Experiment set3S343 for Escherichia coli ECOR27

Compare to:

Bas21

200 most important genes:

  gene name fitness t score description  
NOLOHH_06715 wecA -8.1 -11.2 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
NOLOHH_07565 rfaL -7.6 -5.2 O-antigen ligase RfaL compare
NOLOHH_07555 rfaJ -7.3 -5.1 glucosyltransferase compare
NOLOHH_15730 -7.2 -5.0 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
NOLOHH_07560 rfaB -7.1 -4.9 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
NOLOHH_07545 waaO -6.4 -4.4 lipopolysaccharide 3-alpha-galactosyltransferase compare
NOLOHH_06665 wzyE -6.3 -4.4 ECA oligosaccharide polymerase compare
NOLOHH_23145 galE -5.9 -4.1 UDP-glucose 4-epimerase GalE compare
NOLOHH_23480 pgm -5.3 -3.6 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_06675 wzxE -5.2 -3.6 lipid III flippase WzxE compare
NOLOHH_06395 rfaH -4.6 -10.7 transcription/translation regulatory transformer protein RfaH compare
NOLOHH_17565 yniD -4.2 -1.6 Uncharacterized protein YniD compare
NOLOHH_18060 rsxD -4.2 -5.0 electron transport complex subunit RsxD compare
NOLOHH_07535 rfaG -4.1 -6.2 Lipopolysaccharide core biosynthesis protein RfaG compare
NOLOHH_19260 hicB -3.8 -2.0 type II toxin-antitoxin system antitoxin HicB compare
NOLOHH_20460 galU -3.8 -2.6 UTP--glucose-1-phosphate uridylyltransferase GalU compare
NOLOHH_14475 nuoE -3.3 -3.4 NADH-quinone oxidoreductase subunit NuoE compare
NOLOHH_09845 greA -3.3 -2.1 transcription elongation factor GreA compare
NOLOHH_14780 apbE -3.1 -5.4 FAD:protein FMN transferase ApbE compare
NOLOHH_21380 cgsE -3.0 -1.6 curli production assembly/transport protein CsgE compare
NOLOHH_04655 epmB -3.0 -2.0 EF-P beta-lysylation protein EpmB compare
NOLOHH_11495 xerD -2.8 -2.7 site-specific tyrosine recombinase XerD compare
NOLOHH_07540 rfaP -2.8 -6.1 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_20200 yciT -2.6 -2.5 DNA-binding transcriptional regulator YciT compare
NOLOHH_07575 rfaF -2.6 -2.5 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_02390 gmhB -2.5 -2.4 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase compare
NOLOHH_18070 rsxB -2.4 -2.3 electron transport complex subunit RsxB compare
NOLOHH_13320 iscX -2.4 -1.8 Fe-S cluster assembly protein IscX compare
NOLOHH_10555 glgS -2.4 -2.2 cell surface composition regulator GlgS compare
NOLOHH_11515 lysS -2.4 -3.2 lysine--tRNA ligase compare
NOLOHH_17055 -2.2 -2.3 Cytoplasmic protein compare
NOLOHH_12800 ratA -2.1 -2.2 type II toxin-antitoxin system toxin RatA compare
NOLOHH_23510 fur -2.1 -3.0 ferric iron uptake transcriptional regulator compare
NOLOHH_14115 evgL -2.1 -1.6 Protein EvgL compare
NOLOHH_17190 yoaF -2.1 -1.3 DUF333 domain-containing protein compare
NOLOHH_13070 rseC -2.1 -4.9 SoxR-reducing system protein RseC compare
