Experiment set3S319 for Escherichia coli ECOR27

Compare to:

Bas10

200 most important genes:

  gene name fitness t score description  
NOLOHH_07555 rfaJ -7.9 -5.2 glucosyltransferase compare
NOLOHH_07565 rfaL -7.7 -7.5 O-antigen ligase RfaL compare
NOLOHH_15730 -7.5 -7.4 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
NOLOHH_06715 wecA -7.2 -24.4 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
NOLOHH_07560 rfaB -7.2 -7.0 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
NOLOHH_07545 waaO -6.9 -4.8 lipopolysaccharide 3-alpha-galactosyltransferase compare
NOLOHH_23145 galE -6.4 -4.4 UDP-glucose 4-epimerase GalE compare
NOLOHH_02390 gmhB -3.8 -2.6 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase compare
NOLOHH_23480 pgm -3.7 -6.2 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_13055 rseA -3.6 -2.5 anti-sigma-E factor RseA compare
NOLOHH_00445 -3.5 -5.4 peptidyl-arginine deiminase compare
NOLOHH_12800 ratA -3.1 -2.7 type II toxin-antitoxin system toxin RatA compare
NOLOHH_23315 sucA -3.0 -2.2 2-oxoglutarate dehydrogenase E1 component compare
NOLOHH_18070 rsxB -2.9 -2.9 electron transport complex subunit RsxB compare
NOLOHH_20460 galU -2.8 -3.7 UTP--glucose-1-phosphate uridylyltransferase GalU compare
NOLOHH_03170 surA -2.7 -5.7 peptidylprolyl isomerase SurA compare
NOLOHH_13415 guaA -2.6 -2.4 glutamine-hydrolyzing GMP synthase compare
NOLOHH_07125 -2.5 -4.8 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_06675 wzxE -2.5 -6.0 lipid III flippase WzxE compare
NOLOHH_14505 nuoK -2.5 -4.1 NADH-quinone oxidoreductase subunit NuoK compare
NOLOHH_11495 xerD -2.5 -3.4 site-specific tyrosine recombinase XerD compare
NOLOHH_06395 rfaH -2.4 -4.9 transcription/translation regulatory transformer protein RfaH compare
NOLOHH_18855 fimA -2.4 -1.6 type 1 fimbrial major subunit FimA compare
NOLOHH_14500 nuoJ -2.4 -5.1 NADH-quinone oxidoreductase subunit J compare
NOLOHH_22985 -2.4 -1.6 antitermination protein N compare
NOLOHH_07575 rfaF -2.4 -3.2 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_23510 fur -2.4 -4.1 ferric iron uptake transcriptional regulator compare
NOLOHH_17675 ydiT -2.4 -2.1 Ferredoxin-like protein YdiT compare
NOLOHH_19095 narW -2.3 -2.3 nitrate reductase molybdenum cofactor assembly chaperone compare
NOLOHH_06920 mnmG -2.3 -7.5 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_14490 nuoH -2.3 -6.1 NADH-quinone oxidoreductase subunit NuoH compare
NOLOHH_14495 nuoI -2.3 -3.3 NADH-quinone oxidoreductase subunit NuoI compare
NOLOHH_06665 wzyE -2.2 -7.6 ECA oligosaccharide polymerase compare
NOLOHH_11365 rpiA -2.2 -3.7 ribose-5-phosphate isomerase RpiA compare
NOLOHH_07535 rfaG -2.2 -5.9 Lipopolysaccharide core biosynthesis protein RfaG compare
NOLOHH_16015 pduF -2.2 -1.4 propanediol diffusion facilitator PduF compare
NOLOHH_01255 lon_P403L -2.1 -8.3 Lon protease compare
NOLOHH_13300 iscA -2.1 -2.1 iron-sulfur cluster assembly protein IscA compare
NOLOHH_02845 aceE -2.1 -3.6 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_13310 hscA -2.0 -4.0 Fe-S protein assembly chaperone HscA compare
NOLOHH_14475 nuoE -2.0 -2.8 NADH-quinone oxidoreductase subunit NuoE compare
NOLOHH_14340 ubiX -1.9 -2.5 flavin prenyltransferase UbiX compare
NOLOHH_04525 miaA -1.9 -1.7 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
NOLOHH_19520 -1.9 -1.6 YnbE family lipoprotein compare
NOLOHH_04655 epmB -1.8 -1.8 EF-P beta-lysylation protein EpmB compare
NOLOHH_18050 rsxE -1.8 -2.2 electron transport complex subunit RsxE compare
NOLOHH_01270 clpP -1.8 -3.8 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_06550 xerC -1.8 -1.8 tyrosine recombinase XerC compare
NOLOHH_14485 nuoG -1.8 -5.6 NADH-quinone oxidoreductase subunit NuoG compare
NOLOHH_06300 dsbA -1.8 -4.3 thiol:disulfide interchange protein DsbA compare
NOLOHH_18060 rsxD -1.8 -4.4 electron transport complex subunit RsxD compare
NOLOHH_11770 yqeL -1.7 -2.0 Uncharacterized protein YqeL compare
NOLOHH_07640 cysE -1.7 -1.4 serine O-acetyltransferase compare
NOLOHH_19535 hslJ -1.7 -2.5 heat shock protein HslJ compare
NOLOHH_03190 apaH -1.7 -6.7 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_15215 yehW -1.6 -2.9 glycine betaine ABC transporter permease YehW compare
NOLOHH_05250 -1.6 -1.6 Putative type III effector protein compare
NOLOHH_23305 sucC -1.6 -6.9 ADP-forming succinate--CoA ligase subunit beta compare
NOLOHH_11230 tkt -1.5 -2.2 transketolase compare
NOLOHH_19260 hicB -1.5 -1.6 type II toxin-antitoxin system antitoxin HicB compare
NOLOHH_14480 nuoF -1.5 -7.0 NADH-quinone oxidoreductase subunit NuoF compare
NOLOHH_18065 rsxC -1.5 -6.5 electron transport complex subunit RsxC compare
NOLOHH_02690 dksA -1.5 -5.4 RNA polymerase-binding protein DksA compare
NOLOHH_17055 -1.5 -2.0 Cytoplasmic protein compare
NOLOHH_13865 crr -1.5 -1.4 PTS glucose transporter subunit IIA compare
NOLOHH_11480 sdhE -1.5 -1.1 FAD assembly factor SdhE compare
NOLOHH_06385 fre -1.5 -7.5 NAD(P)H-flavin reductase compare
NOLOHH_05490 hupA -1.5 -1.9 DNA-binding protein HU-alpha compare
NOLOHH_14465 nuoB -1.5 -5.7 NADH-quinone oxidoreductase subunit NuoB compare
NOLOHH_08900 aroK -1.5 -1.7 shikimate kinase AroK compare
NOLOHH_14510 nuoL -1.5 -4.9 NADH-quinone oxidoreductase subunit L compare
NOLOHH_09835 obgE -1.4 -1.4 GTPase ObgE compare
NOLOHH_13075 lepA -1.4 -4.4 translation elongation factor 4 compare
NOLOHH_18220 ydgD -1.4 -1.2 Uncharacterized serine protease YdgD compare
NOLOHH_13435 -1.4 -1.0 hypothetical protein compare
NOLOHH_14515 nuoM -1.4 -4.5 NADH-quinone oxidoreductase subunit M compare
NOLOHH_14520 nuoN -1.4 -4.0 NADH-quinone oxidoreductase subunit NuoN compare
NOLOHH_10555 glgS -1.4 -1.5 cell surface composition regulator GlgS compare
NOLOHH_23325 sdhA -1.4 -6.4 succinate dehydrogenase flavoprotein subunit compare
NOLOHH_11425 ubiI -1.4 -1.8 FAD-dependent 2-octaprenylphenol hydroxylase compare
NOLOHH_17160 yeaR -1.3 -0.8 Uncharacterized protein YeaR compare
NOLOHH_20635 dauA -1.3 -2.2 C4-dicarboxylic acid transporter DauA compare
NOLOHH_24515 -1.3 -0.8 prepilin peptidase compare
NOLOHH_16880 -1.3 -1.9 hypothetical protein compare
NOLOHH_13320 iscX -1.3 -1.4 Fe-S cluster assembly protein IscX compare
NOLOHH_13070 rseC -1.3 -4.3 SoxR-reducing system protein RseC compare
NOLOHH_18155 fumC -1.3 -1.8 class II fumarate hydratase compare
NOLOHH_21265 dinI -1.3 -1.5 DNA damage-inducible protein I compare
NOLOHH_18115 hdhA -1.3 -1.6 7-alpha-hydroxysteroid dehydrogenase compare
NOLOHH_17270 yeaC -1.2 -2.6 Uncharacterized protein YeaC compare
NOLOHH_14780 apbE -1.2 -2.1 FAD:protein FMN transferase ApbE compare
NOLOHH_03330 -1.2 -0.9 T3SS effector EspX compare
NOLOHH_06530 corA -1.2 -3.4 magnesium/cobalt transporter CorA compare
NOLOHH_08375 pitA -1.2 -4.5 inorganic phosphate transporter PitA compare
NOLOHH_07540 rfaP -1.2 -4.6 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_04205 fbp -1.2 -6.9 class 1 fructose-bisphosphatase compare
NOLOHH_24715 traS -1.2 -1.9 conjugal transfer entry exclusion protein TraS compare
NOLOHH_17835 -1.2 -1.4 Ferredoxin compare
NOLOHH_00385 -1.2 -2.5 hypothetical protein compare
NOLOHH_06250 hemN -1.2 -7.1 oxygen-independent coproporphyrinogen III oxidase compare
NOLOHH_17170 insQ -1.2 -0.9 Putative RNA-guided DNA endonuclease InsQ compare
NOLOHH_23320 sdhB -1.1 -4.8 succinate dehydrogenase iron-sulfur subunit SdhB compare
NOLOHH_14470 nuoC -1.1 -4.3 NADH-quinone oxidoreductase subunit C/D compare
NOLOHH_12805 rnfH -1.1 -2.2 RnfH family protein compare
NOLOHH_22965 -1.1 -2.5 XRE family transcriptional regulator compare
NOLOHH_18315 rspB -1.1 -1.3 Zn-dependent oxidoreductase compare
NOLOHH_23300 sucD -1.1 -3.6 succinate--CoA ligase subunit alpha compare
NOLOHH_20455 hns -1.1 -3.2 DNA-binding transcriptional regulator H-NS compare
NOLOHH_14300 usg -1.1 -3.0 aspartate-semialdehyde dehydrogenase compare
NOLOHH_23335 sdhC -1.1 -2.6 succinate dehydrogenase cytochrome b556 subunit compare
NOLOHH_05695 sthA -1.1 -5.0 Si-specific NAD(P)(+) transhydrogenase compare
NOLOHH_21200 flgC -1.1 -0.8 flagellar basal body rod protein FlgC compare
NOLOHH_08775 -1.1 -4.2 NfuA family Fe-S biogenesis protein compare
NOLOHH_14460 nuoA -1.1 -1.8 NADH-quinone oxidoreductase subunit NuoA compare
NOLOHH_03430 thrC -1.1 -4.8 threonine synthase compare
NOLOHH_01380 pgpA -1.1 -1.3 phosphatidylglycerophosphatase A compare
NOLOHH_15485 yegS -1.0 -2.9 lipid kinase YegS compare
NOLOHH_16030 -1.0 -1.6 cobalamin biosynthesis protein compare
NOLOHH_13390 bamB -1.0 -4.3 outer membrane protein assembly factor BamB compare
NOLOHH_24820 -1.0 -1.0 Conjugal transfer protein TrbD compare
NOLOHH_23310 odhB -1.0 -0.9 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
NOLOHH_20905 hflD -1.0 -1.2 high frequency lysogenization protein HflD compare
NOLOHH_20715 -1.0 -1.6 hypothetical protein compare
NOLOHH_07015 pstC -1.0 -2.8 phosphate ABC transporter permease PstC compare
NOLOHH_17400 ydjZ -1.0 -1.5 TVP38/TMEM64 family inner membrane protein YdjZ compare
NOLOHH_19385 ydcF -1.0 -0.7 Protein YdcF compare
NOLOHH_21095 fabF -1.0 -2.0 beta-ketoacyl-ACP synthase II compare
NOLOHH_21130 yceD -1.0 -2.2 23S rRNA accumulation protein YceD compare
NOLOHH_00785 fimC -1.0 -0.7 type 1 fimbria chaperone FimC compare
NOLOHH_06220 typA -1.0 -6.8 ribosome-dependent GTPase TypA compare
NOLOHH_11790 yqeH -0.9 -2.4 Uncharacterized protein YqeH compare
NOLOHH_23330 sdhD -0.9 -4.1 succinate dehydrogenase membrane anchor subunit compare
NOLOHH_11415 pepP -0.9 -3.2 Xaa-Pro aminopeptidase compare
NOLOHH_09595 mdh -0.9 -5.6 malate dehydrogenase compare
NOLOHH_17530 ybcI -0.9 -1.3 metal-dependent hydrolase compare
NOLOHH_13410 guaB -0.9 -4.7 IMP dehydrogenase compare
NOLOHH_23250 tolR -0.9 -1.9 colicin uptake protein TolR compare
NOLOHH_03300 fkpB -0.9 -1.0 FKBP-type peptidyl-prolyl cis-trans isomerase compare
NOLOHH_18650 ydeJ -0.9 -1.7 2-oxo-tetronate isomerase compare
NOLOHH_15515 yegP -0.9 -1.7 UPF0339 protein YegP compare
NOLOHH_14910 yejM -0.9 -1.5 LPS biosynthesis-modulating metalloenzyme YejM compare
NOLOHH_13640 arsC -0.9 -1.8 ArsC family reductase compare
NOLOHH_14305 truA -0.9 -2.4 tRNA pseudouridine(38-40) synthase TruA compare
NOLOHH_17555 pfkB -0.9 -0.8 6-phosphofructokinase II compare
NOLOHH_17390 ynjB -0.9 -2.5 ABC transporter substrate-binding protein compare
NOLOHH_15425 yegW -0.9 -1.5 Uncharacterized HTH-type transcriptional regulator YegW compare
NOLOHH_19510 feaR -0.9 -1.9 transcriptional regulator FeaR compare
NOLOHH_19195 mcbR -0.9 -0.7 colanic acid/biofilm transcriptional regulator McbR compare
NOLOHH_04075 yjgN -0.9 -2.0 Inner membrane protein YjgN compare
NOLOHH_23875 uspG -0.9 -2.4 universal stress protein UspG compare
NOLOHH_03525 serB -0.9 -5.5 phosphoserine phosphatase compare
NOLOHH_24390 -0.9 -1.7 nuclease PIN compare
NOLOHH_03025 mraZ -0.9 -2.0 division/cell wall cluster transcriptional repressor MraZ compare
NOLOHH_11490 fldB -0.9 -4.1 flavodoxin FldB compare
NOLOHH_23160 galM -0.9 -2.2 galactose-1-epimerase compare
NOLOHH_17545 yniA -0.9 -1.4 putative ketoamine kinase YniA compare
NOLOHH_11775 yqeJ -0.9 -0.8 Uncharacterized protein YqeJ compare
NOLOHH_20030 pgmB -0.9 -1.3 beta-phosphoglucomutase compare
NOLOHH_00180 -0.9 -3.0 Plasmid stability protein stbA compare
NOLOHH_20065 ycjN -0.9 -2.3 Putative ABC transporter periplasmic-binding protein YcjN compare
NOLOHH_17230 cdgI -0.9 -1.8 putative diguanylate cyclase CdgI compare
NOLOHH_16175 zinT -0.8 -0.9 metal-binding protein ZinT compare
NOLOHH_16505 ftnB -0.8 -1.0 non-heme ferritin-like protein compare
NOLOHH_20745 dsbB -0.8 -2.2 disulfide bond formation protein DsbB compare
NOLOHH_03030 cra -0.8 -3.0 catabolite repressor/activator compare
NOLOHH_23345 gltA -0.8 -3.9 citrate synthase compare
NOLOHH_22430 rimO -0.8 -1.8 30S ribosomal protein S12 methylthiotransferase RimO compare
NOLOHH_16700 -0.8 -1.1 putative transcriptional regulatory protein YebC compare
NOLOHH_15240 yehS -0.8 -2.2 Uncharacterized protein YehS compare
NOLOHH_00405 hipB -0.8 -0.6 XRE family transcriptional regulator compare
NOLOHH_14160 Arg_trna -0.8 -2.2 tRNA-Arg(cct) compare
NOLOHH_19995 tpx -0.8 -1.0 thiol peroxidase compare
NOLOHH_04755 ghoT -0.8 -1.8 type V toxin-antitoxin system toxin GhoT compare
NOLOHH_24290 ssb -0.8 -1.7 single-stranded DNA-binding protein compare
NOLOHH_02825 acnB -0.8 -1.6 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
NOLOHH_22195 cspD -0.8 -1.7 cold shock-like protein CspD compare
NOLOHH_06590 cyaA -0.8 -4.2 class I adenylate cyclase compare
NOLOHH_21480 efeB -0.8 -1.3 iron uptake transporter deferrochelatase/peroxidase subunit compare
NOLOHH_20735 fadR -0.8 -1.1 fatty acid metabolism transcriptional regulator FadR compare
NOLOHH_13035 srmB -0.8 -3.6 ATP-dependent RNA helicase SrmB compare
NOLOHH_19330 ydcJ -0.8 -1.2 Uncharacterized protein YdcJ compare
NOLOHH_15585 pphC -0.8 -1.5 Serine/threonine-protein phosphatase 3 compare
NOLOHH_22795 -0.8 -0.7 toxin-antitoxin system HicB family antitoxin compare
NOLOHH_18915 yddB -0.8 -0.9 Uncharacterized protein YddB compare
NOLOHH_19505 feaB -0.8 -2.4 phenylacetaldehyde dehydrogenase compare
NOLOHH_04005 Leu_trna -0.8 -0.8 tRNA-Leu(caa) compare
NOLOHH_17175 yeaQ -0.8 -1.4 UPF0410 protein YeaQ compare
NOLOHH_06730 trxA -0.8 -1.7 thioredoxin TrxA compare
NOLOHH_13585 -0.8 -0.9 hypothetical protein compare
NOLOHH_21015 ycfJ -0.8 -1.1 Uncharacterized protein YcfJ compare
NOLOHH_17665 ppsA -0.7 -1.3 phosphoenolpyruvate synthase compare
NOLOHH_07230 yidQ -0.7 -2.5 Uncharacterized protein YidQ compare
NOLOHH_16335 fliH -0.7 -0.9 flagellar assembly protein FliH compare
NOLOHH_17625 btuE -0.7 -1.2 bifunctional thioredoxin/glutathione peroxidase compare
NOLOHH_20500 narI -0.7 -1.5 respiratory nitrate reductase subunit gamma compare
NOLOHH_04490 nsrR -0.7 -4.0 nitric oxide-sensing transcriptional repressor NsrR compare
NOLOHH_13450 ppk1 -0.7 -3.0 polyphosphate kinase 1 compare
NOLOHH_13590 purC -0.7 -2.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
NOLOHH_09355 aroE -0.7 -2.7 shikimate dehydrogenase compare
NOLOHH_05230 plsB -0.7 -1.0 glycerol-3-phosphate 1-O-acyltransferase PlsB compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms