Experiment set3IT091 for Agrobacterium fabrum C58

Compare to:

L-pyroglutamic acid nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu1750 -7.2 -6.6 phosphoribosyl c-AMP cyclohydrolase compare
Atu1620 -7.0 -12.6 triosephosphate isomerase compare
Atu0679 -6.8 -6.6 ATP phosphoribosyltransferase compare
Atu2718 -6.7 -7.9 homoserine O-succinyltransferase compare
Atu1850 -6.6 -6.0 phosphoribosylformylglycinamidine synthetase II compare
Atu0038 -6.3 -7.5 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2289 -6.2 -21.0 anthranilate synthase component I and II compare
Atu1687 -6.2 -13.5 anthranilate phosphoribosyltransferase compare
Atu0017 -6.1 -4.2 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0537 -6.1 -5.9 histidinol dehydrogenase compare
Atu2709 -6.0 -22.3 3-isopropylmalate dehydratase, large subunit compare
Atu0099 -5.9 -12.8 prephenate dehydratase compare
Atu3740 -5.8 -12.5 fructose bisphosphate aldolase compare
Atu3706 -5.8 -9.7 D-3-phosphoglycerate dehydrogenase compare
Atu2040 -5.7 -6.7 phosphoserine phosphatase compare
Atu0043 -5.6 -3.9 imidazoleglycerol-phosphate dehydratase compare
Atu1030 -5.6 -3.6 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0041 -5.5 -3.8 glutamine amidotransferase compare
Atu2264 -5.5 -17.5 2-isopropylmalate synthase compare
Atu2791 -5.4 -12.4 3-isopropylmalate dehydrogenase compare
Atu1844 -5.3 -5.3 Phosphoribosylformylglycinamidine synthetase compare
Atu1205 -5.3 -17.5 threonine dehydratase compare
Atu2650 -5.1 -14.4 glycerol-3-phosphate dehydrogenase compare
Atu3885 -5.1 -10.2 inositol monophosphatase compare
Atu2036 -5.0 -20.2 acetolactate synthase III, large subunit compare
Atu0035 -5.0 -15.4 phosphoenolpyruvate carboxykinase compare
Atu1688 -5.0 -10.6 indole-3-glycerol-phosphate synthase compare
Atu4505 -5.0 -10.3 LacI family transcriptional regulator compare
Atu0400 -4.7 -8.3 orotate phosphoribosyltransferase compare
Atu3469 -4.6 -4.5 phosphoglyceromutase compare
Atu1075 -4.6 -11.4 amidophosphoribosyltransferase compare
Atu0432 -4.6 -12.7 O-succinylhomoserine sulfhydrylase compare
Atu0678 -4.5 -7.7 histidyl-tRNA synthetase compare
Atu0399 -4.5 -10.2 dihydroorotase compare
Atu3755 -4.5 -7.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0647 -4.2 -10.3 phosphoribosylamine--glycine ligase compare
Atu1588 -4.1 -12.3 homoserine dehydrogenase compare
Atu1141 -4.1 -6.1 Phosphoribosylglycinamide synthetase compare
Atu2790 -4.1 -3.7 3-isopropylmalate dehydratase, small subunit compare
Atu3910 -4.0 -7.1 LamB/YcsF family protein compare
Atu0486 -4.0 -8.5 dihydroorotate dehydrogenase compare
Atu1140 -4.0 -4.8 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1308 -4.0 -7.4 aspartate carbamoyl transferase catalytic subunit compare
Atu3909 -3.9 -22.2 hypothetical protein compare
Atu3707 -3.9 -3.8 phosphoserine aminotransferase compare
Atu2115 -3.9 -13.6 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu1686 -3.8 -20.2 peptidyl-prolyl cis-trans isomerse D compare
Atu3754 -3.7 -5.5 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3911 -3.7 -10.7 hypothetical protein compare
Atu2015 -3.7 -16.0 aminotransferase compare
Atu3912 -3.7 -11.6 hypothetical protein compare
Atu3739 -3.6 -4.7 phosphoglycerate kinase compare
Atu0298 -3.6 -7.1 orotidine 5 compare
Atu0769 -3.6 -4.2 protoheme IX farnesyltransferase compare
Atu0039 -3.5 -4.1 imidazoleglycerol-phosphate synthase cyclase compare
Atu2522 -3.3 -18.3 agrobacterium chromosomal virulence protein B compare
Atu4018 -3.1 -12.5 two component sensor kinase compare
Atu1845 -3.1 -4.7 phosphoribosylformylglycinamidine synthase I compare
Atu3913 -3.0 -8.2 biotin carboxylase compare
Atu4019 -2.9 -11.8 two component response regulator compare
Atu0971 -2.9 -6.9 two component sensor kinase compare
Atu2728 -2.9 -7.6 beta (1-->2) glucan export ATP-binding protein compare
Atu3482 -2.9 -12.9 pantoate--beta-alanine ligase compare