NOLOHH_06920 mnmG -2.1 -6.3 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_13055 rseA -2.0 -2.4 anti-sigma-E factor RseA compare
NOLOHH_21130 yceD -2.0 -2.2 23S rRNA accumulation protein YceD compare
NOLOHH_13185 glyA -1.9 -5.6 serine hydroxymethyltransferase compare
NOLOHH_00445 -1.9 -4.1 peptidyl-arginine deiminase compare
NOLOHH_14810 yojO -1.9 -1.2 Uncharacterized protein YojO compare
NOLOHH_13310 hscA -1.9 -3.5 Fe-S protein assembly chaperone HscA compare
NOLOHH_13075 lepA -1.8 -4.8 translation elongation factor 4 compare
NOLOHH_17170 insQ -1.8 -1.2 Putative RNA-guided DNA endonuclease InsQ compare
NOLOHH_01270 clpP -1.8 -3.2 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_16015 pduF -1.8 -1.7 propanediol diffusion facilitator PduF compare
NOLOHH_04525 miaA -1.8 -1.3 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
NOLOHH_02580 glnD -1.8 -1.7 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
NOLOHH_11670 escR -1.7 -1.5 EscR/YscR/HrcR family type III secretion system export apparatus protein compare
NOLOHH_02845 aceE -1.7 -2.6 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_23865 -1.7 -1.6 hypothetical protein compare
NOLOHH_00405 hipB -1.7 -1.5 XRE family transcriptional regulator compare
NOLOHH_24820 -1.7 -1.6 Conjugal transfer protein TrbD compare
NOLOHH_14505 nuoK -1.7 -2.5 NADH-quinone oxidoreductase subunit NuoK compare
NOLOHH_23485 seqA -1.7 -1.9 replication initiation negative regulator SeqA compare
NOLOHH_17515 cedA -1.6 -1.0 cell division activator CedA compare
NOLOHH_19995 tpx -1.6 -1.5 thiol peroxidase compare
NOLOHH_12805 rnfH -1.6 -2.1 RnfH family protein compare
NOLOHH_19215 ydcY -1.6 -1.5 Uncharacterized protein YdcY compare
NOLOHH_11690 -1.6 -1.3 flhB HrpN YscU SpaS family protein compare
NOLOHH_20250 ymiC -1.5 -1.6 Protein YmiC compare
NOLOHH_06550 xerC -1.5 -1.6 tyrosine recombinase XerC compare
NOLOHH_11230 tkt -1.5 -2.6 transketolase compare
NOLOHH_06300 dsbA -1.5 -3.4 thiol:disulfide interchange protein DsbA compare
NOLOHH_15160 yohP -1.5 -1.2 protein YohP compare
NOLOHH_07125 -1.5 -3.2 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_14340 ubiX -1.4 -2.6 flavin prenyltransferase UbiX compare
NOLOHH_05830 metJ -1.4 -1.1 met regulon transcriptional regulator MetJ compare
NOLOHH_23310 odhB -1.4 -1.3 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
NOLOHH_01170 ybaA -1.4 -1.0 Uncharacterized protein YbaA compare
NOLOHH_17115 fadD -1.4 -1.8 long-chain-fatty-acid--CoA ligase FadD compare
NOLOHH_07955 yiaG -1.3 -2.3 HTH-type transcriptional regulator compare
NOLOHH_16275 dsrB -1.3 -1.2 protein DsrB compare
NOLOHH_19580 sitD -1.3 -1.4 iron/manganese ABC transporter permease subunit SitD compare
NOLOHH_20505 narJ -1.3 -1.4 nitrate reductase molybdenum cofactor assembly chaperone compare
NOLOHH_03170 surA -1.3 -2.5 peptidylprolyl isomerase SurA compare
NOLOHH_19535 hslJ -1.2 -1.6 heat shock protein HslJ compare
