Experiment set3S118 for Rhizobium sp. OAE497

Compare to:

DMSO control

200 most detrimental genes:

  gene name fitness t score description  
ABIE40_RS27395 +1.7 1.3 hypothetical protein compare
ABIE40_RS29240 +1.4 2.9 cold-shock protein compare
ABIE40_RS27250 +1.3 1.3 hypothetical protein compare
ABIE40_RS29670 +1.2 2.2 AraC family transcriptional regulator compare
ABIE40_RS30285 +1.2 1.4 co-chaperone GroES compare
ABIE40_RS17525 +1.2 1.5 lipoprotein compare
ABIE40_RS10485 +1.2 2.5 DUF1003 domain-containing protein compare
ABIE40_RS29110 +1.1 1.5 GFA family protein compare
ABIE40_RS30495 +1.0 1.0 LuxR C-terminal-related transcriptional regulator compare
ABIE40_RS30655 +1.0 1.3 hypothetical protein compare
ABIE40_RS26410 +0.9 0.8 plasmid stabilization protein compare
ABIE40_RS27465 +0.9 2.3 hypothetical protein compare
ABIE40_RS28385 +0.9 1.6 MgtC/SapB family protein compare
ABIE40_RS17060 +0.9 1.7 OsmC family protein compare
ABIE40_RS30305 +0.8 3.0 hypothetical protein compare
ABIE40_RS08330 +0.8 2.1 hypothetical protein compare
ABIE40_RS14380 +0.8 1.5 sugar phosphate isomerase/epimerase compare
ABIE40_RS28045 +0.8 0.9 hypothetical protein compare
ABIE40_RS26045 +0.8 1.9 hypothetical protein compare
ABIE40_RS27630 +0.8 1.4 metalloregulator ArsR/SmtB family transcription factor compare
ABIE40_RS19460 +0.8 5.0 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS01730 +0.8 1.3 NifU family protein compare
ABIE40_RS27160 +0.8 0.7 low affinity iron permease family protein compare
ABIE40_RS07740 +0.8 1.7 elongation factor Tu compare
ABIE40_RS25470 +0.7 2.3 ABC transporter permease compare
ABIE40_RS14635 +0.7 0.5 urease subunit gamma compare
ABIE40_RS15105 +0.7 1.2 PfkB family carbohydrate kinase compare
ABIE40_RS01415 +0.7 1.6 cysteine synthase A compare
ABIE40_RS10280 +0.7 2.1 hypothetical protein compare
ABIE40_RS27835 +0.7 1.9 lipocalin family protein compare
ABIE40_RS14220 +0.7 1.2 efflux transporter outer membrane subunit compare
ABIE40_RS29420 +0.7 1.2 hypothetical protein compare
ABIE40_RS13635 +0.6 5.6 peptide antibiotic transporter SbmA compare
ABIE40_RS00230 +0.6 1.9 AEC family transporter compare
ABIE40_RS27725 +0.6 1.1 DUF1236 domain-containing protein compare
ABIE40_RS26850 +0.6 1.3 hypothetical protein compare
ABIE40_RS04975 +0.6 1.3 AAA family ATPase compare
ABIE40_RS08695 +0.6 2.1 hypothetical protein compare
ABIE40_RS02770 +0.6 1.3 OsmC family protein compare
ABIE40_RS01690 +0.6 3.5 hemolysin family protein compare
ABIE40_RS14885 +0.6 3.7 alpha/beta hydrolase fold domain-containing protein compare
ABIE40_RS05895 +0.6 1.2 YciI family protein compare
ABIE40_RS05625 +0.6 0.8 phage tail tape measure protein compare
ABIE40_RS28930 +0.6 2.0 cysteine hydrolase compare
ABIE40_RS30790 +0.6 2.7 manganese catalase family protein compare
ABIE40_RS13735 +0.6 1.9 3-hydroxybutyrate dehydrogenase compare
ABIE40_RS26865 +0.6 1.4 hypothetical protein compare
ABIE40_RS30620 +0.6 1.4 phage holin family protein compare
ABIE40_RS29075 +0.6 2.7 LysR family transcriptional regulator compare
ABIE40_RS29105 +0.6 1.5 DUF2188 domain-containing protein compare
ABIE40_RS26855 +0.6 0.7 hypothetical protein compare
ABIE40_RS28580 +0.6 2.2 c-type cytochrome compare
ABIE40_RS24130 +0.6 1.6 ABC transporter permease compare
ABIE40_RS17890 +0.6 1.9 redox-sensitive transcriptional activator SoxR compare
ABIE40_RS28485 +0.6 0.9 hypothetical protein compare
ABIE40_RS14335 +0.6 2.2 hypothetical protein compare
ABIE40_RS00825 +0.6 1.0 uracil phosphoribosyltransferase compare
ABIE40_RS30575 +0.6 1.4 hypothetical protein compare
ABIE40_RS28020 +0.6 2.7 hypothetical protein compare
ABIE40_RS06770 +0.6 1.7 ubiquinol-cytochrome C chaperone family protein compare
ABIE40_RS29945 +0.6 1.1 hypothetical protein compare
ABIE40_RS09600 +0.6 2.1 FecR family protein compare
ABIE40_RS26945 +0.6 3.0 plasmid partitioning protein RepA compare
ABIE40_RS06730 +0.6 2.2 riboflavin synthase compare
ABIE40_RS06645 +0.6 1.0 hypothetical protein compare
ABIE40_RS30225 +0.6 1.6 hypothetical protein compare
ABIE40_RS15940 +0.6 1.1 YegP family protein compare
ABIE40_RS10785 +0.6 1.7 acyl-CoA thioesterase compare
ABIE40_RS28035 +0.6 1.2 hypothetical protein compare
ABIE40_RS22755 +0.6 0.7 exopolysaccharide biosynthesis protein compare
ABIE40_RS09885 +0.6 2.6 quaternary ammonium compound efflux SMR transporter SugE compare
ABIE40_RS12955 +0.5 2.0 cold-shock protein compare
ABIE40_RS30220 +0.5 0.5 hypothetical protein compare
ABIE40_RS03625 +0.5 2.6 DUF305 domain-containing protein compare
ABIE40_RS28785 +0.5 0.6 ABC-three component system middle component 1 compare
ABIE40_RS18440 +0.5 1.0 Trm112 family protein compare
ABIE40_RS19090 +0.5 2.3 hypothetical protein compare
ABIE40_RS23225 +0.5 2.9 tripartite tricarboxylate transporter TctB family protein compare
ABIE40_RS29540 +0.5 2.0 hypothetical protein compare
ABIE40_RS30570 +0.5 3.1 Hsp20 family protein compare
ABIE40_RS27520 +0.5 0.4 hypothetical protein compare
ABIE40_RS14395 +0.5 0.9 hypothetical protein compare
ABIE40_RS23905 +0.5 2.7 transporter substrate-binding domain-containing protein compare
ABIE40_RS29475 +0.5 1.5 hypothetical protein compare
ABIE40_RS30020 +0.5 2.1 GntR family transcriptional regulator compare
ABIE40_RS23200 +0.5 2.2 chromate transporter compare
ABIE40_RS05800 +0.5 1.3 Lrp/AsnC family transcriptional regulator compare
ABIE40_RS19245 +0.5 2.7 Maf-like protein compare
ABIE40_RS25925 +0.5 1.5 thiamine phosphate synthase compare
ABIE40_RS03460 +0.5 1.6 SAM-dependent methyltransferase compare
ABIE40_RS18965 +0.5 2.8 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
ABIE40_RS24445 +0.5 2.2 VOC family protein compare
ABIE40_RS14165 +0.5 1.8 hypothetical protein compare
ABIE40_RS27870 +0.5 1.7 hypothetical protein compare
ABIE40_RS10925 +0.5 1.3 gamma carbonic anhydrase family protein compare
ABIE40_RS27925 +0.5 1.3 4-oxalocrotonate tautomerase family protein compare
ABIE40_RS14075 +0.5 1.4 hypothetical protein compare
ABIE40_RS20510 +0.5 2.1 TerC family protein compare
ABIE40_RS20635 +0.5 1.2 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
ABIE40_RS08775 +0.5 1.4 tRNA-Thr compare
ABIE40_RS20895 +0.5 2.8 PLP-dependent aminotransferase family protein compare
ABIE40_RS26610 +0.5 1.4 hypothetical protein compare
ABIE40_RS16050 +0.5 1.5 metalloregulator ArsR/SmtB family transcription factor compare
ABIE40_RS30845 +0.5 1.5 c-type cytochrome compare
ABIE40_RS17340 +0.5 1.3 DUF1178 family protein compare
ABIE40_RS09555 +0.5 1.9 cyclic pyranopterin monophosphate synthase MoaC compare
ABIE40_RS30135 +0.5 2.0 hypothetical protein compare
ABIE40_RS19610 +0.5 2.2 sigma-70 family RNA polymerase sigma factor compare
ABIE40_RS15815 +0.5 1.9 hypothetical protein compare
ABIE40_RS19220 +0.5 2.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABIE40_RS19745 +0.5 2.9 nucleotide sugar dehydrogenase compare
ABIE40_RS27415 +0.5 1.3 sigma-70 family RNA polymerase sigma factor compare
ABIE40_RS08325 +0.5 1.4 hypothetical protein compare
ABIE40_RS04325 +0.5 1.6 hypothetical protein compare
ABIE40_RS23495 +0.5 1.5 oxidoreductase compare
ABIE40_RS15620 +0.5 1.4 tol-pal system-associated acyl-CoA thioesterase compare
ABIE40_RS21285 +0.5 2.5 ABC transporter permease compare
ABIE40_RS30015 +0.5 1.9 ABC transporter ATP-binding protein compare
ABIE40_RS21715 +0.5 2.3 ABC transporter ATP-binding protein compare
ABIE40_RS19285 +0.5 2.6 Smr/MutS family protein compare
ABIE40_RS20560 +0.5 1.3 SDR family oxidoreductase compare
ABIE40_RS08780 +0.5 2.7 hypothetical protein compare
ABIE40_RS09685 +0.5 0.7 nitroreductase compare
ABIE40_RS19925 +0.5 1.4 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS29690 +0.5 1.0 intradiol ring-cleavage dioxygenase compare
ABIE40_RS29210 +0.5 2.0 class I SAM-dependent methyltransferase compare
ABIE40_RS13645 +0.5 2.8 PadR family transcriptional regulator compare
ABIE40_RS14445 +0.5 1.9 hypothetical protein compare
ABIE40_RS28590 +0.5 0.9 low affinity iron permease family protein compare
ABIE40_RS26680 +0.5 1.6 general stress protein compare
ABIE40_RS13315 +0.5 1.8 anti-sigma factor compare
ABIE40_RS02725 +0.5 2.8 histidinol dehydrogenase compare
ABIE40_RS07455 +0.5 1.9 DUF1294 domain-containing protein compare
ABIE40_RS21785 +0.5 1.7 DUF2934 domain-containing protein compare
ABIE40_RS27290 +0.5 1.9 hypothetical protein compare
ABIE40_RS22210 +0.5 2.4 trans-aconitate 2-methyltransferase compare
ABIE40_RS20115 +0.5 0.8 substrate-binding domain-containing protein compare
ABIE40_RS28940 +0.5 1.5 hypothetical protein compare
ABIE40_RS09575 +0.5 1.2 hypothetical protein compare
ABIE40_RS20215 +0.5 1.3 glutamine cyclotransferase compare
ABIE40_RS14880 +0.5 3.2 efflux RND transporter periplasmic adaptor subunit compare
ABIE40_RS01005 +0.5 0.9 DUF2282 domain-containing protein compare
ABIE40_RS02640 +0.5 1.2 large conductance mechanosensitive channel protein MscL compare
ABIE40_RS12230 +0.5 0.6 carboxymuconolactone decarboxylase family protein compare
ABIE40_RS26005 +0.5 1.8 hypothetical protein compare
ABIE40_RS10215 +0.5 1.3 DUF982 domain-containing protein compare
ABIE40_RS17265 +0.5 2.3 hypothetical protein compare
ABIE40_RS30700 +0.5 0.8 hypothetical protein compare
ABIE40_RS16540 +0.5 1.3 response regulator transcription factor compare
ABIE40_RS24305 +0.4 2.1 response regulator compare