Atu1307 -2.9 -10.0 dihydroorotase compare
Atu1456 -2.8 -12.4 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu0346 -2.7 -4.9 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2766 -2.6 -20.2 NAD-glutamate dehydrogenase compare
Atu1446 -2.6 -4.9 two component response regulator compare
Atu4096 -2.5 -10.2 nicotinate-nucleotide pyrophosphorylase compare
Atu3483 -2.4 -8.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu2747 -2.4 -14.1 hypothetical protein compare
Atu2548 -2.4 -16.1 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu2155 -2.4 -17.0 methionine synthase compare
Atu1589 -2.4 -7.0 aminotransferase, class I compare
Atu0031 -2.3 -2.4 PTS system, IIA component compare
Atu1455 -2.3 -4.0 hypothetical protein compare
Atu4098 -2.2 -14.9 quinolinate synthetase compare
Atu0876 -2.2 -3.1 superoxide dismutase compare
Atu2428 -2.2 -12.5 exopolysaccharide production protein PssB compare
Atu0040 -2.1 -1.4 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1748 -2.1 -10.6 NIFU-like protein compare
Atu0029 -2.0 -8.5 S-adenosylhomocysteine hydrolase compare
Atu1457 -2.0 -2.0 hypothetical protein compare
Atu0977 -2.0 -3.5 serine protease DO-like protease compare
Atu0792 -2.0 -7.2 hypothetical protein compare
Atu1454 -2.0 -8.8 siroheme synthase compare
Atu8115 -1.8 -5.4 Hypothetical Protein compare
Atu0422 -1.7 -3.1 ABC transporter, membrane spanning protein compare
Atu1685 -1.6 -1.6 hypothetical protein compare
Atu3290 -1.6 -8.5 phosphomethylpyrimidine kinase compare
Atu1462 -1.6 -10.3 glycine cleavage system protein P2 compare
Atu0141 -1.6 -2.1 cytochrome O ubiquinol oxidase subunit I compare
Atu1149 -1.5 -2.4 adenylate cyclase compare
Atu3730 -1.5 -2.1 hypothetical protein compare
Atu3731 -1.5 -7.0 5-formyltetrahydrofolate cyclo-ligase compare
Atu3997 -1.4 -10.8 biotin synthetase compare
Atu2640 -1.4 -4.1 hypothetical protein compare
Atu1359 -1.4 -1.6 dnaK deletion suppressor protein compare
Atu1463 -1.4 -4.6 glycine cleavage system component H compare
Atu0941 -1.3 -1.4 hypothetical protein compare
Atu0026 -1.3 -1.5 hypothetical protein compare
Atu3288 -1.3 -6.9 hydroxyethylthiazole kinase compare
Atu4711 -1.3 -5.0 two component sensor kinase compare
Atu1445 -1.3 -6.1 two component sensor kinase compare
Atu0641 -1.3 -4.1 hypothetical protein compare
Atu2123 -1.3 -4.1 methylenetetrahydrofolate reductase compare
Atu3289 -1.3 -2.9 thiamine-phosphate pyrophosphorylase compare
Atu2569 -1.3 -8.0 thiamine biosynthesis protein compare
Atu4317 -1.2 -3.8 TetR family transcriptional regulator compare
Atu1464 -1.2 -5.8 glycine cleavage system T protein, aminomethyltransferase compare
Atu5115 -1.2 -1.3 hypothetical protein compare
Atu0188 -1.2 -2.6 ABC transporter, membrane spanning protein (peptide) compare
Atu0912 -1.2 -1.7 Na+/H+ antiporter compare
Atu4773 -1.2 -2.4 two component response regulator compare
Atu6107 -1.2 -3.4 hypothetical protein compare
Atu4616 -1.2 -1.6 dTDP-4-dehydrorhamnose reductase compare
Atu8167 -1.2 -7.9 putative transmembrane protein compare
Atu2376 -1.2 -1.0 hypothetical protein compare
Atu3999 -1.1 -2.7 dithiobiotin synthetase compare
Atu0434 -1.1 -3.1 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0354 -1.1 -1.8 ferric uptake regulator compare
Atu0566 -1.1 -1.9 hypothetical protein compare
Atu4097 -1.1 -5.9 L-aspartate oxidase compare
Atu0142 -1.0 -4.0 cytochrome o ubiquinol oxidase subunit II compare
Atu1163 -1.0 -2.3 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu5501 -1.0 -1.4 hypothetical protein compare
Atu0421 -1.0 -1.5 ABC transporter, membrane spanning protein compare
Atu1774 -1.0 -6.0 ABC transporter, substrate binding protein (peptide) compare
Atu0251 -1.0 -6.7 hypothetical protein compare
Atu0331 -1.0 -2.7 sigma-54 modulation protein compare
Atu1039 -1.0 -4.2 DNA repair protein RecO compare
Atu1062 -1.0 -1.9 phosphatidylserine synthase compare
Atu4166 -1.0 -1.8 UDP-glucose 4-epimerase compare
Atu2800 -1.0 -3.3 precorrin-3B C17-methyltransferase compare
Atu0978 -0.9 -5.3 two component response regulator compare
Atu1364 -0.9 -4.4 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0332 -0.9 -5.5 RNA polymerase sigma-54 factor compare
Atu5148 -0.9 -2.6 hypothetical protein compare
Atu0361 -0.9 -2.1 transcriptional regulator compare
Atu3998 -0.9 -6.3 8-amino-7-oxononanoate synthase compare
Atu5142 -0.9 -0.8 hypothetical protein compare
Atu0953 -0.9 -0.8 hypothetical protein compare
Atu2127 -0.9 -5.6 L-carnitine dehydratase compare
Atu6114 -0.9 -1.0 hypothetical protein compare
Atu2125 -0.9 -1.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu3763 -0.9 -1.3 hypothetical protein compare
Atu0322 -0.9 -5.6 enoyl CoA hydratase compare
Atu8087 -0.9 -0.8 putative peptidoglycan binding protein compare
Atu0190 -0.9 -5.4 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0544 -0.8 -2.4 hypothetical protein compare
Atu4001 -0.8 -5.0 3-oxoacyl-ACP synthase compare
Atu6133 -0.8 -2.8 conserved hypothetical protein compare
Atu0723 -0.8 -1.5 FAD dependent oxidoreductase compare
Atu0030 -0.8 -1.3 phosphocarrier protein HPr compare
Atu4477 -0.8 -3.6 TetR family transcriptional regulator compare
Atu4000 -0.8 -6.1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu4217 -0.8 -2.0 TetR family transcriptional regulator compare
Atu1503 -0.8 -1.1 hypothetical protein compare
Atu1714 -0.8 -1.5 exonuclease III compare
Atu2052 -0.7 -3.4 hypothetical protein compare
Atu4502 -0.7 -3.9 cobalamin synthesis protein compare
Atu0051 -0.7 -2.9 two component sensor kinase compare
Atu1683 -0.7 -1.2 hypothetical protein compare
Atu1572 -0.7 -4.0 hydrolase compare
Atu3518 -0.7 -4.2 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu2554 -0.7 -1.5 lysyl-tRNA synthetase compare
Atu0050 -0.7 -2.7 two component response regulator compare
Atu1619 -0.7 -2.0 protein-export membrane protein SECG compare
Atu0979 -0.7 -3.9 two component sensor kinase compare
Atu2205 -0.7 -3.2 transcriptional regulator, MarR family compare
Atu1444 -0.7 -3.0 nitrogen regulation protein compare
Atu1447 -0.7 -1.5 two component sensor kinase compare
Atu2793 -0.6 -2.4 cobyrinic acid a,c-diamide synthase compare
Atu2235 -0.6 -1.7 hypothetical protein compare
Atu8029 -0.6 -1.5 hypothetical protein compare
Atu2020 -0.6 -1.3 transcriptional regulator, TetR family compare
Atu2424 -0.6 -3.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu0784 -0.6 -2.5 hypothetical protein compare
Atu5430 -0.6 -0.3 hypothetical protein compare
Atu0837 -0.6 -3.7 transcriptional regulator, MarR family compare
Atu3465 -0.6 -1.7 metallo-beta-lactamase superfamily protein compare
Atu5163 -0.6 -1.0 type IV secretion protein AvhB2 compare
Atu8151 -0.6 -1.4 hypothetical protein compare
Atu3286 -0.6 -3.2 ABC transporter permease compare
Atu0107 -0.6 -1.3 hypothetical protein compare
Atu0025 -0.6 -1.8 hypothetical protein compare
Atu0300 -0.6 -3.4 methyltransferase compare
Atu3727 -0.6 -1.9 hypothetical protein compare
Atu2824 -0.6 -2.7 hypothetical protein compare
Atu8195 -0.6 -1.4 hypothetical protein compare
Atu3496 -0.6 -2.3 hypothetical protein compare
Atu1724 -0.6 -2.6 hypothetical protein compare
Atu0836 -0.6 -1.5 Glutathione-S-transferase compare
Atu2267 -0.5 -2.6 hypothetical protein compare
Atu2427 -0.5 -3.9 ABC transporter, membrane spanning protein compare
Atu4686 -0.5 -2.1 hypothetical protein compare
Atu5444 -0.5 -1.6 short-chain dehydrogenase compare
Atu8025 -0.5 -1.1 hypothetical protein compare
Atu5437 -0.5 -1.6 hypothetical protein compare
Atu2808 -0.5 -3.1 cobyric acid synthase compare


Specific Phenotypes

For 8 genes in this experiment

For nitrogen source L-Pyroglutamic acid in Agrobacterium fabrum C58

For nitrogen source L-Pyroglutamic acid across organisms