Experiment set3S208 for Fusobacterium nucleatum SB010

Compare to:

G1M1_D7

200 most important genes:

  gene name fitness t score description  
HUW76_03940 -8.8 -6.1 glycosyltransferase family 39 protein compare
HUW76_01385 -8.5 -5.9 glycosyltransferase compare
HUW76_01605 -8.3 -5.7 adenylosuccinate synthase compare
HUW76_01365 -8.2 -5.7 PIG-L family deacetylase compare
HUW76_03570 -8.2 -5.6 N-acetylmuramoyl-L-alanine amidase compare
HUW76_00590 -8.0 -1.9 molecular chaperone DnaK compare
HUW76_00745 -8.0 -12.3 ABC transporter permease compare
HUW76_10180 -8.0 -12.2 potassium transporter KtrB compare
HUW76_01350 -8.0 -5.5 nucleotide sugar dehydrogenase compare
HUW76_06130 -7.9 -7.7 extracellular solute-binding protein compare
HUW76_01195 -7.9 -4.2 hypothetical protein compare
HUW76_00740 -7.8 -7.6 ABC transporter permease compare
HUW76_00750 -7.7 -9.2 ABC transporter ATP-binding protein compare
HUW76_04250 -7.7 -5.3 hypothetical protein compare
HUW76_08815 -7.6 -5.3 alanine racemase compare
HUW76_04630 -7.6 -3.6 SMC-Scp complex subunit ScpB compare
HUW76_06795 -7.6 -5.2 tyrosine-type recombinase/integrase compare
HUW76_01725 -7.5 -10.3 hemolysin III family protein compare
HUW76_07115 -7.5 -3.5 pyridoxamine 5'-phosphate oxidase family protein compare
HUW76_05165 -7.4 -3.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
HUW76_03875 -7.2 -5.0 efflux RND transporter permease subunit compare
HUW76_03090 -7.2 -5.0 F0F1 ATP synthase subunit beta compare
HUW76_03880 -7.2 -5.0 efflux RND transporter periplasmic adaptor subunit compare
HUW76_02565 -7.1 -6.9 hypothetical protein compare
HUW76_03120 -7.1 -4.9 F0F1 ATP synthase subunit A compare
HUW76_02845 -7.1 -9.7 serine/threonine protein kinase compare
HUW76_05205 -7.1 -4.9 phosphoribosylamine--glycine ligase compare
HUW76_02615 -7.0 -10.8 MFS transporter compare
HUW76_09085 -7.0 -4.9 hypothetical protein compare
HUW76_05910 -7.0 -4.8 AMP-binding protein compare
HUW76_03100 -7.0 -4.8 F0F1 ATP synthase subunit alpha compare
HUW76_07545 -7.0 -4.8 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
HUW76_03105 -6.9 -4.8 ATP synthase F1 subunit delta compare
HUW76_02085 -6.9 -4.8 energy transducer TonB compare
HUW76_05045 -6.9 -4.8 bifunctional oligoribonuclease/PAP phosphatase NrnA compare
HUW76_10175 -6.9 -6.7 TrkA family potassium uptake protein compare
HUW76_01380 -6.9 -4.7 Gfo/Idh/MocA family oxidoreductase compare
HUW76_01335 -6.8 -4.7 acetyltransferase compare
HUW76_02070 -6.8 -4.7 hypothetical protein compare
HUW76_04230 -6.8 -4.7 S41 family peptidase compare
HUW76_03140 -6.8 -4.7 adenylosuccinate lyase compare
HUW76_05485 -6.8 -8.1 GTP pyrophosphokinase compare
HUW76_09080 -6.8 -4.7 DNA repair protein RecO compare
HUW76_02075 -6.8 -4.7 MotA/TolQ/ExbB proton channel family protein compare
HUW76_10320 -6.8 -24.0 acetyltransferase compare
HUW76_02820 -6.8 -8.1 KH domain-containing protein compare
HUW76_03885 -6.7 -4.7 TolC family protein compare
HUW76_03115 -6.7 -4.6 ATP synthase F0 subunit C compare
HUW76_03125 -6.7 -4.6 hypothetical protein compare
HUW76_10065 -6.6 -7.9 RidA family protein compare
HUW76_05105 -6.6 -4.6 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