NOLOHH_08900 aroK -1.2 -1.2 shikimate kinase AroK compare
NOLOHH_13035 srmB -1.2 -5.1 ATP-dependent RNA helicase SrmB compare
NOLOHH_03190 apaH -1.2 -4.8 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_18145 manA -1.2 -1.6 mannose-6-phosphate isomerase compare
NOLOHH_20185 rnb -1.2 -2.5 exoribonuclease II compare
NOLOHH_20465 rssB -1.2 -1.9 two-component system response regulator RssB compare
NOLOHH_18010 mliC -1.2 -1.5 C-type lysozyme inhibitor compare
NOLOHH_13990 ypeD -1.2 -1.9 Protein YpeD compare
NOLOHH_19780 -1.2 -1.2 hypothetical protein compare
NOLOHH_11425 ubiI -1.2 -1.7 FAD-dependent 2-octaprenylphenol hydroxylase compare
NOLOHH_19960 mppA -1.2 -1.5 murein tripeptide ABC transporter substrate-binding protein MppA compare
NOLOHH_09875 secG -1.2 -1.4 preprotein translocase subunit SecG compare
NOLOHH_13865 crr -1.2 -1.2 PTS glucose transporter subunit IIA compare
NOLOHH_02185 ydcD -1.1 -0.8 Uncharacterized protein YdcD compare
NOLOHH_20380 yciI -1.1 -0.8 YciI family protein compare
NOLOHH_15000 yeiW -1.1 -1.7 UPF0153 protein YeiW compare
NOLOHH_09955 deaD -1.1 -2.2 ATP-dependent RNA helicase DeaD compare
NOLOHH_11415 pepP -1.1 -3.8 Xaa-Pro aminopeptidase compare
NOLOHH_19320 ydcH -1.1 -1.3 Uncharacterized protein YdcH compare
NOLOHH_12165 -1.1 -0.9 LemA family compare
NOLOHH_18325 -1.1 -1.4 DNA-binding protein compare
NOLOHH_20050 ycjQ -1.1 -2.6 D-guloside 3-dehydrogenase compare
NOLOHH_08375 pitA -1.1 -3.6 inorganic phosphate transporter PitA compare
NOLOHH_14465 nuoB -1.1 -3.4 NADH-quinone oxidoreductase subunit NuoB compare
NOLOHH_19195 mcbR -1.1 -1.0 colanic acid/biofilm transcriptional regulator McbR compare
NOLOHH_07550 rfaY -1.0 -2.1 lipopolysaccharide core heptose(II) kinase RfaY compare
NOLOHH_06385 fre -1.0 -4.4 NAD(P)H-flavin reductase compare
NOLOHH_14760 rcsB -1.0 -1.6 transcriptional regulator RcsB compare
NOLOHH_07710 yibG -1.0 -0.9 Uncharacterized protein YibG compare
NOLOHH_14460 nuoA -1.0 -1.5 NADH-quinone oxidoreductase subunit NuoA compare
NOLOHH_20915 phoP -1.0 -1.3 two-component system response regulator PhoP compare
NOLOHH_19510 feaR -1.0 -1.6 transcriptional regulator FeaR compare
NOLOHH_20420 oppA -1.0 -2.9 oligopeptide ABC transporter substrate-binding protein OppA compare
NOLOHH_18255 clcB -1.0 -1.4 voltage-gated ClC-type chloride channel ClcB compare
NOLOHH_15735 galF -1.0 -1.9 UTP--glucose-1-phosphate uridylyltransferase GalF compare
NOLOHH_09695 arcB -1.0 -3.7 aerobic respiration two-component sensor histidine kinase ArcB compare
NOLOHH_09730 ptsN -1.0 -1.5 PTS IIA-like nitrogen regulatory protein PtsN compare
NOLOHH_18065 rsxC -1.0 -2.9 electron transport complex subunit RsxC compare
NOLOHH_14500 nuoJ -1.0 -2.9 NADH-quinone oxidoreductase subunit J compare
NOLOHH_12545 recA -1.0 -1.3 recombinase RecA compare
NOLOHH_14300 usg -1.0 -2.4 aspartate-semialdehyde dehydrogenase compare
