Experiment set3S273 for Fusobacterium nucleatum SB010

Compare to:

Time0_glycerolstock

200 most detrimental genes:

  gene name fitness t score description  
HUW76_02845 +4.0 25.0 serine/threonine protein kinase compare
HUW76_02850 +3.8 22.9 VacJ family lipoprotein compare
HUW76_02970 +3.8 24.4 SH3 domain-containing protein compare
HUW76_05835 +3.7 9.6 hypothetical protein compare
HUW76_01315 +3.5 6.9 dTDP-4-dehydrorhamnose reductase compare
HUW76_06970 +3.5 26.6 SpoIID/LytB domain-containing protein compare
HUW76_01840 +3.5 19.7 hypothetical protein compare
HUW76_10115 +3.5 18.0 ATP-dependent zinc metalloprotease FtsH compare
HUW76_02665 +3.4 14.2 anaerobic ribonucleoside-triphosphate reductase compare
HUW76_05900 +3.3 17.4 hypothetical protein compare
HUW76_07895 +3.1 20.7 aminopeptidase P family protein compare
HUW76_05600 +3.0 12.9 META domain-containing protein compare
HUW76_10460 +2.9 7.5 FtsW/RodA/SpoVE family cell cycle protein compare
HUW76_05050 +2.9 5.7 cell division protein SepF compare
HUW76_06690 +2.8 12.1 PP2C family protein-serine/threonine phosphatase compare
HUW76_00275 +2.8 22.2 serine hydrolase compare
HUW76_06700 +2.8 8.6 RNase adapter RapZ compare
HUW76_04190 +2.7 7.5 LytR C-terminal domain-containing protein compare
HUW76_04225 +2.6 17.2 TlyA family RNA methyltransferase compare
HUW76_05825 +2.6 3.9 transpeptidase family protein compare
HUW76_07605 +2.6 19.5 lactate dehydrogenase compare
HUW76_06530 +2.5 14.6 chromosome segregation protein SMC compare
HUW76_10380 +2.5 2.8 transcription termination/antitermination factor NusG compare
HUW76_08870 +2.5 5.3 cell division protein FtsZ compare
HUW76_03430 +2.3 3.4 hypothetical protein compare
HUW76_00325 +2.2 13.7 HAMP domain-containing histidine kinase compare
HUW76_09030 +2.2 5.9 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
HUW76_05605 +2.2 12.4 PTS glucose transporter subunit IIA compare
HUW76_03635 +2.2 11.7 sigma-54-dependent Fis family transcriptional regulator compare
HUW76_01030 +2.2 7.6 DUF448 domain-containing protein compare
HUW76_04050 +2.1 8.9 glycosyltransferase compare
HUW76_00735 +2.1 6.4 peptidylprolyl isomerase compare
HUW76_01390 +2.1 8.2 O-antigen ligase family protein compare
HUW76_01050 +2.1 12.1 trigger factor compare
HUW76_03425 +2.0 3.3 hypothetical protein compare
HUW76_09085 +2.0 10.1 hypothetical protein compare
HUW76_03500 +2.0 14.3 polysaccharide deacetylase family protein compare
HUW76_01020 +2.0 8.5 ribosome maturation factor RimP compare
HUW76_07175 +2.0 7.1 UvrD-helicase domain-containing protein compare
HUW76_04660 +1.9 13.4 lysine transporter LysE compare
HUW76_03285 +1.9 1.8 hypothetical protein compare
HUW76_01265 +1.9 14.8 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
HUW76_04220 +1.9 15.4 HD domain-containing protein compare
HUW76_10170 +1.9 14.3 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
HUW76_01535 +1.9 8.6 transcription antitermination factor NusB compare
HUW76_02340 +1.8 8.8 RNA-binding protein compare
HUW76_07600 +1.8 13.9 Glu/Leu/Phe/Val dehydrogenase compare
HUW76_07650 +1.8 16.3 transcription termination factor Rho compare
HUW76_01190 +1.8 10.9 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
HUW76_09725 +1.8 8.4 RnfABCDGE type electron transport complex subunit G compare
HUW76_04055 +1.8 10.0 lipopolysaccharide biosynthesis protein compare
HUW76_03415 +1.8 3.0 hypothetical protein compare
HUW76_07620 +1.8 8.0 type B 50S ribosomal protein L31 compare
HUW76_04385 +1.7 9.6 DNA polymerase I compare
HUW76_03030 +1.7 4.3 NusG domain II-containing protein compare
HUW76_09730 +1.7 8.8 RnfABCDGE type electron transport complex subunit D compare
HUW76_04410 +1.7 5.4 hypothetical protein compare
HUW76_10330 +1.7 10.4 FAD:protein FMN transferase compare
HUW76_02170 +1.7 12.0 hypothetical protein compare
HUW76_07290 +1.6 6.3 phospho-sugar mutase compare
HUW76_03135 +1.6 7.3 Gx transporter family protein compare
HUW76_01700 +1.6 12.5 glucosaminidase domain-containing protein compare
HUW76_01045 +1.6 6.8 single-stranded-DNA-specific exonuclease RecJ compare
HUW76_08045 +1.5 11.9 GTPase Era compare
HUW76_00830 +1.5 8.6 bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1 compare
HUW76_00765 +1.5 12.4 phosphoenolpyruvate--protein phosphotransferase compare
HUW76_01320 +1.5 7.0 hypothetical protein compare
HUW76_05870 +1.5 8.6 1,4-alpha-glucan branching protein GlgB compare
HUW76_05300 +1.5 6.2 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
HUW76_09830 +1.5 7.1 hypothetical protein compare
HUW76_09735 +1.5 9.5 electron transport complex subunit RsxC compare
HUW76_03405 +1.5 6.4 hypothetical protein compare
HUW76_07225 +1.5 12.0 penicillin-binding protein 1C compare
HUW76_01375 +1.4 10.9 glycosyltransferase family 4 protein compare
HUW76_07210 +1.4 6.4 PepSY domain-containing protein compare
HUW76_07400 +1.4 5.3 preprotein translocase subunit SecG compare
HUW76_03435 +1.4 5.6 baseplate J/gp47 family protein compare
HUW76_10760 +1.4 9.1 KH domain-containing protein compare
HUW76_01340 +1.4 6.2 sugar transferase compare
HUW76_09715 +1.4 8.0 electron transport complex subunit RsxA compare
HUW76_10855 +1.4 4.9 hypothetical protein compare
HUW76_09720 +1.4 9.6 electron transport complex subunit E compare
HUW76_01765 +1.4 8.3 peptidylprolyl isomerase compare
HUW76_01855 +1.4 6.0 CoA transferase subunit B compare
HUW76_02090 +1.4 7.4 sigma-54-dependent Fis family transcriptional regulator compare
HUW76_05910 +1.4 9.2 AMP-binding protein compare
HUW76_04210 +1.4 5.8 ribosome assembly RNA-binding protein YhbY compare
HUW76_03455 +1.3 2.2 DUF4376 domain-containing protein compare
HUW76_03400 +1.3 3.0 hypothetical protein compare
HUW76_01200 +1.3 9.3 ATP-binding protein compare
HUW76_08655 +1.3 2.4 CopG family transcriptional regulator compare
HUW76_00550 +1.3 2.9 hypothetical protein compare
HUW76_01195 +1.3 5.5 hypothetical protein compare
HUW76_09055 +1.3 4.5 ACT domain-containing protein compare
HUW76_04755 +1.2 4.9 electron transfer flavoprotein subunit beta/FixA family protein compare
HUW76_04550 +1.2 7.2 imidazolonepropionase compare
HUW76_04750 +1.2 2.0 acyl-CoA dehydrogenase compare
HUW76_07055 +1.2 5.2 shikimate kinase compare
HUW76_00930 +1.2 1.7 tRNA-Gln compare
HUW76_07655 +1.2 8.9 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
HUW76_01820 +1.2 9.5 lysine 5,6-aminomutase subunit alpha compare
HUW76_08970 +1.2 1.7 type II toxin-antitoxin system Phd/YefM family antitoxin compare
HUW76_03445 +1.2 2.7 hypothetical protein compare
HUW76_03440 +1.2 3.1 hypothetical protein compare
HUW76_05010 +1.1 1.8 3-hydroxybutyryl-CoA dehydrogenase compare
HUW76_01825 +1.1 7.9 cobalamin B12-binding domain-containing protein compare
HUW76_03585 +1.1 8.3 peptide chain release factor N(5)-glutamine methyltransferase compare
HUW76_04170 +1.1 5.1 Holliday junction branch migration DNA helicase RuvB compare
HUW76_03420 +1.1 3.2 hypothetical protein compare
HUW76_01325 +1.1 7.6 polysaccharide biosynthesis protein compare
HUW76_07930 +1.1 4.7 tRNA-Arg compare
HUW76_10395 +1.1 6.4 50S ribosomal protein L33 compare
HUW76_05495 +1.1 3.7 SIR2 family protein compare
HUW76_07435 +1.1 1.5 cold-shock protein compare
HUW76_07705 +1.1 1.6 hypothetical protein compare
HUW76_05230 +1.1 6.0 cobyric acid synthase compare
HUW76_08050 +1.0 2.2 site-specific integrase compare
HUW76_07180 +1.0 2.2 helix-turn-helix transcriptional regulator compare
HUW76_09080 +1.0 6.2 DNA repair protein RecO compare
HUW76_05655 +1.0 2.7 hypothetical protein compare
HUW76_01060 +1.0 6.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
HUW76_05240 +1.0 5.0 cobalamin biosynthesis protein CobD compare
HUW76_04875 +1.0 5.7 hypothetical protein compare
HUW76_05265 +1.0 5.7 precorrin-8X methylmutase compare
HUW76_10120 +1.0 2.2 30S ribosomal protein S15 compare
HUW76_01380 +1.0 7.0 Gfo/Idh/MocA family oxidoreductase compare
HUW76_06790 +1.0 6.9 ribosome biogenesis GTPase YqeH compare
HUW76_03095 +1.0 6.7 ATP synthase F1 subunit gamma compare
HUW76_06480 +1.0 8.6 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
HUW76_05850 +1.0 1.9 UvrD-helicase domain-containing protein compare
HUW76_04390 +1.0 7.2 DNA-binding protein WhiA compare
HUW76_10175 +1.0 5.4 TrkA family potassium uptake protein compare
HUW76_10450 +1.0 2.0 chorismate mutase compare
HUW76_04740 +1.0 5.4 threonine/serine exporter ThrE family protein compare
HUW76_01465 +0.9 6.9 ATP-dependent DNA helicase RecG compare
HUW76_08140 +0.9 6.8 1-phosphofructokinase compare
HUW76_05845 +0.9 4.1 PD-(D/E)XK nuclease family protein compare
HUW76_02965 +0.9 6.1 OmpA family protein compare
HUW76_07795 +0.9 1.1 hypothetical protein compare
HUW76_02780 +0.9 2.3 hypothetical protein compare
HUW76_01800 +0.9 6.5 L-erythro-3,5-diaminohexanoate dehydrogenase compare
HUW76_02305 +0.9 2.5 hypothetical protein compare
HUW76_10780 +0.9 8.2 hypothetical protein compare
HUW76_01815 +0.9 5.8 hypothetical protein compare
HUW76_05045 +0.9 5.7 bifunctional oligoribonuclease/PAP phosphatase NrnA compare
HUW76_09820 +0.9 2.3 hypothetical protein compare
HUW76_01330 +0.9 5.6 LegC family aminotransferase compare
HUW76_10440 +0.9 5.7 type II 3-dehydroquinate dehydratase compare
HUW76_00465 +0.9 2.0 thioredoxin compare
HUW76_05640 +0.9 2.5 stage 0 sporulation family protein compare
HUW76_06215 +0.9 3.8 uroporphyrinogen-III C-methyltransferase compare
HUW76_05325 +0.9 3.3 precorrin-2 C(20)-methyltransferase compare
HUW76_05020 +0.8 6.3 lysophospholipid acyltransferase family protein compare
HUW76_02955 +0.8 4.9 glycerol-3-phosphate responsive antiterminator compare
HUW76_01790 +0.8 3.0 3-aminobutyryl-CoA ammonia-lyase compare
HUW76_10820 +0.8 2.4 hypothetical protein compare
HUW76_05375 +0.8 4.0 cobalt-precorrin 5A hydrolase compare
HUW76_08875 +0.8 3.2 cell division protein FtsA compare
HUW76_05250 +0.8 2.6 threonine-phosphate decarboxylase compare
HUW76_03460 +0.8 4.2 M15 family metallopeptidase compare
HUW76_01335 +0.8 5.5 acetyltransferase compare
HUW76_09045 +0.8 4.5 DUF502 domain-containing protein compare
HUW76_09880 +0.8 2.8 OmpH family outer membrane protein compare
HUW76_08375 +0.8 1.0 addiction module toxin RelE compare
HUW76_07355 +0.8 4.2 recombinase RecA compare
HUW76_03110 +0.8 4.2 F0F1 ATP synthase subunit B compare
HUW76_03105 +0.8 4.0 ATP synthase F1 subunit delta compare
HUW76_04160 +0.8 1.2 hypothetical protein compare
HUW76_07510 +0.8 5.6 2-hydroxyacid dehydrogenase compare
HUW76_05720 +0.8 2.9 DUF452 family protein compare
HUW76_03065 +0.8 3.3 tRNA-Arg compare
HUW76_05755 +0.8 5.0 site-specific integrase compare
HUW76_06655 +0.8 3.9 Holliday junction branch migration protein RuvA compare
HUW76_02560 +0.8 5.3 leucine-rich repeat domain-containing protein compare
HUW76_04760 +0.8 3.9 electron transfer flavoprotein subunit alpha/FixB family protein compare
HUW76_08575 +0.8 5.5 RluA family pseudouridine synthase compare
HUW76_01385 +0.8 4.7 glycosyltransferase compare
HUW76_10815 +0.8 6.3 hypothetical protein compare
HUW76_05385 +0.8 3.2 precorrin-6A reductase compare
HUW76_05335 +0.8 4.2 precorrin-4 C(11)-methyltransferase compare
HUW76_01795 +0.8 4.9 3-keto-5-aminohexanoate cleavage protein compare
HUW76_04955 +0.8 1.1 CvpA family protein compare
HUW76_07240 +0.8 6.0 DUF4253 domain-containing protein compare
HUW76_07275 +0.8 0.8 cell division protein SepF compare
HUW76_06025 +0.8 3.8 Rrf2 family transcriptional regulator compare
HUW76_05840 +0.7 5.4 pyridoxal phosphate-dependent aminotransferase compare
HUW76_01850 +0.7 1.7 CoA transferase subunit A compare
HUW76_06560 +0.7 5.7 ROK family protein compare
HUW76_03465 +0.7 4.8 hypothetical protein compare
HUW76_05630 +0.7 1.2 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
HUW76_05115 +0.7 5.2 biotin synthase BioB compare
HUW76_03890 +0.7 4.5 TetR/AcrR family transcriptional regulator compare
HUW76_03290 +0.7 6.3 DUF3164 family protein compare
HUW76_03295 +0.7 3.2 DUF1018 domain-containing protein compare
HUW76_03450 +0.7 1.6 hypothetical protein compare
HUW76_04735 +0.7 2.4 threonine/serine exporter family protein compare
HUW76_03120 +0.7 4.9 F0F1 ATP synthase subunit A compare
HUW76_10445 +0.7 5.1 shikimate dehydrogenase compare
HUW76_05285 +0.7 3.5 cobalamin biosynthesis protein CbiD compare
HUW76_02615 +0.7 5.7 MFS transporter compare


Specific Phenotypes

None in this experiment

For Fusobacterium nucleatum SB010 in time0_glycerolstock experiments