HUW76_08750 -6.6 -10.2 carbamoyl-phosphate synthase large subunit compare
HUW76_02065 -6.6 -7.9 tetratricopeptide repeat protein compare
HUW76_08070 -6.6 -7.9 ABC transporter permease compare
HUW76_04410 -6.6 -3.5 hypothetical protein compare
HUW76_06560 -6.6 -6.4 ROK family protein compare
HUW76_04790 -6.6 -4.5 sodium/glutamate symporter compare
HUW76_01355 -6.6 -4.5 DegT/DnrJ/EryC1/StrS family aminotransferase compare
HUW76_01375 -6.5 -4.5 glycosyltransferase family 4 protein compare
HUW76_02965 -6.5 -4.5 OmpA family protein compare
HUW76_05175 -6.5 -4.5 phosphoribosylformylglycinamidine cyclo-ligase compare
HUW76_08730 -6.4 -6.3 orotidine-5'-phosphate decarboxylase compare
HUW76_02855 -6.4 -14.2 dipeptidase PepV compare
HUW76_05170 -6.4 -7.6 amidophosphoribosyltransferase compare
HUW76_01390 -6.4 -3.9 O-antigen ligase family protein compare
HUW76_01525 -6.4 -8.8 alkaline shock response membrane anchor protein AmaP compare
HUW76_10760 -6.4 -7.6 KH domain-containing protein compare
HUW76_01330 -6.4 -4.4 LegC family aminotransferase compare
HUW76_04955 -6.3 -2.7 CvpA family protein compare
HUW76_04585 -6.3 -12.9 DUF1576 domain-containing protein compare
HUW76_09280 -6.3 -4.4 6,7-dimethyl-8-ribityllumazine synthase compare
HUW76_09285 -6.3 -9.6 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
HUW76_03110 -6.3 -3.8 F0F1 ATP synthase subunit B compare
HUW76_01325 -6.3 -4.3 polysaccharide biosynthesis protein compare
HUW76_05110 -6.2 -4.3 dethiobiotin synthase compare
HUW76_05180 -6.2 -13.9 phosphoribosylglycinamide formyltransferase compare
HUW76_01460 -6.2 -6.0 YebC/PmpR family DNA-binding transcriptional regulator compare
HUW76_08760 -6.1 -16.4 dihydroorotase compare
HUW76_02810 -6.1 -16.5 ribosomal RNA small subunit methyltransferase A compare
HUW76_08065 -6.1 -4.2 peptidoglycan DD-metalloendopeptidase family protein compare
HUW76_06045 -6.1 -11.7 PLP-dependent aminotransferase family protein compare
HUW76_06775 -6.0 -9.1 alpha/beta hydrolase compare
HUW76_03890 -6.0 -4.1 TetR/AcrR family transcriptional regulator compare
HUW76_05195 -6.0 -8.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
HUW76_07420 -6.0 -9.1 hypothetical protein compare
HUW76_02105 -6.0 -11.4 50S ribosomal protein L9 compare
HUW76_01360 -5.9 -4.1 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase compare
HUW76_09055 -5.9 -3.9 ACT domain-containing protein compare
HUW76_07210 -5.9 -4.1 PepSY domain-containing protein compare
HUW76_05755 -5.9 -4.1 site-specific integrase compare
HUW76_01340 -5.9 -4.1 sugar transferase compare
HUW76_10325 -5.9 -4.1 sodium-translocating pyrophosphatase compare
HUW76_01200 -5.8 -4.0 ATP-binding protein compare
HUW76_06040 -5.8 -6.9 pyridoxal 5'-phosphate synthase lyase subunit PdxS compare
HUW76_07400 -5.8 -2.7 preprotein translocase subunit SecG compare
HUW76_00600 -5.8 -4.0 molecular chaperone DnaJ compare
HUW76_05725 -5.8 -5.7 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
HUW76_08720 -5.8 -12.4 orotate phosphoribosyltransferase compare
HUW76_04190 -5.8 -4.0 LytR C-terminal domain-containing protein compare
HUW76_08740 -5.7 -19.4 dihydroorotate dehydrogenase compare
HUW76_01140 -5.7 -24.6 DegV family protein compare
HUW76_10170 -5.7 -3.9 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
HUW76_09035 -5.6 -3.9 adenine phosphoribosyltransferase compare
HUW76_05450 -5.6 -3.9 hypothetical protein compare
HUW76_07655 -5.6 -3.9 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
HUW76_09600 -5.6 -4.3 tRNA-Ser compare
HUW76_07620 -5.5 -3.8 type B 50S ribosomal protein L31 compare
HUW76_03085 -5.5 -6.0 ATP synthase F1 subunit epsilon compare
HUW76_10550 -5.5 -8.8 hypothetical protein compare
HUW76_04390 -5.5 -5.4 DNA-binding protein WhiA compare
HUW76_07055 -5.5 -3.8 shikimate kinase compare
HUW76_01635 -5.5 -10.5 cytidine deaminase compare
HUW76_01700 -5.5 -8.4 glucosaminidase domain-containing protein compare
HUW76_07570 -5.5 -3.8 acetyl-CoA C-acetyltransferase compare
HUW76_00760 -5.5 -11.7 HPr family phosphocarrier protein compare
HUW76_02360 -5.5 -15.8 septum site-determining protein MinC compare
HUW76_09290 -5.4 -7.4 riboflavin synthase compare
HUW76_01050 -5.4 -3.7 trigger factor compare
HUW76_10015 -5.4 -1.3 tRNA-Pro compare
HUW76_05115 -5.3 -3.7 biotin synthase BioB compare
HUW76_00765 -5.3 -3.6 phosphoenolpyruvate--protein phosphotransferase compare
HUW76_01060 -5.2 -3.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
HUW76_05155 -5.2 -15.3 phosphoribosylformylglycinamidine synthase compare
HUW76_01065 -5.2 -10.5 endopeptidase La compare
HUW76_05605 -5.2 -6.1 PTS glucose transporter subunit IIA compare
HUW76_05160 -5.1 -5.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
HUW76_08765 -5.1 -7.0 aspartate carbamoyltransferase catalytic subunit compare
HUW76_03095 -5.1 -3.5 ATP synthase F1 subunit gamma compare
HUW76_09070 -5.1 -10.0 transcriptional repressor NrdR compare
HUW76_02080 -5.1 -2.3 biopolymer transporter ExbD compare
HUW76_02560 -5.0 -8.4 leucine-rich repeat domain-containing protein compare
HUW76_02340 -5.0 -7.9 RNA-binding protein compare
HUW76_05005 -5.0 -3.5 enoyl-CoA hydratase/isomerase family protein compare
HUW76_09050 -5.0 -5.9 HlyC/CorC family transporter compare
HUW76_10455 -5.0 -8.3 toxin-antitoxin system YwqK family antitoxin compare
HUW76_08875 -4.9 -6.7 cell division protein FtsA compare
HUW76_09075 -4.9 -8.9 PTS sugar transporter subunit IIA compare
HUW76_08145 -4.9 -21.4 PTS sugar transporter subunit IIA compare
HUW76_02850 -4.9 -11.3 VacJ family lipoprotein compare
HUW76_06010 -4.9 -3.4 thiamine diphosphokinase compare
HUW76_07895 -4.9 -5.8 aminopeptidase P family protein compare
HUW76_08745 -4.8 -13.5 dihydroorotate dehydrogenase electron transfer subunit compare
HUW76_04400 -4.8 -4.7 segregation/condensation protein A compare
HUW76_09670 -4.8 -19.0 endonuclease MutS2 compare
HUW76_10775 -4.7 -10.7 helix-turn-helix domain-containing protein compare
HUW76_04170 -4.7 -3.3 Holliday junction branch migration DNA helicase RuvB compare
HUW76_04360 -4.7 -15.0 protein translocase subunit SecD compare
HUW76_01160 -4.7 -1.1 IS200/IS605 family element transposase accessory protein TnpB compare
HUW76_05720 -4.7 -5.5 DUF452 family protein compare
HUW76_03635 -4.7 -3.2 sigma-54-dependent Fis family transcriptional regulator compare
HUW76_07650 -4.6 -13.7 transcription termination factor Rho compare
HUW76_02910 -4.6 -1.5 tRNA-Ser compare
HUW76_04915 -4.5 -7.6 GNAT family N-acetyltransferase compare
HUW76_08140 -4.5 -12.5 1-phosphofructokinase compare
HUW76_06655 -4.5 -3.1 Holliday junction branch migration protein RuvA compare
HUW76_01020 -4.4 -3.0 ribosome maturation factor RimP compare
HUW76_04050 -4.4 -3.1 glycosyltransferase compare
HUW76_04785 -4.4 -9.0 urocanate hydratase compare
HUW76_02170 -4.4 -10.3 hypothetical protein compare
HUW76_07705 -4.4 -1.7 hypothetical protein compare
HUW76_10815 -4.4 -8.4 hypothetical protein compare
HUW76_05010 -4.4 -2.0 3-hydroxybutyryl-CoA dehydrogenase compare
HUW76_04365 -4.3 -13.8 protein translocase subunit SecF compare
HUW76_00830 -4.3 -3.0 bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1 compare
HUW76_01465 -4.3 -3.0 ATP-dependent DNA helicase RecG compare
HUW76_05715 -4.2 -9.7 malonyl-ACP O-methyltransferase BioC compare
HUW76_06480 -4.2 -2.9 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
HUW76_10675 -4.2 -1.4 RNA-binding S4 domain-containing protein compare
HUW76_04210 -4.1 -3.9 ribosome assembly RNA-binding protein YhbY compare
HUW76_07535 -4.1 -2.6 LysR family transcriptional regulator compare
HUW76_02815 -4.1 -5.7 DUF4911 domain-containing protein compare
HUW76_03145 -4.1 -8.2 ribosomal protein S18-alanine N-acetyltransferase compare
HUW76_07275 -4.1 -2.3 cell division protein SepF compare
HUW76_06080 -4.1 -1.4 HD domain-containing protein compare
HUW76_06690 -4.0 -2.8 PP2C family protein-serine/threonine phosphatase compare
HUW76_09090 -4.0 -1.0 rod shape-determining protein MreC compare
HUW76_06700 -4.0 -2.8 RNase adapter RapZ compare
HUW76_05620 -4.0 -2.5 adenosylcobinamide-GDP ribazoletransferase compare
HUW76_05630 -3.9 -1.6 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
HUW76_06530 -3.9 -2.7 chromosome segregation protein SMC compare
HUW76_10120 -3.9 -1.9 30S ribosomal protein S15 compare
HUW76_06495 -3.9 -17.7 AMP-binding protein compare
HUW76_08785 -3.9 -2.7 recombination protein RecR compare
HUW76_05825 -3.9 -1.7 transpeptidase family protein compare
HUW76_00325 -3.9 -2.7 HAMP domain-containing histidine kinase compare
HUW76_10395 -3.9 -6.1 50S ribosomal protein L33 compare
HUW76_06575 -3.9 -16.0 galactose/methyl galactoside ABC transporter permease MglC compare
HUW76_04550 -3.9 -2.7 imidazolonepropionase compare
HUW76_03990 -3.8 -4.1 hypothetical protein compare
HUW76_01030 -3.8 -2.5 DUF448 domain-containing protein compare
HUW76_10855 -3.8 -4.5 hypothetical protein compare
HUW76_10380 -3.8 -1.3 transcription termination/antitermination factor NusG compare
HUW76_05050 -3.8 -1.8 cell division protein SepF compare
HUW76_07605 -3.8 -2.6 lactate dehydrogenase compare
HUW76_07355 -3.8 -2.6 recombinase RecA compare
HUW76_05625 -3.7 -4.8 histidine phosphatase family protein compare
HUW76_05445 -3.7 -11.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
HUW76_08405 -3.7 -18.4 CCA tRNA nucleotidyltransferase compare
HUW76_09830 -3.7 -2.5 hypothetical protein compare
HUW76_00550 -3.6 -1.7 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Fusobacterium nucleatum SB010 in mouse experiments