NOLOHH_09940 pnp -1.0 -4.9 polyribonucleotide nucleotidyltransferase compare
NOLOHH_21490 efeU -1.0 -1.5 Ferrous iron permease EfeU compare
NOLOHH_16595 cheY -0.9 -2.3 chemotaxis regulatory protein CheY compare
NOLOHH_20375 tonB -0.9 -1.8 TonB system transport protein TonB compare
NOLOHH_23980 fepE -0.9 -1.8 LPS O-antigen length regulator compare
NOLOHH_12520 srlB -0.9 -2.2 PTS glucitol/sorbitol transporter subunit IIA compare
NOLOHH_11365 rpiA -0.9 -1.7 ribose-5-phosphate isomerase RpiA compare
NOLOHH_24040 ybdJ -0.9 -1.2 Uncharacterized protein YbdJ compare
NOLOHH_15010 fruB -0.9 -2.8 fused PTS fructose transporter subunit IIA/HPr protein compare
NOLOHH_07630 secB -0.9 -1.6 protein-export chaperone SecB compare
NOLOHH_17545 yniA -0.9 -1.4 putative ketoamine kinase YniA compare
NOLOHH_16665 cmoB -0.9 -1.0 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB compare
NOLOHH_24570 -0.9 -1.0 Alpha/beta hydrolase compare
NOLOHH_18925 gadB -0.9 -0.7 glutamate decarboxylase compare
NOLOHH_04850 pmrR -0.9 -1.5 Putative membrane protein PmrR compare
NOLOHH_01905 -0.9 -1.1 Uncharacterized protein YkgH compare
NOLOHH_18155 fumC -0.9 -1.0 class II fumarate hydratase compare
NOLOHH_00385 -0.9 -2.2 hypothetical protein compare
NOLOHH_03445 -0.9 -1.7 thr operon leader peptide compare
NOLOHH_20865 bluF -0.9 -1.0 blue light-responsive regulator BluF compare
NOLOHH_08720 glpD -0.9 -3.6 glycerol-3-phosphate dehydrogenase compare
NOLOHH_18245 mlc -0.9 -1.2 DNA-binding transcriptional repressor Mlc compare
NOLOHH_13255 hcaR -0.9 -2.1 DNA-binding transcriptional regulator HcaR compare
NOLOHH_07530 rfaQ -0.9 -4.6 lipopolysaccharide core heptosyltransferase RfaQ compare
NOLOHH_09810 sfsB -0.9 -2.0 DNA-binding transcriptional regulator SfsB compare
NOLOHH_05005 ytcA -0.9 -1.2 Uncharacterized protein YtcA compare
NOLOHH_13060 rseB -0.9 -2.8 sigma-E factor regulatory protein RseB compare
NOLOHH_18115 hdhA -0.9 -1.1 7-alpha-hydroxysteroid dehydrogenase compare
NOLOHH_14470 nuoC -0.9 -3.0 NADH-quinone oxidoreductase subunit C/D compare
NOLOHH_20295 rluB -0.9 -2.5 23S rRNA pseudouridine(2605) synthase RluB compare
NOLOHH_03740 hpaI -0.9 -3.0 4-hydroxy-2-oxoheptanedioate aldolase compare
NOLOHH_23315 sucA -0.9 -0.6 2-oxoglutarate dehydrogenase E1 component compare
NOLOHH_03030 cra -0.9 -3.6 catabolite repressor/activator compare
NOLOHH_22605 ybiJ -0.9 -1.6 DUF1471 domain-containing protein compare
NOLOHH_20750 umuC -0.9 -1.4 DNA polymerase V catalytic protein compare
NOLOHH_24215 traA -0.9 -1.7 type IV conjugative transfer system pilin TraA compare
NOLOHH_19900 dgcM -0.9 -1.9 diguanylate cyclase DgcM compare
NOLOHH_16900 yobB -0.9 -2.0 Uncharacterized protein YobB compare
NOLOHH_15240 yehS -0.9 -2.9 Uncharacterized protein YehS compare
NOLOHH_18730 marC -0.9 -0.8 NAAT family transporter MarC compare
