Experiment set3S159 for Rhizobium sp. OAE497

Compare to:

R2A with 3-octanone 10.6206 mM

200 most important genes:

  gene name fitness t score description  
ABIE40_RS18300 -5.8 -5.7 DsbE family thiol:disulfide interchange protein compare
ABIE40_RS02855 -4.7 -18.4 glycosyltransferase family 39 protein compare
ABIE40_RS05685 -4.5 -6.9 heme lyase CcmF/NrfE family subunit compare
ABIE40_RS03095 -4.1 -4.1 flagellar biosynthesis repressor FlbT compare
ABIE40_RS12860 -4.0 -1.2 Lrp/AsnC family transcriptional regulator compare
ABIE40_RS14850 -4.0 -5.4 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE40_RS15010 -3.9 -12.2 metallophosphoesterase compare
ABIE40_RS06265 -3.9 -2.6 SDR family NAD(P)-dependent oxidoreductase compare
ABIE40_RS27405 -3.8 -1.9 hypothetical protein compare
ABIE40_RS20460 -3.8 -2.4 precorrin-3B synthase compare
ABIE40_RS09545 -3.7 -2.1 anthranilate phosphoribosyltransferase compare
ABIE40_RS06565 -3.7 -3.4 AI-2E family transporter compare
ABIE40_RS18290 -3.7 -11.0 heme ABC transporter permease compare
ABIE40_RS19480 -3.6 -3.4 DUF1402 family protein compare
ABIE40_RS05680 -3.5 -6.3 cytochrome c maturation protein CcmE compare
ABIE40_RS09170 -3.5 -2.4 cytochrome c biogenesis CcdA family protein compare
ABIE40_RS28600 -3.5 -1.0 FAD-dependent oxidoreductase compare
ABIE40_RS01015 -3.5 -3.4 NrsF family protein compare
ABIE40_RS05690 -3.4 -5.7 cytochrome c-type biogenesis protein compare
ABIE40_RS09660 -3.4 -12.7 AI-2E family transporter compare
ABIE40_RS11095 -3.4 -4.0 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS30865 -3.4 -1.7 CheR family methyltransferase compare
ABIE40_RS07480 -3.3 -7.4 DUF2155 domain-containing protein compare
ABIE40_RS08980 -3.2 -7.0 transcriptional repressor LexA compare
ABIE40_RS19030 -3.2 -3.4 hypothetical protein compare
ABIE40_RS04070 -3.2 -5.6 heme o synthase compare
ABIE40_RS21840 -3.1 -1.5 lysophospholipid acyltransferase family protein compare
ABIE40_RS30835 -3.1 -3.0 cytochrome c oxidase subunit 3 compare
ABIE40_RS15650 -3.1 -4.6 TIGR00282 family metallophosphoesterase compare
ABIE40_RS19330 -3.0 -2.9 phosphoribosylanthranilate isomerase compare
ABIE40_RS28165 -3.0 -2.5 hypothetical protein compare
ABIE40_RS03735 -3.0 -2.7 antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein compare
ABIE40_RS25500 -3.0 -0.9 type II toxin-antitoxin system ParD family antitoxin compare
ABIE40_RS06420 -3.0 -8.4 phosphatase PAP2 family protein compare
ABIE40_RS12360 -3.0 -8.1 DUF5131 family protein compare
ABIE40_RS08365 -3.0 -4.2 hypothetical protein compare
ABIE40_RS17570 -2.9 -6.5 YdcF family protein compare
ABIE40_RS07105 -2.9 -2.4 DNA-binding protein HupB compare
ABIE40_RS10725 -2.9 -3.4 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS29850 -2.9 -1.2 IS110 family transposase compare
ABIE40_RS03840 -2.8 -9.7 aromatic ring-hydroxylating dioxygenase subunit alpha compare
ABIE40_RS01930 -2.8 -1.4 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS27440 -2.8 -1.4 DUF4112 domain-containing protein compare
ABIE40_RS08225 -2.8 -5.0 TetR/AcrR family transcriptional regulator compare
ABIE40_RS20445 -2.8 -1.1 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS23940 -2.8 -7.7 TetR/AcrR family transcriptional regulator compare
ABIE40_RS04770 -2.8 -5.2 TetR/AcrR family transcriptional regulator compare
ABIE40_RS19260 -2.7 -1.9 DNA polymerase III subunit epsilon compare
ABIE40_RS27900 -2.7 -1.1 S4 domain-containing protein compare
ABIE40_RS19700 -2.7 -1.9 MBL fold metallo-hydrolase compare
ABIE40_RS28765 -2.7 -1.1 chemotaxis protein CheX compare
ABIE40_RS10425 -2.7 -6.0 ABC transporter ATP-binding protein compare
ABIE40_RS04065 -2.6 -13.5 cytochrome c oxidase subunit I compare
ABIE40_RS08140 -2.6 -10.4 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS10100 -2.6 -4.3 branched-chain amino acid ABC transporter substrate-binding protein compare
ABIE40_RS19265 -2.6 -2.8 protein-export chaperone SecB compare
ABIE40_RS14220 -2.6 -1.5 efflux transporter outer membrane subunit compare
ABIE40_RS17565 -2.6 -1.6 ABC transporter permease compare
ABIE40_RS27475 -2.6 -1.5 PRC-barrel domain-containing protein compare
ABIE40_RS15855 -2.6 -1.9 cell division protein ZapA compare
ABIE40_RS00650 -2.6 -2.8 DUF2735 domain-containing protein compare
ABIE40_RS05715 -2.5 -5.8 PAS domain-containing sensor histidine kinase compare
ABIE40_RS06555 -2.5 -1.4 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS00340 -2.5 -2.4 30S ribosome-binding factor RbfA compare
ABIE40_RS00725 -2.5 -1.7 DNA cytosine methyltransferase compare
ABIE40_RS02305 -2.4 -7.0 phosphate signaling complex protein PhoU compare
ABIE40_RS09795 -2.4 -8.7 heparan-alpha-glucosaminide N-acetyltransferase compare
ABIE40_RS20370 -2.4 -0.9 type II toxin-antitoxin system Phd/YefM family antitoxin compare
ABIE40_RS19365 -2.4 -2.3 double-strand break repair protein AddB compare
ABIE40_RS19375 -2.4 -5.7 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE compare
ABIE40_RS17650 -2.4 -2.8 cobaltochelatase subunit CobS compare
ABIE40_RS04305 -2.3 -1.9 Arc family DNA-binding protein compare
ABIE40_RS19385 -2.3 -7.8 adenosylhomocysteinase compare
ABIE40_RS04060 -2.3 -8.9 cytochrome c oxidase subunit II compare
ABIE40_RS27020 -2.3 -2.5 hypothetical protein compare
ABIE40_RS09095 -2.3 -1.6 PAS domain-containing sensor histidine kinase compare
ABIE40_RS20435 -2.3 -1.6 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS11995 -2.3 -1.3 TIGR01244 family sulfur transferase compare
ABIE40_RS18555 -2.3 -2.7 EF-P lysine aminoacylase EpmA compare
ABIE40_RS10715 -2.3 -3.4 diacylglycerol kinase compare
ABIE40_RS17645 -2.3 -3.1 cobaltochelatase subunit CobT compare
ABIE40_RS02405 -2.3 -2.6 response regulator transcription factor compare
ABIE40_RS06775 -2.3 -2.9 DUF177 domain-containing protein compare
ABIE40_RS16660 -2.3 -3.6 GTP-binding protein compare
ABIE40_RS12845 -2.3 -3.5 glycosyltransferase family 4 protein compare
ABIE40_RS19465 -2.2 -2.1 ATP-dependent protease subunit HslV compare
ABIE40_RS09540 -2.2 -5.1 peptidylprolyl isomerase compare
ABIE40_RS21025 -2.2 -6.0 VOC family protein compare
ABIE40_RS10390 -2.2 -1.4 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE40_RS13410 -2.2 -4.2 anthranilate synthase compare
ABIE40_RS05695 -2.2 -1.5 Do family serine endopeptidase compare
ABIE40_RS25740 -2.2 -6.9 FadR/GntR family transcriptional regulator compare
ABIE40_RS00410 -2.1 -1.8 hypothetical protein compare
ABIE40_RS17585 -2.1 -1.4 DUF2125 domain-containing protein compare
ABIE40_RS09980 -2.1 -2.2 Fe-S cluster assembly scaffold SufA compare
ABIE40_RS16070 -2.1 -2.4 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS03080 -2.1 -9.4 flagellar hook-associated protein FlgK compare
ABIE40_RS06720 -2.1 -1.6 transcriptional regulator NrdR compare
ABIE40_RS17290 -2.1 -6.2 peptide chain release factor N(5)-glutamine methyltransferase compare
ABIE40_RS02920 -2.0 -8.5 helix-turn-helix transcriptional regulator compare
ABIE40_RS19360 -2.0 -3.0 double-strand break repair helicase AddA compare
ABIE40_RS11155 -2.0 -6.4 cobaltochelatase subunit CobN compare
ABIE40_RS11105 -2.0 -5.4 cobyrinate a,c-diamide synthase compare
ABIE40_RS03515 -2.0 -3.9 glutamate--cysteine ligase compare
ABIE40_RS04115 -2.0 -1.5 ribonuclease HI compare
ABIE40_RS01055 -2.0 -5.3 translation elongation factor 4 compare
ABIE40_RS06390 -2.0 -5.3 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA compare
ABIE40_RS11740 -2.0 -6.7 SCO family protein compare
ABIE40_RS15940 -2.0 -1.9 YegP family protein compare
ABIE40_RS02265 -1.9 -5.5 regulator compare
ABIE40_RS29185 -1.9 -2.3 hypothetical protein compare
ABIE40_RS11605 -1.9 -2.6 AsmA-like C-terminal region-containing protein compare
ABIE40_RS02720 -1.9 -2.2 DUF2948 family protein compare
ABIE40_RS11530 -1.9 -5.6 protease modulator HflC compare
ABIE40_RS30915 -1.9 -0.8 hypothetical protein compare
ABIE40_RS00595 -1.9 -5.0 glucokinase compare
ABIE40_RS19805 -1.9 -1.9 hypothetical protein compare
ABIE40_RS24355 -1.9 -4.3 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS14980 -1.9 -4.6 glycoside hydrolase family 16 protein compare
ABIE40_RS27210 -1.9 -1.6 HupE/UreJ family protein compare
ABIE40_RS16840 -1.9 -3.9 TetR/AcrR family transcriptional regulator compare
ABIE40_RS03685 -1.9 -1.8 hypothetical protein compare
ABIE40_RS12855 -1.9 -6.3 glycosyltransferase family 2 protein compare
ABIE40_RS30230 -1.8 -1.7 CsbD family protein compare
ABIE40_RS22300 -1.8 -3.0 superoxide dismutase compare
ABIE40_RS17560 -1.8 -2.4 cell division ATP-binding protein FtsE compare
ABIE40_RS12985 -1.8 -4.8 ATP-binding protein compare
ABIE40_RS30720 -1.8 -0.7 hypothetical protein compare
ABIE40_RS17575 -1.8 -6.2 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
ABIE40_RS29330 -1.8 -4.1 helix-turn-helix domain-containing protein compare
ABIE40_RS29780 -1.8 -1.3 hypothetical protein compare
ABIE40_RS07045 -1.8 -1.7 MarR family winged helix-turn-helix transcriptional regulator compare
ABIE40_RS27015 -1.8 -1.4 ATP-dependent DNA ligase compare
ABIE40_RS01705 -1.8 -5.5 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
ABIE40_RS13125 -1.8 -8.5 cytochrome b N-terminal domain-containing protein compare
ABIE40_RS02345 -1.8 -2.3 2'-deoxycytidine 5'-triphosphate deaminase compare
ABIE40_RS10155 -1.8 -1.5 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS19470 -1.8 -1.2 GNAT family N-acetyltransferase compare
ABIE40_RS30565 -1.8 -2.2 hypothetical protein compare
ABIE40_RS18720 -1.7 -1.8 polyprenyl synthetase family protein compare
ABIE40_RS10720 -1.7 -1.5 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS00630 -1.7 -6.0 ABC transporter ATP-binding protein compare
ABIE40_RS20440 -1.7 -1.4 cobalt-precorrin-6A reductase compare
ABIE40_RS11175 -1.7 -4.2 cobyric acid synthase compare
ABIE40_RS18285 -1.7 -4.7 heme exporter protein CcmB compare
ABIE40_RS29965 -1.7 -2.4 DUF1778 domain-containing protein compare
ABIE40_RS05545 -1.7 -1.5 Dabb family protein compare
ABIE40_RS00235 -1.7 -4.5 cytochrome c family protein compare
ABIE40_RS11165 -1.7 -1.3 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS10180 -1.7 -3.4 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS04085 -1.7 -6.2 cytochrome c oxidase subunit 3 compare
ABIE40_RS08410 -1.7 -1.7 hypothetical protein compare
ABIE40_RS08970 -1.7 -7.5 citrate synthase compare
ABIE40_RS05560 -1.7 -2.8 ribbon-helix-helix protein, CopG family compare
ABIE40_RS18550 -1.7 -4.1 lysine-2,3-aminomutase-like protein compare
ABIE40_RS11150 -1.7 -5.3 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS05385 -1.6 -2.2 Nramp family divalent metal transporter compare
ABIE40_RS11645 -1.6 -5.5 OmpA family protein compare
ABIE40_RS17450 -1.6 -8.3 YqaA family protein compare
ABIE40_RS03750 -1.6 -3.7 hypothetical protein compare
ABIE40_RS02915 -1.6 -5.5 helix-turn-helix transcriptional regulator compare
ABIE40_RS14785 -1.6 -2.9 hypothetical protein compare
ABIE40_RS19705 -1.6 -6.1 polysaccharide deacetylase family protein compare
ABIE40_RS13620 -1.6 -4.6 tetratricopeptide repeat protein compare
ABIE40_RS05025 -1.6 -4.3 MucR family transcriptional regulator compare
ABIE40_RS27050 -1.6 -2.4 hypothetical protein compare
ABIE40_RS00155 -1.6 -7.6 ribonuclease D compare
ABIE40_RS17525 -1.6 -1.1 lipoprotein compare
ABIE40_RS13670 -1.6 -2.6 type II toxin-antitoxin system prevent-host-death family antitoxin compare
ABIE40_RS11070 -1.6 -3.4 beta-ketoacyl-ACP synthase compare
ABIE40_RS29910 -1.6 -2.1 hypothetical protein compare
ABIE40_RS10430 -1.6 -7.0 MlaE family lipid ABC transporter permease subunit compare
ABIE40_RS13130 -1.6 -5.4 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABIE40_RS15470 -1.6 -2.3 hypothetical protein compare
ABIE40_RS11900 -1.6 -1.9 N-acetylmuramoyl-L-alanine amidase compare
ABIE40_RS11905 -1.6 -1.5 DnaJ family molecular chaperone compare
ABIE40_RS18800 -1.6 -6.4 glucoamylase family protein compare
ABIE40_RS11520 -1.5 -4.6 DegQ family serine endoprotease compare
ABIE40_RS10420 -1.5 -5.0 MCE family protein compare
ABIE40_RS23685 -1.5 -3.3 hypothetical protein compare
ABIE40_RS11720 -1.5 -8.1 aminopeptidase P family protein compare
ABIE40_RS03340 -1.5 -4.9 iron-responsive transcriptional regulator RirA compare
ABIE40_RS24875 -1.5 -6.0 bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase compare
ABIE40_RS13455 -1.5 -7.3 DUF2333 family protein compare
ABIE40_RS04050 -1.5 -7.6 metalloprotease TldD compare
ABIE40_RS15760 -1.5 -3.7 Holliday junction branch migration DNA helicase RuvB compare
ABIE40_RS26820 -1.5 -1.3 DUF982 domain-containing protein compare
ABIE40_RS19130 -1.5 -2.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS09690 -1.5 -1.8 hypothetical protein compare
ABIE40_RS00625 -1.5 -5.4 ABC transporter permease compare
ABIE40_RS15745 -1.5 -3.0 Holliday junction branch migration protein RuvA compare
ABIE40_RS18280 -1.5 -2.3 heme ABC exporter ATP-binding protein CcmA compare
ABIE40_RS03790 -1.5 -5.0 DUF4170 domain-containing protein compare
ABIE40_RS20430 -1.5 -1.8 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS14460 -1.5 -5.0 response regulator compare
ABIE40_RS08935 -1.5 -1.0 RIP metalloprotease RseP compare
ABIE40_RS12425 -1.5 -4.3 hypothetical protein compare
ABIE40_RS05210 -1.5 -4.1 DUF1254 domain-containing protein compare
ABIE40_RS28100 -1.4 -2.2 PRC-barrel domain-containing protein compare
ABIE40_RS30550 -1.4 -2.7 DUF2243 domain-containing protein compare


Specific Phenotypes

For 8 genes in this experiment

For stress 3-octanone in Rhizobium sp. OAE497

For stress 3-octanone across organisms