Experiment set3S272 for Fusobacterium nucleatum SB010

Compare to:

Time0_glycerolstock

200 most important genes:

  gene name fitness t score description  
HUW76_08330 -3.4 -1.6 hypothetical protein compare
HUW76_01160 -1.9 -1.1 IS200/IS605 family element transposase accessory protein TnpB compare
HUW76_02910 -1.4 -2.1 tRNA-Ser compare
HUW76_09090 -1.3 -0.8 rod shape-determining protein MreC compare
HUW76_03330 -0.9 -1.0 helix-turn-helix domain-containing protein compare
HUW76_08280 -0.8 -0.8 winged helix-turn-helix transcriptional regulator compare
HUW76_10260 -0.8 -1.0 hypothetical protein compare
HUW76_08390 -0.8 -2.3 heavy-metal-associated domain-containing protein compare
HUW76_08310 -0.7 -2.8 hypothetical protein compare
HUW76_00520 -0.7 -0.5 ribonucleotide-diphosphate reductase subunit beta compare
HUW76_09580 -0.7 -1.5 Smr/MutS family protein compare
HUW76_07710 -0.7 -2.5 hypothetical protein compare
HUW76_02935 -0.7 -0.9 50S ribosomal protein L13 compare
HUW76_01985 -0.7 -3.4 EutN/CcmL family microcompartment protein compare
HUW76_01990 -0.6 -2.8 flavoprotein compare
HUW76_05660 -0.6 -2.1 hypothetical protein compare
HUW76_07915 -0.6 -1.6 hypothetical protein compare
HUW76_03360 -0.6 -0.8 hypothetical protein compare
HUW76_07750 -0.6 -2.5 coproporphyrinogen III oxidase compare
HUW76_04670 -0.6 -2.9 large-conductance mechanosensitive channel protein MscL compare
HUW76_09955 -0.6 -1.3 PAS domain-containing protein compare
HUW76_01650 -0.6 -1.3 hypothetical protein compare
HUW76_00615 -0.6 -0.8 hypothetical protein compare
HUW76_05455 -0.6 -1.6 NUDIX domain-containing protein compare
HUW76_02860 -0.5 -1.1 DUF2156 domain-containing protein compare
HUW76_02450 -0.5 -2.3 IS200/IS605 family element transposase accessory protein TnpB compare
HUW76_10720 -0.5 -1.9 AAA family ATPase compare
HUW76_05080 -0.5 -3.0 GNAT family N-acetyltransferase compare
HUW76_04545 -0.5 -1.9 NADAR family protein compare
HUW76_07765 -0.5 -1.6 hypothetical protein compare
HUW76_05065 -0.5 -0.9 hypothetical protein compare
HUW76_10515 -0.5 -2.4 GlsB/YeaQ/YmgE family stress response membrane protein compare
HUW76_09990 -0.5 -2.4 tRNA-Gln compare
HUW76_05565 -0.5 -1.5 hemolysin compare
HUW76_00045 -0.5 -0.8 metallophosphoesterase compare
HUW76_06750 -0.5 -2.2 DNA starvation/stationary phase protection protein compare
HUW76_03900 -0.5 -2.9 YbaB/EbfC family nucleoid-associated protein compare
HUW76_00515 -0.5 -0.6 ribonucleoside-diphosphate reductase subunit alpha compare
HUW76_10645 -0.4 -2.1 adenine phosphoribosyltransferase compare
HUW76_02035 -0.4 -3.4 propanediol utilization microcompartment protein PduB compare
HUW76_10565 -0.4 -1.7 OmpA family protein compare
HUW76_02000 -0.4 -2.6 propanediol utilization microcompartment protein PduA compare
HUW76_06760 -0.4 -2.2 toxin-antitoxin system YwqK family antitoxin compare
HUW76_10345 -0.4 -2.2 YicC family protein compare
HUW76_00370 -0.4 -2.5 EutP/PduV family microcompartment system protein compare
HUW76_04035 -0.4 -1.1 polysaccharide deacetylase family protein compare
HUW76_09590 -0.4 -1.0 tRNA-Val compare
HUW76_05410 -0.4 -2.2 inositol phosphorylceramide synthase compare
HUW76_09940 -0.4 -2.3 type II toxin-antitoxin system YafQ family toxin compare
HUW76_03845 -0.4 -1.4 hypothetical protein compare
HUW76_07305 -0.4 -1.8 VWA domain-containing protein compare
HUW76_05685 -0.4 -2.3 MBL fold metallo-hydrolase compare
HUW76_03240 -0.4 -2.8 hypothetical protein compare
HUW76_06005 -0.4 -2.0 thioesterase family protein compare
HUW76_05395 -0.4 -2.8 cation transporter compare
HUW76_10575 -0.4 -0.7 hypothetical protein compare
HUW76_10215 -0.4 -2.9 diaminopimelate epimerase compare
HUW76_03840 -0.4 -1.3 hypothetical protein compare
HUW76_03270 -0.4 -0.9 AAA family ATPase compare
HUW76_08665 -0.4 -1.8 nuclear transport factor 2 family protein compare
HUW76_09425 -0.4 -3.1 acyl-CoA dehydrogenase family protein compare
HUW76_04235 -0.4 -1.8 16S rRNA (cytidine(1402)-2'-O)-methyltransferase compare
HUW76_00770 -0.4 -1.5 MliC family protein compare
HUW76_00525 -0.4 -2.0 thioredoxin family protein compare
HUW76_04425 -0.4 -1.8 chromate transporter compare
HUW76_01845 -0.4 -1.7 short-chain fatty acid transporter compare
HUW76_02815 -0.4 -2.1 DUF4911 domain-containing protein compare
HUW76_02315 -0.4 -1.5 hypothetical protein compare
HUW76_01705 -0.4 -2.3 hypothetical protein compare
HUW76_06905 -0.4 -1.0 AAA family ATPase compare
HUW76_04825 -0.4 -2.7 DUF3601 domain-containing protein compare
HUW76_04890 -0.4 -2.2 amidohydrolase family protein compare
HUW76_08400 -0.4 -0.5 hypothetical protein compare
HUW76_03865 -0.4 -2.3 cytidylate kinase-like family protein compare
HUW76_02580 -0.4 -1.0 MgtC/SapB family protein compare
HUW76_02810 -0.4 -2.9 ribosomal RNA small subunit methyltransferase A compare
HUW76_06615 -0.4 -2.2 DUF1007 family protein compare
HUW76_03315 -0.3 -2.5 sigma-70 family RNA polymerase sigma factor compare
HUW76_04110 -0.3 -2.2 uracil-DNA glycosylase compare
HUW76_07725 -0.3 -1.9 hypothetical protein compare
HUW76_10105 -0.3 -1.9 endolytic transglycosylase MltG compare
HUW76_04445 -0.3 -0.8 rRNA pseudouridine synthase compare
HUW76_03760 -0.3 -2.3 GNAT family N-acetyltransferase compare
HUW76_05830 -0.3 -1.8 YihY/virulence factor BrkB family protein compare
HUW76_02855 -0.3 -2.6 dipeptidase PepV compare
HUW76_00895 -0.3 -1.8 tRNA-Gly compare
HUW76_03660 -0.3 -2.5 Nif3-like dinuclear metal center hexameric protein compare
HUW76_04970 -0.3 -2.4 insulinase family protein compare
HUW76_08445 -0.3 -1.8 AAA family ATPase compare
HUW76_05055 -0.3 -1.9 IS200/IS605 family element transposase accessory protein TnpB compare
HUW76_07910 -0.3 -1.4 hypothetical protein compare
HUW76_05100 -0.3 -2.5 outer membrane protein transport protein compare
HUW76_05095 -0.3 -0.6 TetR/AcrR family transcriptional regulator compare
HUW76_02310 -0.3 -1.0 hypothetical protein compare
HUW76_06310 -0.3 -2.1 zinc ABC transporter substrate-binding protein compare
HUW76_04105 -0.3 -1.9 SMI1/KNR4 family protein compare
HUW76_02895 -0.3 -2.2 protein kinase compare
HUW76_01965 -0.3 -2.6 glycerol kinase GlpK compare
HUW76_05940 -0.3 -1.8 DUF4846 domain-containing protein compare
HUW76_01410 -0.3 -1.1 hypothetical protein compare
HUW76_05470 -0.3 -0.5 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB compare
HUW76_03690 -0.3 -1.7 energy transducer TonB compare
HUW76_03995 -0.3 -2.0 iron transporter compare
HUW76_01760 -0.3 -1.2 DJ-1/PfpI family protein compare
HUW76_04920 -0.3 -1.7 AzlD domain-containing protein compare
HUW76_02215 -0.3 -2.2 hypothetical protein compare
HUW76_07200 -0.3 -1.7 sensor histidine kinase compare
HUW76_03300 -0.3 -0.6 hypothetical protein compare
HUW76_04765 -0.3 -1.5 hypothetical protein compare
HUW76_03715 -0.3 -2.0 cupin domain-containing protein compare
HUW76_02540 -0.3 -1.8 sodium/glutamate symporter compare
HUW76_06705 -0.3 -2.0 CoA-disulfide reductase compare
HUW76_05040 -0.3 -2.0 HPr(Ser) kinase/phosphatase compare
HUW76_07965 -0.3 -1.7 MATE family efflux transporter compare
HUW76_02135 -0.3 -1.8 hypothetical protein compare
HUW76_06580 -0.3 -2.2 MFS transporter compare
HUW76_09075 -0.3 -1.7 PTS sugar transporter subunit IIA compare
HUW76_00900 -0.3 -1.3 tRNA-Ala compare
HUW76_00590 -0.3 -1.0 molecular chaperone DnaK compare
HUW76_00115 -0.3 -1.6 single-stranded DNA-binding protein compare
HUW76_07060 -0.3 -2.4 GTPase HflX compare
HUW76_10490 -0.3 -1.9 DUF3290 domain-containing protein compare
HUW76_04320 -0.3 -0.8 DUF5105 domain-containing protein compare
HUW76_09420 -0.3 -1.7 electron transfer flavoprotein subunit beta/FixA family protein compare
HUW76_06710 -0.3 -0.8 hypothetical protein compare
HUW76_05400 -0.3 -1.5 DUF4198 domain-containing protein compare
HUW76_09015 -0.3 -1.7 hypothetical protein compare
HUW76_07140 -0.3 -1.5 hypothetical protein compare
HUW76_02045 -0.3 -2.3 response regulator compare
HUW76_00430 -0.3 -1.4 ethanolamine utilization protein EutN compare
HUW76_04045 -0.3 -1.6 polysaccharide deacetylase family protein compare
HUW76_04255 -0.3 -1.0 DNA polymerase IV compare
HUW76_02190 -0.3 -0.7 hypothetical protein compare
HUW76_03695 -0.3 -1.1 DUF1858 domain-containing protein compare
HUW76_02435 -0.3 -1.5 redoxin family protein compare
HUW76_05645 -0.3 -1.6 methyltransferase compare
HUW76_00225 -0.3 -0.8 PD-(D/E)XK nuclease domain-containing protein compare
HUW76_04705 -0.3 -1.6 toxin-antitoxin system YwqK family antitoxin compare
HUW76_10020 -0.3 -1.7 tetratricopeptide repeat protein compare
HUW76_00710 -0.3 -2.0 EamA family transporter compare
HUW76_09100 -0.3 -1.6 GNAT family N-acetyltransferase compare
HUW76_10695 -0.3 -1.2 Fic family protein compare
HUW76_07505 -0.2 -1.7 FprA family A-type flavoprotein compare
HUW76_04060 -0.2 -1.0 hypothetical protein compare
HUW76_05855 -0.2 -1.9 glycogen synthase compare
HUW76_10465 -0.2 -1.8 DUF896 domain-containing protein compare
HUW76_08440 -0.2 -0.9 hypothetical protein compare
HUW76_09750 -0.2 -1.4 hypothetical protein compare
HUW76_06770 -0.2 -0.9 hypothetical protein compare
HUW76_10485 -0.2 -1.0 hypothetical protein compare
HUW76_06270 -0.2 -1.8 methionine ABC transporter ATP-binding protein compare
HUW76_03915 -0.2 -1.5 tetratricopeptide repeat protein compare
HUW76_04715 -0.2 -1.8 aspartate--ammonia ligase compare
HUW76_07350 -0.2 -1.0 regulatory protein RecX compare
HUW76_07470 -0.2 -1.5 epoxyqueuosine reductase QueH compare
HUW76_06505 -0.2 -2.1 OmpA family protein compare
HUW76_08670 -0.2 -1.7 hypothetical protein compare
HUW76_04515 -0.2 -1.9 methyltransferase domain-containing protein compare
HUW76_08260 -0.2 -1.8 acyl-CoA dehydrogenase family protein compare
HUW76_10025 -0.2 -0.6 hypothetical protein compare
HUW76_00120 -0.2 -0.7 hypothetical protein compare
HUW76_05215 -0.2 -1.0 hypothetical protein compare
HUW76_02320 -0.2 -1.3 hypothetical protein compare
HUW76_07720 -0.2 -1.6 DNA mismatch repair endonuclease MutL compare
HUW76_02735 -0.2 -1.6 replication-associated recombination protein A compare
HUW76_09475 -0.2 -0.9 ferredoxin family protein compare
HUW76_02870 -0.2 -1.8 molecular chaperone HtpG compare
HUW76_10095 -0.2 -1.8 hypothetical protein compare
HUW76_04655 -0.2 -1.6 hypothetical protein compare
HUW76_07260 -0.2 -1.1 hypothetical protein compare
HUW76_04815 -0.2 -1.4 hypothetical protein compare
HUW76_04640 -0.2 -1.2 septum formation protein Maf compare
HUW76_05510 -0.2 -1.6 MFS transporter compare
HUW76_01100 -0.2 -1.2 glutathione peroxidase compare
HUW76_01960 -0.2 -1.5 dihydroxyacetone kinase subunit DhaK compare
HUW76_08550 -0.2 -1.5 chemotaxis protein compare
HUW76_05430 -0.2 -0.6 Crp/Fnr family transcriptional regulator compare
HUW76_06650 -0.2 -1.4 thioredoxin family protein compare
HUW76_02600 -0.2 -1.2 response regulator transcription factor compare
HUW76_05560 -0.2 -0.2 hypothetical protein compare
HUW76_00310 -0.2 -0.6 hypothetical protein compare
HUW76_06435 -0.2 -1.5 DUF1446 domain-containing protein compare
HUW76_03545 -0.2 -0.8 type II toxin-antitoxin system RelB/DinJ family antitoxin compare
HUW76_02770 -0.2 -1.0 hypothetical protein compare
HUW76_00150 -0.2 -1.0 hypothetical protein compare
HUW76_05135 -0.2 -1.0 TIGR02206 family membrane protein compare
HUW76_02885 -0.2 -1.5 zeta toxin family protein compare
HUW76_06925 -0.2 -1.5 amino acid ABC transporter ATP-binding protein compare
HUW76_07115 -0.2 -0.6 pyridoxamine 5'-phosphate oxidase family protein compare
HUW76_02055 -0.2 -1.2 PocR ligand-binding domain-containing protein compare
HUW76_03870 -0.2 -1.0 hypothetical protein compare
HUW76_06380 -0.2 -1.9 DEAD/DEAH box helicase family protein compare
HUW76_03010 -0.2 -1.2 peptidylprolyl isomerase compare
HUW76_06440 -0.2 -1.3 hypothetical protein compare
HUW76_09585 -0.2 -0.6 tRNA-Asp compare
HUW76_10540 -0.2 -1.3 hypothetical protein compare
HUW76_04130 -0.2 -1.2 AEC family transporter compare
HUW76_00445 -0.2 -1.1 DUF861 domain-containing protein compare
HUW76_01875 -0.2 -1.3 hypothetical protein compare
HUW76_09010 -0.2 -1.0 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Fusobacterium nucleatum SB010 in time0_glycerolstock experiments