NOLOHH_21770 yccF -0.9 -2.2 YccF domain-containing protein compare
NOLOHH_16860 purT -0.8 -2.2 formate-dependent phosphoribosylglycinamide formyltransferase compare
NOLOHH_07435 spoT -0.8 -1.3 bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase compare
NOLOHH_19520 -0.8 -0.8 YnbE family lipoprotein compare
NOLOHH_19640 -0.8 -1.8 Phage tail tube protein compare
NOLOHH_17670 fadK -0.8 -1.5 medium-chain fatty-acid--CoA ligase compare
NOLOHH_18385 tnp-ISNCY -0.8 -1.8 ISNCY family transposase compare
NOLOHH_15455 gatZ -0.8 -1.2 tagatose-bisphosphate aldolase subunit GatZ compare
NOLOHH_22310 ybjO -0.8 -1.1 Inner membrane protein YbjO compare
NOLOHH_19760 -0.8 -1.5 DUF1367 domain-containing protein compare
NOLOHH_08775 -0.8 -2.2 NfuA family Fe-S biogenesis protein compare
NOLOHH_16845 zwf -0.8 -1.0 glucose-6-phosphate dehydrogenase compare
NOLOHH_15290 -0.8 -1.3 Uncharacterized protein YehK compare
NOLOHH_21675 cbdX -0.8 -1.0 cytochrome bd-II oxidase subunit CbdX compare
NOLOHH_14270 yfcL -0.8 -2.6 Uncharacterized protein YfcL compare
NOLOHH_19080 narU -0.8 -1.2 nitrate/nitrite transporter NarU compare
NOLOHH_18720 marA -0.8 -1.3 MDR efflux pump AcrAB transcriptional activator MarA compare
NOLOHH_06220 typA -0.8 -5.3 ribosome-dependent GTPase TypA compare
NOLOHH_04005 Leu_trna -0.8 -0.9 tRNA-Leu(caa) compare
NOLOHH_20410 oppC -0.8 -1.2 oligopeptide ABC transporter permease OppC compare
NOLOHH_21940 aspC -0.8 -1.2 aspartate transaminase compare
NOLOHH_19455 paaC -0.8 -1.4 3-hydroxyacyl-CoA dehydrogenase PaaC compare
NOLOHH_01440 tgt -0.8 -2.1 tRNA guanosine(34) transglycosylase Tgt compare
NOLOHH_19750 -0.8 -1.5 antiterminator compare
NOLOHH_18135 uidC -0.8 -1.8 glucuronide uptake porin UidC compare
NOLOHH_23245 tolA -0.8 -1.8 cell envelope integrity protein TolA compare
NOLOHH_17270 yeaC -0.7 -1.2 Uncharacterized protein YeaC compare
NOLOHH_11785 -0.7 -1.5 hypothetical protein compare
NOLOHH_19790 -0.7 -1.6 phage replisome organizer compare
NOLOHH_19430 paaY -0.7 -1.0 phenylacetic acid degradation protein PaaY compare
NOLOHH_13300 iscA -0.7 -0.9 iron-sulfur cluster assembly protein IscA compare
NOLOHH_19480 paaC -0.7 -2.1 phenylacetate-CoA oxygenase subunit PaaC compare
NOLOHH_23345 gltA -0.7 -3.2 citrate synthase compare
NOLOHH_06250 hemN -0.7 -4.0 oxygen-independent coproporphyrinogen III oxidase compare
NOLOHH_17675 ydiT -0.7 -0.7 Ferredoxin-like protein YdiT compare
NOLOHH_06590 cyaA -0.7 -4.2 class I adenylate cyclase compare
NOLOHH_06530 corA -0.7 -2.1 magnesium/cobalt transporter CorA compare
NOLOHH_14075 ypdI -0.7 -0.7 colanic acid biosynthesis lipoprotein YpdI compare
NOLOHH_20425 -0.7 -0.9 hypothetical protein compare
NOLOHH_15040 yeiL -0.7 -1.5 Regulatory protein YeiL compare
NOLOHH_16885 yebE -0.7 -1.6 Inner membrane protein YebE compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms