Experiment set3S154 for Rhizobium sp. OAE497

Compare to:

R2A with 3-octanone 5.3129 mM

200 most important genes:

  gene name fitness t score description  
ABIE40_RS18300 -6.0 -4.1 DsbE family thiol:disulfide interchange protein compare
ABIE40_RS07105 -5.0 -2.7 DNA-binding protein HupB compare
ABIE40_RS05685 -4.0 -9.0 heme lyase CcmF/NrfE family subunit compare
ABIE40_RS18290 -4.0 -9.7 heme ABC transporter permease compare
ABIE40_RS04305 -3.9 -2.4 Arc family DNA-binding protein compare
ABIE40_RS00950 -3.9 -1.2 hypothetical protein compare
ABIE40_RS10720 -3.8 -2.3 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS06265 -3.7 -2.3 SDR family NAD(P)-dependent oxidoreductase compare
ABIE40_RS17565 -3.6 -2.0 ABC transporter permease compare
ABIE40_RS29965 -3.6 -2.5 DUF1778 domain-containing protein compare
ABIE40_RS05680 -3.6 -6.3 cytochrome c maturation protein CcmE compare
ABIE40_RS26805 -3.6 -1.9 chaperone modulator CbpM compare
ABIE40_RS06555 -3.6 -1.8 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS10425 -3.6 -6.4 ABC transporter ATP-binding protein compare
ABIE40_RS09545 -3.6 -2.2 anthranilate phosphoribosyltransferase compare
ABIE40_RS28600 -3.5 -1.1 FAD-dependent oxidoreductase compare
ABIE40_RS10155 -3.4 -2.1 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS12360 -3.3 -7.0 DUF5131 family protein compare
ABIE40_RS09170 -3.1 -3.0 cytochrome c biogenesis CcdA family protein compare
ABIE40_RS25500 -3.0 -0.9 type II toxin-antitoxin system ParD family antitoxin compare
ABIE40_RS27440 -3.0 -1.5 DUF4112 domain-containing protein compare
ABIE40_RS05715 -2.9 -5.5 PAS domain-containing sensor histidine kinase compare
ABIE40_RS04070 -2.9 -5.4 heme o synthase compare
ABIE40_RS15650 -2.9 -4.3 TIGR00282 family metallophosphoesterase compare
ABIE40_RS05690 -2.9 -3.5 cytochrome c-type biogenesis protein compare
ABIE40_RS20315 -2.8 -0.9 type II toxin-antitoxin system VapB family antitoxin compare
ABIE40_RS19330 -2.8 -3.3 phosphoribosylanthranilate isomerase compare
ABIE40_RS01930 -2.7 -1.4 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS19480 -2.7 -4.1 DUF1402 family protein compare
ABIE40_RS22300 -2.7 -1.9 superoxide dismutase compare
ABIE40_RS24490 -2.7 -0.8 flavin reductase compare
ABIE40_RS11165 -2.7 -1.6 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS30220 -2.7 -0.8 hypothetical protein compare
ABIE40_RS02345 -2.7 -1.8 2'-deoxycytidine 5'-triphosphate deaminase compare
ABIE40_RS09660 -2.6 -10.4 AI-2E family transporter compare
ABIE40_RS17525 -2.6 -1.7 lipoprotein compare
ABIE40_RS24245 -2.6 -1.8 helix-turn-helix domain-containing protein compare
ABIE40_RS13410 -2.5 -3.4 anthranilate synthase compare
ABIE40_RS01720 -2.5 -2.9 N-acetyltransferase compare
ABIE40_RS26820 -2.5 -2.1 DUF982 domain-containing protein compare
ABIE40_RS10180 -2.5 -2.4 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS05385 -2.5 -1.7 Nramp family divalent metal transporter compare
ABIE40_RS19700 -2.5 -2.4 MBL fold metallo-hydrolase compare
ABIE40_RS16660 -2.4 -3.5 GTP-binding protein compare
ABIE40_RS30655 -2.4 -1.3 hypothetical protein compare
ABIE40_RS20370 -2.4 -1.0 type II toxin-antitoxin system Phd/YefM family antitoxin compare
ABIE40_RS06720 -2.4 -2.5 transcriptional regulator NrdR compare
ABIE40_RS00725 -2.3 -1.6 DNA cytosine methyltransferase compare
ABIE40_RS03515 -2.3 -4.3 glutamate--cysteine ligase compare
ABIE40_RS15010 -2.3 -8.3 metallophosphoesterase compare
ABIE40_RS17560 -2.3 -2.7 cell division ATP-binding protein FtsE compare
ABIE40_RS19385 -2.3 -7.5 adenosylhomocysteinase compare
ABIE40_RS08365 -2.3 -3.5 hypothetical protein compare
ABIE40_RS15760 -2.3 -4.4 Holliday junction branch migration DNA helicase RuvB compare
ABIE40_RS11065 -2.3 -1.5 zinc-binding dehydrogenase compare
ABIE40_RS27920 -2.2 -2.8 SDR family oxidoreductase compare
ABIE40_RS05785 -2.2 -1.4 type II toxin-antitoxin system VapB family antitoxin compare
ABIE40_RS27500 -2.2 -2.1 PPC domain-containing DNA-binding protein compare
ABIE40_RS02855 -2.2 -13.2 glycosyltransferase family 39 protein compare
ABIE40_RS11875 -2.2 -1.7 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABIE40_RS14980 -2.2 -4.6 glycoside hydrolase family 16 protein compare
ABIE40_RS20460 -2.2 -1.9 precorrin-3B synthase compare
ABIE40_RS04485 -2.2 -1.5 Rrf2 family transcriptional regulator compare
ABIE40_RS05695 -2.1 -1.5 Do family serine endopeptidase compare
ABIE40_RS29185 -2.1 -2.3 hypothetical protein compare
ABIE40_RS26055 -2.1 -3.2 type II toxin-antitoxin system VapC family toxin compare
ABIE40_RS19365 -2.1 -2.8 double-strand break repair protein AddB compare
ABIE40_RS10345 -2.1 -5.5 RNA polymerase-binding protein DksA compare
ABIE40_RS27255 -2.1 -1.1 hypothetical protein compare
ABIE40_RS17585 -2.1 -1.4 DUF2125 domain-containing protein compare
ABIE40_RS21025 -2.1 -4.7 VOC family protein compare
ABIE40_RS07480 -2.0 -5.2 DUF2155 domain-containing protein compare
ABIE40_RS14850 -2.0 -6.3 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE40_RS04770 -2.0 -5.0 TetR/AcrR family transcriptional regulator compare
ABIE40_RS11740 -2.0 -7.6 SCO family protein compare
ABIE40_RS19805 -2.0 -1.4 hypothetical protein compare
ABIE40_RS09540 -2.0 -4.7 peptidylprolyl isomerase compare
ABIE40_RS18285 -2.0 -6.7 heme exporter protein CcmB compare
ABIE40_RS19360 -2.0 -3.0 double-strand break repair helicase AddA compare
ABIE40_RS10100 -2.0 -3.7 branched-chain amino acid ABC transporter substrate-binding protein compare
ABIE40_RS27520 -2.0 -0.9 hypothetical protein compare
ABIE40_RS10430 -2.0 -7.3 MlaE family lipid ABC transporter permease subunit compare
ABIE40_RS29930 -2.0 -3.5 hypothetical protein compare
ABIE40_RS17570 -1.9 -5.5 YdcF family protein compare
ABIE40_RS27335 -1.9 -1.4 hypothetical protein compare
ABIE40_RS30720 -1.9 -0.8 hypothetical protein compare
ABIE40_RS10420 -1.9 -6.3 MCE family protein compare
ABIE40_RS06375 -1.9 -7.5 endolytic transglycosylase MltG compare
ABIE40_RS10280 -1.9 -2.7 hypothetical protein compare
ABIE40_RS20440 -1.8 -1.5 cobalt-precorrin-6A reductase compare
ABIE40_RS12425 -1.8 -4.3 hypothetical protein compare
ABIE40_RS01705 -1.8 -4.9 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
ABIE40_RS30865 -1.8 -1.3 CheR family methyltransferase compare
ABIE40_RS12985 -1.8 -5.4 ATP-binding protein compare
ABIE40_RS14785 -1.8 -2.9 hypothetical protein compare
ABIE40_RS20465 -1.8 -3.5 precorrin-6A synthase (deacetylating) compare
ABIE40_RS07475 -1.8 -1.9 NADH:ubiquinone oxidoreductase subunit NDUFA12 compare
ABIE40_RS00155 -1.8 -6.4 ribonuclease D compare
ABIE40_RS11105 -1.8 -4.9 cobyrinate a,c-diamide synthase compare
ABIE40_RS09810 -1.8 -1.9 peptide deformylase compare
ABIE40_RS27395 -1.8 -0.5 hypothetical protein compare
ABIE40_RS19470 -1.7 -1.2 GNAT family N-acetyltransferase compare
ABIE40_RS10415 -1.7 -5.3 ABC-type transport auxiliary lipoprotein family protein compare
ABIE40_RS03190 -1.7 -3.5 phosphogluconate dehydratase compare
ABIE40_RS19615 -1.7 -0.7 DUF1109 domain-containing protein compare
ABIE40_RS00620 -1.7 -6.7 microcin C ABC transporter permease YejB compare
ABIE40_RS30200 -1.7 -1.4 hypothetical protein compare
ABIE40_RS11175 -1.7 -3.3 cobyric acid synthase compare
ABIE40_RS02075 -1.7 -7.5 ROK family transcriptional regulator compare
ABIE40_RS30890 -1.7 -1.6 hypothetical protein compare
ABIE40_RS13125 -1.7 -8.6 cytochrome b N-terminal domain-containing protein compare
ABIE40_RS12845 -1.6 -2.7 glycosyltransferase family 4 protein compare
ABIE40_RS08640 -1.6 -1.0 hypothetical protein compare
ABIE40_RS18555 -1.6 -3.2 EF-P lysine aminoacylase EpmA compare
ABIE40_RS03840 -1.6 -7.1 aromatic ring-hydroxylating dioxygenase subunit alpha compare
ABIE40_RS24875 -1.6 -5.5 bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase compare
ABIE40_RS20445 -1.6 -0.9 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS17645 -1.6 -3.2 cobaltochelatase subunit CobT compare
ABIE40_RS04160 -1.6 -2.8 type II toxin-antitoxin system ParD family antitoxin compare
ABIE40_RS11095 -1.6 -4.0 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS08970 -1.6 -6.9 citrate synthase compare
ABIE40_RS14135 -1.6 -2.6 TetR/AcrR family transcriptional regulator compare
ABIE40_RS09095 -1.6 -1.8 PAS domain-containing sensor histidine kinase compare
ABIE40_RS24870 -1.6 -2.1 DeoR/GlpR family DNA-binding transcription regulator compare
ABIE40_RS27680 -1.6 -1.2 hypothetical protein compare
ABIE40_RS06270 -1.6 -4.1 amidophosphoribosyltransferase compare
ABIE40_RS04050 -1.5 -8.5 metalloprotease TldD compare
ABIE40_RS08140 -1.5 -7.7 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS09135 -1.5 -2.7 nucleoside deaminase compare
ABIE40_RS11155 -1.5 -5.6 cobaltochelatase subunit CobN compare
ABIE40_RS17575 -1.5 -5.1 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
ABIE40_RS04845 -1.5 -9.8 S9 family peptidase compare
ABIE40_RS18280 -1.5 -3.8 heme ABC exporter ATP-binding protein CcmA compare
ABIE40_RS18975 -1.5 -7.0 S41 family peptidase compare
ABIE40_RS16175 -1.5 -3.7 sigma-54 dependent transcriptional regulator compare
ABIE40_RS12860 -1.5 -0.8 Lrp/AsnC family transcriptional regulator compare
ABIE40_RS20435 -1.5 -1.7 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS00625 -1.5 -5.4 ABC transporter permease compare
ABIE40_RS07045 -1.5 -1.4 MarR family winged helix-turn-helix transcriptional regulator compare
ABIE40_RS11075 -1.5 -3.1 beta-ketoacyl-ACP synthase compare
ABIE40_RS20455 -1.5 -1.1 precorrin-8X methylmutase compare
ABIE40_RS07200 -1.5 -1.8 NADH-quinone oxidoreductase subunit E compare
ABIE40_RS16180 -1.5 -9.5 M3 family oligoendopeptidase compare
ABIE40_RS19465 -1.5 -2.2 ATP-dependent protease subunit HslV compare
ABIE40_RS19265 -1.5 -2.0 protein-export chaperone SecB compare
ABIE40_RS23940 -1.5 -4.9 TetR/AcrR family transcriptional regulator compare
ABIE40_RS29950 -1.5 -1.7 hypothetical protein compare
ABIE40_RS11645 -1.5 -4.6 OmpA family protein compare
ABIE40_RS30235 -1.5 -3.7 cupin compare
ABIE40_RS19395 -1.4 -1.8 PTS sugar transporter subunit IIA compare
ABIE40_RS29715 -1.4 -1.6 hypothetical protein compare
ABIE40_RS29225 -1.4 -1.8 hypothetical protein compare
ABIE40_RS02305 -1.4 -4.2 phosphate signaling complex protein PhoU compare
ABIE40_RS04185 -1.4 -3.6 YqgE/AlgH family protein compare
ABIE40_RS08575 -1.4 -2.0 DUF1127 domain-containing protein compare
ABIE40_RS23670 -1.4 -1.0 hypothetical protein compare
ABIE40_RS22960 -1.4 -2.1 Lrp/AsnC family transcriptional regulator compare
ABIE40_RS29155 -1.4 -0.8 transport-associated protein compare
ABIE40_RS11150 -1.4 -4.8 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS15745 -1.4 -3.6 Holliday junction branch migration protein RuvA compare
ABIE40_RS05025 -1.4 -4.5 MucR family transcriptional regulator compare
ABIE40_RS26875 -1.4 -2.0 ferritin-like domain-containing protein compare
ABIE40_RS19100 -1.4 -7.0 lytic transglycosylase domain-containing protein compare
ABIE40_RS10725 -1.4 -2.4 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS06275 -1.4 -3.9 CvpA family protein compare
ABIE40_RS13670 -1.4 -2.3 type II toxin-antitoxin system prevent-host-death family antitoxin compare
ABIE40_RS08935 -1.4 -0.9 RIP metalloprotease RseP compare
ABIE40_RS11900 -1.4 -1.9 N-acetylmuramoyl-L-alanine amidase compare
ABIE40_RS16070 -1.4 -2.4 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS04085 -1.4 -5.3 cytochrome c oxidase subunit 3 compare
ABIE40_RS26395 -1.4 -0.6 hypothetical protein compare
ABIE40_RS14245 -1.4 -2.5 hypothetical protein compare
ABIE40_RS11720 -1.4 -7.8 aminopeptidase P family protein compare
ABIE40_RS25740 -1.4 -4.3 FadR/GntR family transcriptional regulator compare
ABIE40_RS03730 -1.4 -1.8 RES family NAD+ phosphorylase compare
ABIE40_RS15550 -1.4 -5.2 heavy metal translocating P-type ATPase compare
ABIE40_RS29585 -1.3 -2.8 GlxA family transcriptional regulator compare
ABIE40_RS03735 -1.3 -1.9 antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein compare
ABIE40_RS20430 -1.3 -1.6 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS00870 -1.3 -6.1 type II and III secretion system protein family protein compare
ABIE40_RS08005 -1.3 -1.3 dihydroxy-acid dehydratase compare
ABIE40_RS03745 -1.3 -3.8 hypothetical protein compare
ABIE40_RS06775 -1.3 -1.8 DUF177 domain-containing protein compare
ABIE40_RS04060 -1.3 -5.6 cytochrome c oxidase subunit II compare
ABIE40_RS19260 -1.3 -1.5 DNA polymerase III subunit epsilon compare
ABIE40_RS04065 -1.3 -7.7 cytochrome c oxidase subunit I compare
ABIE40_RS30535 -1.3 -0.7 hypothetical protein compare
ABIE40_RS12135 -1.3 -3.0 methionine synthase compare
ABIE40_RS24730 -1.3 -4.5 glycerol-3-phosphate dehydrogenase compare
ABIE40_RS11605 -1.3 -2.8 AsmA-like C-terminal region-containing protein compare
ABIE40_RS11530 -1.3 -4.5 protease modulator HflC compare
ABIE40_RS08500 -1.3 -0.9 preprotein translocase subunit YajC compare
ABIE40_RS24355 -1.3 -3.8 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS26910 -1.3 -2.2 SemiSWEET transporter compare
ABIE40_RS08980 -1.3 -3.1 transcriptional repressor LexA compare
ABIE40_RS18695 -1.3 -4.9 polyhydroxyalkanoate synthesis repressor PhaR compare
ABIE40_RS06160 -1.3 -3.2 TIGR02301 family protein compare
ABIE40_RS01055 -1.3 -4.1 translation elongation factor 4 compare
ABIE40_RS05155 -1.3 -0.9 DUF5330 domain-containing protein compare
ABIE40_RS27530 -1.3 -1.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Rhizobium sp. OAE497 in stress experiments

For stress 3-octanone across organisms