Experiment set3S129 for Rhizobium sp. OAE497

Compare to:

R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM

200 most important genes:

  gene name fitness t score description  
ABIE40_RS18280 -6.1 -4.7 heme ABC exporter ATP-binding protein CcmA compare
ABIE40_RS19705 -5.8 -7.0 polysaccharide deacetylase family protein compare
ABIE40_RS19710 -5.3 -11.3 glycosyltransferase family 4 protein compare
ABIE40_RS19780 -5.2 -8.0 glycosyltransferase family 4 protein compare
ABIE40_RS06265 -5.0 -2.5 SDR family NAD(P)-dependent oxidoreductase compare
ABIE40_RS18285 -4.9 -5.9 heme exporter protein CcmB compare
ABIE40_RS21025 -4.9 -5.8 VOC family protein compare
ABIE40_RS00235 -4.8 -5.7 cytochrome c family protein compare
ABIE40_RS19745 -4.8 -6.5 nucleotide sugar dehydrogenase compare
ABIE40_RS05690 -4.7 -4.6 cytochrome c-type biogenesis protein compare
ABIE40_RS09930 -4.6 -3.2 copper chaperone PCu(A)C compare
ABIE40_RS02855 -4.6 -20.3 glycosyltransferase family 39 protein compare
ABIE40_RS19775 -4.6 -13.6 glycosyltransferase family protein compare
ABIE40_RS19785 -4.5 -6.8 glycosyltransferase compare
ABIE40_RS05685 -4.5 -6.1 heme lyase CcmF/NrfE family subunit compare
ABIE40_RS19120 -4.4 -26.6 NAD-glutamate dehydrogenase compare
ABIE40_RS18300 -4.3 -8.2 DsbE family thiol:disulfide interchange protein compare
ABIE40_RS04065 -4.3 -11.1 cytochrome c oxidase subunit I compare
ABIE40_RS14850 -4.3 -2.9 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE40_RS05680 -4.3 -5.1 cytochrome c maturation protein CcmE compare
ABIE40_RS13125 -4.2 -10.1 cytochrome b N-terminal domain-containing protein compare
ABIE40_RS11740 -4.1 -8.8 SCO family protein compare
ABIE40_RS04060 -4.1 -9.6 cytochrome c oxidase subunit II compare
ABIE40_RS18290 -4.0 -8.6 heme ABC transporter permease compare
ABIE40_RS04080 -4.0 -10.8 cytochrome c oxidase assembly protein compare
ABIE40_RS01015 -3.9 -3.4 NrsF family protein compare
ABIE40_RS13130 -3.8 -7.7 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABIE40_RS18720 -3.8 -2.4 polyprenyl synthetase family protein compare
ABIE40_RS05870 -3.8 -10.6 glycosyltransferase family 2 protein compare
ABIE40_RS06915 -3.8 -12.7 COX15/CtaA family protein compare
ABIE40_RS10720 -3.7 -2.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS00950 -3.7 -1.1 hypothetical protein compare
ABIE40_RS19480 -3.7 -2.5 DUF1402 family protein compare
ABIE40_RS09545 -3.6 -2.0 anthranilate phosphoribosyltransferase compare
ABIE40_RS17565 -3.6 -1.8 ABC transporter permease compare
ABIE40_RS04085 -3.5 -8.5 cytochrome c oxidase subunit 3 compare
ABIE40_RS28600 -3.5 -1.0 FAD-dependent oxidoreductase compare
ABIE40_RS13120 -3.5 -8.1 cytochrome c1 compare
ABIE40_RS09170 -3.4 -2.4 cytochrome c biogenesis CcdA family protein compare
ABIE40_RS05025 -3.4 -6.4 MucR family transcriptional regulator compare
ABIE40_RS07105 -3.3 -2.6 DNA-binding protein HupB compare
ABIE40_RS19790 -3.3 -15.9 ABC transporter transmembrane domain-containing protein compare
ABIE40_RS04070 -3.3 -5.1 heme o synthase compare
ABIE40_RS19100 -3.3 -11.1 lytic transglycosylase domain-containing protein compare
ABIE40_RS17515 -3.3 -5.5 TlpA disulfide reductase family protein compare
ABIE40_RS04505 -3.3 -0.9 YlcI/YnfO family protein compare
ABIE40_RS10425 -3.3 -5.8 ABC transporter ATP-binding protein compare
ABIE40_RS21840 -3.3 -1.6 lysophospholipid acyltransferase family protein compare
ABIE40_RS03840 -3.3 -9.1 aromatic ring-hydroxylating dioxygenase subunit alpha compare
ABIE40_RS08970 -3.1 -13.1 citrate synthase compare
ABIE40_RS15650 -3.1 -4.2 TIGR00282 family metallophosphoesterase compare
ABIE40_RS04770 -3.1 -3.6 TetR/AcrR family transcriptional regulator compare
ABIE40_RS13370 -3.1 -10.2 CDF family cation efflux transporter EmfA compare
ABIE40_RS20315 -3.0 -0.9 type II toxin-antitoxin system VapB family antitoxin compare
ABIE40_RS07480 -3.0 -6.7 DUF2155 domain-containing protein compare
ABIE40_RS17290 -2.9 -5.9 peptide chain release factor N(5)-glutamine methyltransferase compare
ABIE40_RS03745 -2.9 -6.6 hypothetical protein compare
ABIE40_RS22300 -2.9 -2.0 superoxide dismutase compare
ABIE40_RS19805 -2.9 -2.1 hypothetical protein compare
ABIE40_RS23670 -2.8 -1.4 hypothetical protein compare
ABIE40_RS09660 -2.8 -10.5 AI-2E family transporter compare
ABIE40_RS17570 -2.8 -6.1 YdcF family protein compare
ABIE40_RS10420 -2.7 -6.7 MCE family protein compare
ABIE40_RS03515 -2.7 -4.5 glutamate--cysteine ligase compare
ABIE40_RS02075 -2.7 -11.8 ROK family transcriptional regulator compare
ABIE40_RS19700 -2.6 -2.5 MBL fold metallo-hydrolase compare
ABIE40_RS13410 -2.6 -3.1 anthranilate synthase compare
ABIE40_RS19330 -2.6 -3.1 phosphoribosylanthranilate isomerase compare
ABIE40_RS27470 -2.6 -1.5 hypothetical protein compare
ABIE40_RS01930 -2.6 -1.3 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS02345 -2.6 -1.8 2'-deoxycytidine 5'-triphosphate deaminase compare
ABIE40_RS10100 -2.6 -4.6 branched-chain amino acid ABC transporter substrate-binding protein compare
ABIE40_RS12115 -2.6 -1.2 GntR family transcriptional regulator compare
ABIE40_RS17645 -2.6 -2.5 cobaltochelatase subunit CobT compare
ABIE40_RS00410 -2.5 -2.4 hypothetical protein compare
ABIE40_RS12845 -2.5 -3.6 glycosyltransferase family 4 protein compare
ABIE40_RS10430 -2.5 -9.8 MlaE family lipid ABC transporter permease subunit compare
ABIE40_RS17525 -2.5 -1.6 lipoprotein compare
ABIE40_RS05385 -2.5 -1.7 Nramp family divalent metal transporter compare
ABIE40_RS00595 -2.4 -3.7 glucokinase compare
ABIE40_RS18615 -2.4 -1.2 MarR family transcriptional regulator compare
ABIE40_RS15010 -2.4 -10.9 metallophosphoesterase compare
ABIE40_RS20440 -2.4 -1.9 cobalt-precorrin-6A reductase compare
ABIE40_RS14750 -2.4 -3.2 flagellar export protein FliJ compare
ABIE40_RS27210 -2.4 -1.6 HupE/UreJ family protein compare
ABIE40_RS10755 -2.4 -1.6 hypothetical protein compare
ABIE40_RS10725 -2.4 -3.2 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS12360 -2.4 -8.3 DUF5131 family protein compare
ABIE40_RS19395 -2.3 -2.1 PTS sugar transporter subunit IIA compare
ABIE40_RS15855 -2.3 -2.0 cell division protein ZapA compare
ABIE40_RS27405 -2.3 -1.6 hypothetical protein compare
ABIE40_RS24355 -2.3 -5.3 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS30355 -2.3 -2.3 response regulator compare
ABIE40_RS11920 -2.3 -6.4 lytic transglycosylase domain-containing protein compare
ABIE40_RS07045 -2.3 -2.1 MarR family winged helix-turn-helix transcriptional regulator compare
ABIE40_RS29225 -2.3 -2.5 hypothetical protein compare
ABIE40_RS12985 -2.3 -5.8 ATP-binding protein compare
ABIE40_RS09095 -2.3 -1.6 PAS domain-containing sensor histidine kinase compare
ABIE40_RS14980 -2.3 -4.8 glycoside hydrolase family 16 protein compare
ABIE40_RS19465 -2.3 -1.5 ATP-dependent protease subunit HslV compare
ABIE40_RS04100 -2.3 -7.8 SURF1 family protein compare
ABIE40_RS18555 -2.3 -1.6 EF-P lysine aminoacylase EpmA compare
ABIE40_RS24875 -2.2 -7.0 bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase compare
ABIE40_RS11065 -2.2 -1.5 zinc-binding dehydrogenase compare
ABIE40_RS00920 -2.2 -6.7 NlpC/P60 family protein compare
ABIE40_RS09540 -2.2 -4.9 peptidylprolyl isomerase compare
ABIE40_RS17560 -2.2 -2.6 cell division ATP-binding protein FtsE compare
ABIE40_RS05365 -2.2 -5.8 tetratricopeptide repeat protein compare
ABIE40_RS17695 -2.2 -11.2 murein L,D-transpeptidase family protein compare
ABIE40_RS10155 -2.2 -1.7 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS05430 -2.2 -2.6 phosphoribosylamine--glycine ligase compare
ABIE40_RS16660 -2.2 -3.5 GTP-binding protein compare
ABIE40_RS23250 -2.2 -7.9 hypothetical protein compare
ABIE40_RS17650 -2.2 -2.9 cobaltochelatase subunit CobS compare
ABIE40_RS11995 -2.2 -1.2 TIGR01244 family sulfur transferase compare
ABIE40_RS05695 -2.1 -1.4 Do family serine endopeptidase compare
ABIE40_RS07270 -2.1 -5.2 DUF1467 family protein compare
ABIE40_RS15760 -2.1 -4.5 Holliday junction branch migration DNA helicase RuvB compare
ABIE40_RS20655 -2.1 -3.7 substrate-binding domain-containing protein compare
ABIE40_RS11645 -2.1 -6.1 OmpA family protein compare
ABIE40_RS28365 -2.1 -2.3 DUF982 domain-containing protein compare
ABIE40_RS08425 -2.1 -3.4 iron-sulfur cluster insertion protein ErpA compare
ABIE40_RS00725 -2.1 -2.0 DNA cytosine methyltransferase compare
ABIE40_RS10390 -2.1 -1.3 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE40_RS10180 -2.1 -2.8 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS06375 -2.1 -7.6 endolytic transglycosylase MltG compare
ABIE40_RS20445 -2.1 -1.1 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS12580 -2.0 -2.8 hypothetical protein compare
ABIE40_RS20435 -2.0 -1.9 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS15950 -2.0 -3.1 peptidoglycan -binding protein compare
ABIE40_RS17165 -2.0 -6.2 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS10935 -2.0 -1.9 Fur family transcriptional regulator compare
ABIE40_RS04235 -2.0 -7.5 hypothetical protein compare
ABIE40_RS22440 -2.0 -2.6 GntR family transcriptional regulator compare
ABIE40_RS16180 -2.0 -12.6 M3 family oligoendopeptidase compare
ABIE40_RS04075 -2.0 -1.7 hypothetical protein compare
ABIE40_RS17585 -2.0 -1.3 DUF2125 domain-containing protein compare
ABIE40_RS06555 -2.0 -1.8 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS00625 -2.0 -7.7 ABC transporter permease compare
ABIE40_RS27900 -2.0 -1.1 S4 domain-containing protein compare
ABIE40_RS08365 -2.0 -2.9 hypothetical protein compare
ABIE40_RS19355 -2.0 -2.3 thioredoxin compare
ABIE40_RS18005 -1.9 -9.4 cell division protein ZapE compare
ABIE40_RS10450 -1.9 -6.3 NADP-dependent malic enzyme compare
ABIE40_RS10415 -1.9 -6.7 ABC-type transport auxiliary lipoprotein family protein compare
ABIE40_RS25875 -1.9 -2.7 hypothetical protein compare
ABIE40_RS19615 -1.9 -0.7 DUF1109 domain-containing protein compare
ABIE40_RS08500 -1.9 -1.1 preprotein translocase subunit YajC compare
ABIE40_RS10345 -1.9 -3.6 RNA polymerase-binding protein DksA compare
ABIE40_RS30740 -1.9 -3.0 hypothetical protein compare
ABIE40_RS27020 -1.9 -2.2 hypothetical protein compare
ABIE40_RS27580 -1.9 -3.0 ProQ/FINO family protein compare
ABIE40_RS04160 -1.9 -4.4 type II toxin-antitoxin system ParD family antitoxin compare
ABIE40_RS17020 -1.9 -5.9 sugar-binding transcriptional regulator compare
ABIE40_RS20370 -1.9 -1.0 type II toxin-antitoxin system Phd/YefM family antitoxin compare
ABIE40_RS11905 -1.9 -1.3 DnaJ family molecular chaperone compare
ABIE40_RS11095 -1.9 -3.8 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS05875 -1.9 -5.3 lysylphosphatidylglycerol synthase domain-containing protein compare
ABIE40_RS06390 -1.8 -5.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA compare
ABIE40_RS02305 -1.8 -5.1 phosphate signaling complex protein PhoU compare
ABIE40_RS11900 -1.8 -1.3 N-acetylmuramoyl-L-alanine amidase compare
ABIE40_RS15730 -1.8 -2.1 crossover junction endodeoxyribonuclease RuvC compare
ABIE40_RS20430 -1.8 -2.8 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS05675 -1.8 -6.1 c-type cytochrome biogenesis protein CcmI compare
ABIE40_RS27500 -1.8 -1.7 PPC domain-containing DNA-binding protein compare
ABIE40_RS02390 -1.8 -1.9 tellurite resistance TerB family protein compare
ABIE40_RS07200 -1.8 -2.0 NADH-quinone oxidoreductase subunit E compare
ABIE40_RS11945 -1.8 -6.5 lytic murein transglycosylase compare
ABIE40_RS18570 -1.8 -7.1 N-acetylglucosamine-6-phosphate deacetylase compare
ABIE40_RS00155 -1.8 -7.1 ribonuclease D compare
ABIE40_RS12445 -1.8 -2.0 metallophosphoesterase compare
ABIE40_RS23940 -1.8 -5.5 TetR/AcrR family transcriptional regulator compare
ABIE40_RS11605 -1.8 -2.9 AsmA-like C-terminal region-containing protein compare
ABIE40_RS18975 -1.7 -7.2 S41 family peptidase compare
ABIE40_RS21750 -1.7 -1.2 hypothetical protein compare
ABIE40_RS05715 -1.7 -4.6 PAS domain-containing sensor histidine kinase compare
ABIE40_RS30720 -1.7 -0.7 hypothetical protein compare
ABIE40_RS08575 -1.7 -2.0 DUF1127 domain-containing protein compare
ABIE40_RS03780 -1.7 -7.1 TldD/PmbA family protein compare
ABIE40_RS28495 -1.7 -2.6 DUF4336 domain-containing protein compare
ABIE40_RS09795 -1.7 -7.8 heparan-alpha-glucosaminide N-acetyltransferase compare
ABIE40_RS11075 -1.7 -3.0 beta-ketoacyl-ACP synthase compare
ABIE40_RS27335 -1.7 -1.0 hypothetical protein compare
ABIE40_RS14785 -1.7 -2.9 hypothetical protein compare
ABIE40_RS02720 -1.7 -2.1 DUF2948 family protein compare
ABIE40_RS01055 -1.7 -4.9 translation elongation factor 4 compare
ABIE40_RS01705 -1.7 -5.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
ABIE40_RS11105 -1.7 -4.7 cobyrinate a,c-diamide synthase compare
ABIE40_RS00620 -1.7 -6.5 microcin C ABC transporter permease YejB compare
ABIE40_RS28320 -1.7 -1.5 divalent metal cation transporter compare
ABIE40_RS28215 -1.7 -2.7 TetR/AcrR family transcriptional regulator compare
ABIE40_RS16070 -1.6 -2.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS21985 -1.6 -2.7 MarR family transcriptional regulator compare
ABIE40_RS22725 -1.6 -6.4 anti-sigma factor compare
ABIE40_RS11535 -1.6 -4.7 FtsH protease activity modulator HflK compare
ABIE40_RS03815 -1.6 -1.1 DUF6101 family protein compare
ABIE40_RS01640 -1.6 -3.3 ribonuclease PH compare
ABIE40_RS02585 -1.6 -7.4 acetyl-CoA C-acetyltransferase compare
ABIE40_RS00630 -1.6 -6.5 ABC transporter ATP-binding protein compare
ABIE40_RS21620 -1.6 -3.9 FadR/GntR family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Rhizobium sp. OAE497 in stress experiments

For stress 6-Pentyl-2H-pyran-2-one across organisms