ABIE40_RS27600 +0.4 1.2 hypothetical protein compare
ABIE40_RS01635 +0.4 2.1 VOC family protein compare
ABIE40_RS30520 +0.4 0.7 hypothetical protein compare
ABIE40_RS30925 +0.4 1.9 hypothetical protein compare
ABIE40_RS28870 +0.4 2.1 DUF3072 domain-containing protein compare
ABIE40_RS26130 +0.4 1.8 cbb3-type cytochrome oxidase assembly protein CcoS compare
ABIE40_RS22795 +0.4 2.2 ABC transporter permease compare
ABIE40_RS29815 +0.4 1.0 hypothetical protein compare
ABIE40_RS01750 +0.4 0.9 VOC family protein compare
ABIE40_RS29915 +0.4 1.0 hypothetical protein compare
ABIE40_RS18755 +0.4 1.3 DeoR/GlpR family DNA-binding transcription regulator compare
ABIE40_RS12575 +0.4 2.1 hypothetical protein compare
ABIE40_RS30025 +0.4 1.4 TIGR04076 family protein compare
ABIE40_RS10310 +0.4 1.0 STM3941 family protein compare
ABIE40_RS19395 +0.4 0.9 PTS sugar transporter subunit IIA compare
ABIE40_RS23605 +0.4 0.6 hypothetical protein compare
ABIE40_RS13245 +0.4 0.7 CoA pyrophosphatase compare
ABIE40_RS14865 +0.4 2.7 NAD(P)-dependent oxidoreductase compare
ABIE40_RS18185 +0.4 1.5 ABC transporter ATP-binding protein compare
ABIE40_RS30400 +0.4 0.7 sulfocyanin-like copper-binding protein compare
ABIE40_RS03880 +0.4 2.1 class I SAM-dependent RNA methyltransferase compare
ABIE40_RS07715 +0.4 2.0 hypothetical protein compare
ABIE40_RS17270 +0.4 1.4 S1C family serine protease compare
ABIE40_RS28765 +0.4 0.7 chemotaxis protein CheX compare
ABIE40_RS29400 +0.4 1.6 HWE histidine kinase domain-containing protein compare
ABIE40_RS11250 +0.4 1.3 hypothetical protein compare
ABIE40_RS26390 +0.4 1.5 hypothetical protein compare
ABIE40_RS03415 +0.4 1.5 DUF1328 domain-containing protein compare
ABIE40_RS06090 +0.4 0.8 response regulator compare
ABIE40_RS30270 +0.4 1.8 NmrA family NAD(P)-binding protein compare
ABIE40_RS18680 +0.4 0.6 hypothetical protein compare
ABIE40_RS18960 +0.4 0.9 ribosome silencing factor compare
ABIE40_RS30385 +0.4 1.3 hypothetical protein compare
ABIE40_RS23575 +0.4 1.7 hypothetical protein compare
ABIE40_RS03025 +0.4 1.6 flagellin compare
ABIE40_RS17875 +0.4 2.1 SDR family oxidoreductase compare
ABIE40_RS17120 +0.4 1.4 SDR family oxidoreductase compare
ABIE40_RS17440 +0.4 1.5 hypothetical protein compare
ABIE40_RS08245 +0.4 0.9 PilZ domain-containing protein compare
ABIE40_RS16350 +0.4 1.1 hypothetical protein compare
ABIE40_RS03680 +0.4 1.7 hypothetical protein compare
ABIE40_RS14740 +0.4 2.0 paraquat-inducible protein A compare
ABIE40_RS10590 +0.4 0.9 hypothetical protein compare
ABIE40_RS15080 +0.4 2.6 FAD/NAD(P)-binding protein compare
ABIE40_RS22370 +0.4 1.8 ThuA domain-containing protein compare
ABIE40_RS05810 +0.4 1.0 iron ABC transporter permease compare
ABIE40_RS26845 +0.4 1.6 hypothetical protein compare
ABIE40_RS20870 +0.4 1.8 cytochrome o ubiquinol oxidase subunit III compare
ABIE40_RS06235 +0.4 1.5 GFA family protein compare
ABIE40_RS03320 +0.4 1.2 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Rhizobium sp. OAE497 in dmso control experiments

For dmso control Dimethyl Sulfoxide across organisms