compare
NOLOHH_05935 yiiR -1.0 -2.1 Uncharacterized protein YiiR compare
NOLOHH_11690 -1.0 -1.1 flhB HrpN YscU SpaS family protein compare
NOLOHH_01200 glnK -1.0 -2.9 P-II family nitrogen regulator compare
NOLOHH_11490 fldB -1.0 -4.9 flavodoxin FldB compare
NOLOHH_06245 -1.0 -3.1 Uncharacterized protein YshB compare
NOLOHH_01245 ppiD -1.0 -1.7 peptidylprolyl isomerase compare
NOLOHH_20550 chaC -1.0 -1.5 glutathione-specific gamma-glutamylcyclotransferase compare
NOLOHH_18010 mliC -1.0 -1.1 C-type lysozyme inhibitor compare
NOLOHH_14520 nuoN -1.0 -3.2 NADH-quinone oxidoreductase subunit NuoN compare
NOLOHH_21305 mdtG -1.0 -2.5 multidrug efflux MFS transporter MdtG compare
NOLOHH_07955 yiaG -1.0 -2.0 HTH-type transcriptional regulator compare
NOLOHH_20750 umuC -0.9 -1.7 DNA polymerase V catalytic protein compare
NOLOHH_18050 rsxE -0.9 -2.0 electron transport complex subunit RsxE compare
NOLOHH_20295 rluB -0.9 -2.5 23S rRNA pseudouridine(2605) synthase RluB compare
NOLOHH_17325 sppA -0.9 -3.7 signal peptide peptidase SppA compare
NOLOHH_09695 arcB -0.9 -3.5 aerobic respiration two-component sensor histidine kinase ArcB compare
NOLOHH_24215 traA -0.9 -2.6 type IV conjugative transfer system pilin TraA compare
NOLOHH_18325 -0.9 -1.4 DNA-binding protein compare
NOLOHH_11770 yqeL -0.9 -1.5 Uncharacterized protein YqeL compare
NOLOHH_02825 acnB -0.9 -1.5 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
NOLOHH_19010 gntT -0.9 -1.5 transporter compare
NOLOHH_08775 -0.9 -3.2 NfuA family Fe-S biogenesis protein compare
NOLOHH_11650 Gly_trna -0.9 -0.9 tRNA-Gly(ccc) compare
NOLOHH_16355 yedK -0.9 -1.5 Abasic site processing protein YedK compare
NOLOHH_13320 iscX -0.9 -1.2 Fe-S cluster assembly protein IscX compare
NOLOHH_21450 pgaB -0.9 -1.0 poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB compare
NOLOHH_07015 pstC -0.9 -2.0 phosphate ABC transporter permease PstC compare
NOLOHH_22435 dgcI -0.9 -1.6 putative diguanylate cyclase DgcI compare
NOLOHH_14485 nuoG -0.9 -3.7 NADH-quinone oxidoreductase subunit NuoG compare
NOLOHH_18730 marC -0.9 -1.0 NAAT family transporter MarC compare
NOLOHH_00385 -0.8 -2.2 hypothetical protein compare
NOLOHH_23545 nagA -0.8 -4.6 N-acetylglucosamine-6-phosphate deacetylase compare
NOLOHH_06385 fre -0.8 -4.9 NAD(P)H-flavin reductase compare
NOLOHH_11415 pepP -0.8 -3.2 Xaa-Pro aminopeptidase compare
NOLOHH_07870 baxL -0.8 -1.4 Putative translational regulatory protein BaxL compare
NOLOHH_23240 tolB -0.8 -4.0 Tol-Pal system protein TolB compare
NOLOHH_14450 lrhA -0.8 -5.2 transcriptional regulator LrhA compare
NOLOHH_19675 -0.8 -1.1 DUF6651 domain-containing protein compare
NOLOHH_13590 purC -0.8 -2.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
NOLOHH_08495 yhhL -0.8 -0.9 DUF1145 domain-containing protein compare
NOLOHH_17305 ydjF -0.8 -1.3 Uncharacterized HTH-type transcriptional regulator YdjF compare
NOLOHH_14505 nuoK -0.8 -2.3 NADH-quinone oxidoreductase subunit NuoK compare
NOLOHH_23245 tolA -0.8 -2.4 cell envelope integrity protein TolA compare
NOLOHH_17175 yeaQ -0.8 -1.4 UPF0410 protein YeaQ compare
NOLOHH_09905 nusA -0.8 -1.8 Transcription termination/antitermination protein NusA compare
NOLOHH_02455 rof -0.8 -3.1 Rho-binding antiterminator compare
NOLOHH_14595 arnT -0.8 -1.6 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase compare
NOLOHH_24185 tfa -0.8 -1.9 Tail fiber assembly protein compare
NOLOHH_21380 cgsE -0.8 -0.8 curli production assembly/transport protein CsgE compare
NOLOHH_14470 nuoC -0.8 -2.9 NADH-quinone oxidoreductase subunit C/D compare
NOLOHH_24530 -0.8 -2.6 HTH-21 domain-containing protein compare
NOLOHH_07530 rfaQ -0.8 -4.1 lipopolysaccharide core heptosyltransferase RfaQ compare
NOLOHH_09955 deaD -0.8 -2.4 ATP-dependent RNA helicase DeaD compare
NOLOHH_04165 treC -0.8 -2.7 alpha,alpha-phosphotrehalase compare
NOLOHH_17630 btuD -0.8 -0.9 vitamin B12 ABC transporter ATP-binding protein BtuD compare
NOLOHH_16855 kdgA -0.8 -1.4 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
NOLOHH_11790 yqeH -0.8 -1.9 Uncharacterized protein YqeH compare
NOLOHH_16505 ftnB -0.8 -1.0 non-heme ferritin-like protein compare
NOLOHH_06915 mioC -0.8 -3.3 FMN-binding protein MioC compare
NOLOHH_16095 -0.8 -1.9 integrase arm-type DNA-binding domain-containing protein compare
NOLOHH_14420 yfbV -0.8 -1.3 UPF0208 membrane protein YfbV compare
NOLOHH_15220 yohO -0.8 -0.8 protein YohO compare
NOLOHH_21510 rutR -0.8 -3.6 HTH-type transcriptional regulator RutR compare
NOLOHH_01535 proC -0.8 -4.4 pyrroline-5-carboxylate reductase compare
NOLOHH_18965 ddpB -0.7 -1.6 putative D,D-dipeptide transport system permease protein DdpB compare
NOLOHH_06220 typA -0.7 -5.9 ribosome-dependent GTPase TypA compare
NOLOHH_17810 pykF -0.7 -1.5 pyruvate kinase PykF compare
NOLOHH_15975 pduJ -0.7 -1.0 propanediol utilization microcompartment protein PduJ compare
NOLOHH_00135 -0.7 -2.1 hypothetical protein compare
NOLOHH_20745 dsbB -0.7 -2.3 disulfide bond formation protein DsbB compare
NOLOHH_05830 metJ -0.7 -1.1 met regulon transcriptional regulator MetJ compare
NOLOHH_22985 -0.7 -1.2 antitermination protein N compare
NOLOHH_13390 bamB -0.7 -3.3 outer membrane protein assembly factor BamB compare
NOLOHH_17455 cho -0.7 -1.7 excinuclease Cho compare
NOLOHH_07425 recG -0.7 -4.9 ATP-dependent DNA helicase RecG compare
NOLOHH_04765 yjdJ -0.7 -1.6 Uncharacterized protein YjdJ compare
NOLOHH_14305 truA -0.7 -3.0 tRNA pseudouridine(38-40) synthase TruA compare
NOLOHH_21940 aspC -0.7 -1.1 aspartate transaminase compare
NOLOHH_14885 dsbE -0.7 -2.6 thiol:disulfide interchange protein DsbE compare
NOLOHH_03330 -0.7 -0.6 T3SS effector EspX compare
NOLOHH_10655 qseC -0.7 -4.1 two-component system sensor histidine kinase QseC compare
NOLOHH_19515 ydbL -0.7 -1.2 Uncharacterized protein YdbL compare
NOLOHH_19790 -0.7 -1.3 phage replisome organizer compare
NOLOHH_06810 hdfR -0.7 -5.3 HTH-type transcriptional regulator HdfR compare
NOLOHH_17220 yeaK -0.7 -0.7 mischarged aminoacyl-tRNA deacylase compare
NOLOHH_16425 yecC -0.7 -1.8 L-cystine ABC transporter ATP-binding protein YecC compare
NOLOHH_09355 aroE -0.7 -3.4 shikimate dehydrogenase compare
NOLOHH_04490 nsrR -0.7 -3.6 nitric oxide-sensing transcriptional repressor NsrR compare
NOLOHH_05200 yjbM -0.7 -2.1 Uncharacterized protein YjbM compare
NOLOHH_15970 -0.7 -1.2 microcompartment protein compare
NOLOHH_06590 cyaA -0.7 -3.9 class I adenylate cyclase compare
NOLOHH_18980 ddpF -0.7 -1.1 putative D,D-dipeptide transport ATP-binding protein DdpF compare
NOLOHH_18315 rspB -0.7 -1.3 Zn-dependent oxidoreductase compare
NOLOHH_20690 ymgE -0.7 -1.2 UPF0410 protein YmgE compare
NOLOHH_03600 prfC -0.7 -4.9 peptide chain release factor 3 compare
NOLOHH_22285 artQ -0.7 -1.5 arginine ABC transporter permease ArtQ compare
NOLOHH_13060 rseB -0.7 -2.7 sigma-E factor regulatory protein RseB compare
NOLOHH_19430 paaY -0.7 -1.0 phenylacetic acid degradation protein PaaY compare
NOLOHH_20025 ycjV -0.7 -2.0 Uncharacterized ABC transporter ATP-binding protein YcjV compare
NOLOHH_20375 tonB -0.7 -1.7 TonB system transport protein TonB compare
NOLOHH_14410 pta -0.7 -0.8 phosphate acetyltransferase compare
NOLOHH_07010 pstS -0.7 -3.8 phosphate ABC transporter substrate-binding protein PstS compare
NOLOHH_13185 glyA -0.7 -2.8 serine hydroxymethyltransferase compare
NOLOHH_06300 dsbA -0.6 -1.8 thiol:disulfide interchange protein DsbA compare
NOLOHH_04645 -0.6 -1.8 Entericidin A compare
NOLOHH_24695 vapB -0.6 -1.3 toxin-antitoxin system antitoxin VapB compare
NOLOHH_19505 feaB -0.6 -2.1 phenylacetaldehyde dehydrogenase compare
NOLOHH_06150 csqR -0.6 -4.2 HTH-type transcriptional repressor CsqR compare
NOLOHH_12925 rluD -0.6 -4.4 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
NOLOHH_09530 rng -0.6 -3.3 ribonuclease G compare
NOLOHH_14760 rcsB -0.6 -1.3 transcriptional regulator RcsB compare
NOLOHH_20440 ychT -0.6 -1.0 Protein YchT compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms