Experiment set3S314 for Phocaeicola dorei CL03T12C01

Compare to:

Mucin from porcine stomach,Type II; autoclaved 2.5 mg/ml carbon source

200 most important genes:

  gene name fitness t score description  
ABI39_RS04795 -3.9 -2.6 M28 family peptidase compare
ABI39_RS12415 -3.9 -3.9 biotin/lipoyl-binding protein compare
ABI39_RS00205 -3.7 -3.6 phosphoglucosamine mutase compare
ABI39_RS18745 -3.5 -4.8 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
ABI39_RS12425 -3.4 -9.3 acyl-CoA carboxylase subunit beta compare
ABI39_RS20085 -3.3 -6.8 electron transport complex subunit E compare
ABI39_RS13180 -3.1 -3.0 FAD:protein FMN transferase compare
ABI39_RS17950 -3.0 -3.1 Crp/Fnr family transcriptional regulator compare
ABI39_RS12420 -3.0 -6.1 OadG family protein compare
ABI39_RS01650 -3.0 -8.6 methylmalonyl-CoA mutase small subunit compare
ABI39_RS16870 -2.9 -3.9 Na(+)-translocating NADH-quinone reductase subunit A compare
ABI39_RS19385 -2.9 -3.8 hypothetical protein compare
ABI39_RS13845 -2.8 -1.5 histone H1 compare
ABI39_RS20080 -2.8 -4.9 electron transport complex subunit RsxA compare
ABI39_RS15410 -2.8 -6.8 DUF4296 domain-containing protein compare
ABI39_RS12770 -2.8 -4.5 hypothetical protein compare
ABI39_RS20965 -2.7 -2.9 SPOR domain-containing protein compare
ABI39_RS16885 -2.7 -2.7 NADH:ubiquinone reductase (Na(+)-transporting) subunit D compare
ABI39_RS20070 -2.7 -9.5 UDP-glucose 4-epimerase GalE compare
ABI39_RS02755 -2.6 -1.8 glycosyltransferase compare
ABI39_RS09685 -2.4 -2.2 hypothetical protein compare
ABI39_RS17140 -2.4 -2.8 AAA family ATPase compare
ABI39_RS06380 -2.4 -8.5 GH3 auxin-responsive promoter family protein compare
ABI39_RS20100 -2.4 -6.0 electron transport complex subunit RsxC compare
ABI39_RS09845 -2.4 -2.8 (d)CMP kinase compare
ABI39_RS01655 -2.4 -9.1 methylmalonyl-CoA mutase compare
ABI39_RS20090 -2.3 -6.0 RnfABCDGE type electron transport complex subunit G compare
ABI39_RS16875 -2.3 -3.3 NADH:ubiquinone reductase (Na(+)-transporting) subunit B compare
ABI39_RS00410 -2.3 -4.3 response regulator compare
ABI39_RS04860 -2.2 -2.0 HigA family addiction module antidote protein compare
ABI39_RS02125 -2.1 -1.7 hypothetical protein compare
ABI39_RS20095 -2.1 -7.5 RnfABCDGE type electron transport complex subunit D compare
ABI39_RS16880 -2.0 -3.3 Na(+)-translocating NADH-quinone reductase subunit C compare
ABI39_RS20395 -1.9 -3.1 DedA family protein compare
ABI39_RS17640 -1.8 -4.4 YebC/PmpR family DNA-binding transcriptional regulator compare
ABI39_RS22955 -1.8 -3.5 hypothetical protein compare
ABI39_RS00090 -1.7 -4.1 HAMP domain-containing histidine kinase compare
ABI39_RS18910 -1.7 -2.2 preprotein translocase subunit YajC compare
ABI39_RS17175 -1.7 -4.4 tetratricopeptide repeat protein compare
ABI39_RS23105 -1.7 -1.4 hypothetical protein compare
ABI39_RS09830 -1.7 -6.8 methylmalonyl Co-A mutase-associated GTPase MeaB compare
ABI39_RS09850 -1.7 -3.9 energy transducer TonB compare
ABI39_RS19985 -1.6 -1.3 pyridoxal phosphate-dependent aminotransferase compare
ABI39_RS16700 -1.6 -5.4 agmatine deiminase family protein compare
ABI39_RS04700 -1.6 -4.4 type I DNA topoisomerase compare
ABI39_RS19775 -1.6 -1.8 tRNA-Met compare
ABI39_RS20105 -1.5 -4.5 Fe-S cluster domain-containing protein compare
ABI39_RS04970 -1.5 -3.9 Holliday junction branch migration DNA helicase RuvB compare
ABI39_RS17150 -1.5 -3.4 hypothetical protein compare
ABI39_RS04455 -1.5 -11.1 TonB-dependent receptor compare
ABI39_RS16040 -1.4 -1.0 hypothetical protein compare
ABI39_RS04425 -1.4 -8.6 hypothetical protein compare
ABI39_RS12430 -1.4 -1.0 methylmalonyl-CoA epimerase compare
ABI39_RS02060 -1.4 -4.6 translocation/assembly module TamB domain-containing protein compare
ABI39_RS09515 -1.4 -3.2 nucleoside deaminase compare
ABI39_RS12450 -1.4 -1.6 Rossmann-like and DUF2520 domain-containing protein compare
ABI39_RS16305 -1.4 -1.0 DUF4141 domain-containing protein compare
ABI39_RS15710 -1.3 -1.6 hypothetical protein compare
ABI39_RS20405 -1.3 -2.6 GDP-L-fucose synthase compare
ABI39_RS15265 -1.3 -2.2 crossover junction endodeoxyribonuclease RuvC compare
ABI39_RS04280 -1.3 -3.8 DUF4292 domain-containing protein compare
ABI39_RS04460 -1.3 -7.4 RagB/SusD family nutrient uptake outer membrane protein compare
ABI39_RS18385 -1.2 -1.4 helix-turn-helix domain-containing protein compare
ABI39_RS17160 -1.2 -1.9 VWA domain-containing protein compare
ABI39_RS08035 -1.2 -2.3 adenylosuccinate lyase compare
ABI39_RS02055 -1.2 -3.5 BamA/TamA family outer membrane protein compare
ABI39_RS10110 -1.2 -6.9 S9 family peptidase compare
ABI39_RS05450 -1.2 -2.9 redox-regulated ATPase YchF compare
ABI39_RS13835 -1.2 -2.1 DUF3037 domain-containing protein compare
ABI39_RS13010 -1.2 -3.6 hypothetical protein compare
ABI39_RS04950 -1.2 -2.2 DEAD/DEAH box helicase compare
ABI39_RS03830 -1.2 -1.4 ribosome-associated translation inhibitor RaiA compare
ABI39_RS20060 -1.1 -6.0 YitT family protein compare
ABI39_RS15010 -1.1 -1.4 F0F1 ATP synthase subunit gamma compare
ABI39_RS04470 -1.1 -5.0 DUF5115 domain-containing protein compare
ABI39_RS12805 -1.1 -2.5 hypothetical protein compare
ABI39_RS02290 -1.1 -1.8 hypothetical protein compare
ABI39_RS09855 -1.1 -2.2 polyprenyl synthetase family protein compare
ABI39_RS10455 -1.1 -5.6 iron ABC transporter permease compare
ABI39_RS04465 -1.1 -5.6 SusF/SusE family outer membrane protein compare
ABI39_RS13185 -1.0 -1.4 manganese efflux pump compare
ABI39_RS07005 -1.0 -3.8 type II 3-dehydroquinate dehydratase compare
ABI39_RS04475 -1.0 -7.1 alpha-amylase compare
ABI39_RS17245 -1.0 -2.0 tRNA (guanosine(37)-N1)-methyltransferase TrmD compare
ABI39_RS19950 -1.0 -2.5 diaminopimelate decarboxylase compare
ABI39_RS16895 -1.0 -2.1 NADH:ubiquinone reductase (Na(+)-transporting) subunit F compare
ABI39_RS11140 -1.0 -1.0 undecaprenyl-phosphate glucose phosphotransferase compare
ABI39_RS07500 -1.0 -2.2 hypothetical protein compare
ABI39_RS12645 -1.0 -6.9 chorismate synthase compare
ABI39_RS18660 -1.0 -1.1 Hsp20/alpha crystallin family protein compare
ABI39_RS11930 -1.0 -2.6 recombinase RecA compare
ABI39_RS17195 -1.0 -4.6 hypothetical protein compare
ABI39_RS16130 -1.0 -1.7 DUF3945 domain-containing protein compare
ABI39_RS18330 -1.0 -5.7 PD40 domain-containing protein compare
ABI39_RS06920 -0.9 -3.3 glycosyltransferase compare
ABI39_RS07010 -0.9 -1.2 pyruvate kinase compare
ABI39_RS17320 -0.9 -2.1 YhcH/YjgK/YiaL family protein compare
ABI39_RS00515 -0.9 -2.0 hypothetical protein compare
ABI39_RS14345 -0.9 -6.0 dicarboxylate/amino acid:cation symporter compare
ABI39_RS01360 -0.9 -3.8 hypothetical protein compare
ABI39_RS11690 -0.9 -4.4 cytidine deaminase compare
ABI39_RS16235 -0.9 -2.3 hypothetical protein compare
ABI39_RS15000 -0.9 -1.3 F0F1 ATP synthase subunit delta compare
ABI39_RS06010 -0.9 -4.2 polysaccharide deacetylase family protein compare
ABI39_RS06050 -0.9 -2.2 hypothetical protein compare
ABI39_RS10470 -0.9 -5.5 hypothetical protein compare
ABI39_RS21350 -0.9 -1.7 aspartate--ammonia ligase compare
ABI39_RS13410 -0.9 -1.5 HU family DNA-binding protein compare
ABI39_RS08305 -0.8 -4.1 DUF4831 family protein compare
ABI39_RS10460 -0.8 -2.6 ABC transporter substrate-binding protein compare
ABI39_RS16695 -0.8 -3.9 carbon-nitrogen hydrolase compare
ABI39_RS00240 -0.8 -2.6 NigD-like N-terminal domain-containing protein compare
ABI39_RS14560 -0.8 -1.6 aspartate 1-decarboxylase compare
ABI39_RS07090 -0.8 -5.5 hypothetical protein compare
ABI39_RS04145 -0.8 -1.2 transcription elongation factor GreA compare
ABI39_RS09245 -0.8 -3.9 cardiolipin synthase compare
ABI39_RS15865 -0.8 -2.8 hypothetical protein compare
ABI39_RS17170 -0.8 -1.4 protein BatD compare
ABI39_RS02470 -0.8 -2.4 ATP-dependent DNA helicase RecG compare
ABI39_RS06220 -0.8 -4.8 glycosyltransferase family 2 protein compare
ABI39_RS14265 -0.8 -2.9 ATP-dependent dethiobiotin synthetase BioD compare
ABI39_RS05765 -0.8 -1.1 DUF4294 domain-containing protein compare
ABI39_RS15970 -0.8 -1.8 hypothetical protein compare
ABI39_RS20440 -0.8 -4.5 SLBB domain-containing protein compare
ABI39_RS04695 -0.8 -4.1 shikimate kinase compare
ABI39_RS12780 -0.8 -2.2 type III pantothenate kinase compare
ABI39_RS19625 -0.8 -1.4 hypothetical protein compare
ABI39_RS22960 -0.8 -1.0 hypothetical protein compare
ABI39_RS05280 -0.8 -4.8 S41 family peptidase compare
ABI39_RS03850 -0.7 -4.3 gamma carbonic anhydrase family protein compare
ABI39_RS19435 -0.7 -2.5 hypothetical protein compare
ABI39_RS17310 -0.7 -4.2 hypothetical protein compare
ABI39_RS05655 -0.7 -2.0 hypothetical protein compare
ABI39_RS08510 -0.7 -1.9 NADH-quinone oxidoreductase subunit NuoK compare
ABI39_RS15400 -0.7 -4.9 TraR/DksA C4-type zinc finger protein compare
ABI39_RS09230 -0.7 -1.0 hypothetical protein compare
ABI39_RS16640 -0.7 -2.6 DUF4251 domain-containing protein compare
ABI39_RS10475 -0.7 -5.1 TonB-dependent receptor compare
ABI39_RS10450 -0.7 -1.9 ABC transporter ATP-binding protein compare
ABI39_RS16115 -0.7 -2.7 DUF1896 domain-containing protein compare
ABI39_RS18920 -0.7 -2.1 PUR family DNA/RNA-binding protein compare
ABI39_RS21190 -0.7 -1.7 dihydrodipicolinate synthase family protein compare
ABI39_RS02845 -0.7 -3.8 RluA family pseudouridine synthase compare
ABI39_RS20285 -0.7 -2.4 glycosyltransferase compare
ABI39_RS06995 -0.7 -3.1 tetratricopeptide repeat protein compare
ABI39_RS14715 -0.7 -2.7 RidA family protein compare
ABI39_RS14250 -0.7 -2.5 8-amino-7-oxononanoate synthase compare
ABI39_RS10380 -0.7 -1.6 helix-turn-helix transcriptional regulator compare
ABI39_RS20140 -0.7 -2.3 copper homeostasis protein CutC compare
ABI39_RS18165 -0.7 -1.1 DUF5024 domain-containing protein compare
ABI39_RS20355 -0.7 -4.4 carboxypeptidase-like regulatory domain-containing protein compare
ABI39_RS20075 -0.7 -2.8 hypothetical protein compare
ABI39_RS19125 -0.7 -2.0 hypothetical protein compare
ABI39_RS10920 -0.7 -3.4 galactose mutarotase compare
ABI39_RS15775 -0.7 -0.9 hypothetical protein compare
ABI39_RS05635 -0.7 -0.6 class I SAM-dependent methyltransferase compare
ABI39_RS15890 -0.6 -2.5 phosphoadenosine phosphosulfate reductase family protein compare
ABI39_RS15760 -0.6 -0.7 hypothetical protein compare
ABI39_RS04930 -0.6 -2.4 helix-turn-helix transcriptional regulator compare
ABI39_RS04730 -0.6 -0.8 Lrp/AsnC ligand binding domain-containing protein compare
ABI39_RS20390 -0.6 -3.3 hypothetical protein compare
ABI39_RS14090 -0.6 -1.4 hypothetical protein compare
ABI39_RS01730 -0.6 -3.0 electron transfer flavoprotein subunit alpha/FixB family protein compare
ABI39_RS09680 -0.6 -3.3 DUF3822 family protein compare
ABI39_RS15320 -0.6 -4.5 PorT family protein compare
ABI39_RS09510 -0.6 -1.2 hypothetical protein compare
ABI39_RS05650 -0.6 -3.7 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
ABI39_RS22360 -0.6 -1.0 potassium-transporting ATPase subunit F compare
ABI39_RS10105 -0.6 -1.7 lipoyl synthase compare
ABI39_RS08195 -0.6 -1.8 hypothetical protein compare
ABI39_RS11730 -0.6 -2.7 glucosaminidase domain-containing protein compare
ABI39_RS07000 -0.6 -1.1 site-specific tyrosine recombinase XerD compare
ABI39_RS16915 -0.6 -4.1 DUF1015 domain-containing protein compare
ABI39_RS09935 -0.6 -2.7 DNA topoisomerase 3 compare
ABI39_RS20435 -0.6 -2.4 chain-length determining protein compare
ABI39_RS12665 -0.6 -3.1 shikimate dehydrogenase compare
ABI39_RS07070 -0.6 -2.5 peptide chain release factor N(5)-glutamine methyltransferase compare
ABI39_RS19745 -0.6 -1.5 hypothetical protein compare
ABI39_RS15840 -0.6 -2.1 hypothetical protein compare
ABI39_RS17770 -0.6 -2.1 flavodoxin family protein compare
ABI39_RS07445 -0.6 -2.3 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABI39_RS12755 -0.6 -1.4 SurA N-terminal domain-containing protein compare
ABI39_RS18350 -0.6 -2.3 GAF domain-containing protein compare
ABI39_RS19580 -0.6 -2.0 hypothetical protein compare
ABI39_RS16980 -0.6 -1.0 helix-turn-helix transcriptional regulator compare
ABI39_RS19105 -0.6 -1.4 aldo/keto reductase compare
ABI39_RS09825 -0.6 -1.5 DUF1573 domain-containing protein compare
ABI39_RS14320 -0.6 -3.1 anaerobic C4-dicarboxylate transporter compare
ABI39_RS13170 -0.6 -4.4 Crp/Fnr family transcriptional regulator compare
ABI39_RS21195 -0.6 -2.6 AGE family epimerase/isomerase compare
ABI39_RS06670 -0.6 -3.3 2-oxoacid:acceptor oxidoreductase subunit alpha compare
ABI39_RS15735 -0.6 -0.9 hypothetical protein compare
ABI39_RS10325 -0.6 -2.7 ABC-F family ATP-binding cassette domain-containing protein compare
ABI39_RS08555 -0.6 -2.2 Trk system potassium transporter TrkA compare
ABI39_RS06925 -0.6 -3.3 glycosyltransferase compare
ABI39_RS04240 -0.6 -2.4 glycine cleavage system protein GcvH compare
ABI39_RS11215 -0.6 -2.3 hypothetical protein compare
ABI39_RS07655 -0.6 -0.5 peptidase M15 compare
ABI39_RS13265 -0.6 -0.9 hypothetical protein compare
ABI39_RS12500 -0.6 -1.3 class I SAM-dependent methyltransferase compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Mucin from porcine stomach,Type II; autoclaved in Phocaeicola dorei CL03T12C01

For carbon source Mucin from porcine stomach,Type II; autoclaved across organisms