Experiment set3IT086 for Agrobacterium fabrum C58

Compare to:

Nicotinamide nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu3707 -6.5 -4.5 phosphoserine aminotransferase compare
Atu4616 -5.6 -3.8 dTDP-4-dehydrorhamnose reductase compare
Atu3706 -5.2 -11.9 D-3-phosphoglycerate dehydrogenase compare
Atu1750 -4.5 -6.8 phosphoribosyl c-AMP cyclohydrolase compare
Atu4166 -4.5 -4.3 UDP-glucose 4-epimerase compare
Atu2040 -4.5 -8.0 phosphoserine phosphatase compare
Atu0043 -4.4 -3.7 imidazoleglycerol-phosphate dehydratase compare
Atu3469 -4.2 -4.1 phosphoglyceromutase compare
Atu3740 -4.1 -9.8 fructose bisphosphate aldolase compare
Atu0679 -4.0 -7.9 ATP phosphoribosyltransferase compare
Atu0099 -3.9 -15.5 prephenate dehydratase compare
Atu0537 -3.7 -8.1 histidinol dehydrogenase compare
Atu1030 -3.7 -3.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0039 -3.7 -3.5 imidazoleglycerol-phosphate synthase cyclase compare
Atu1687 -3.6 -12.4 anthranilate phosphoribosyltransferase compare
Atu2289 -3.6 -19.9 anthranilate synthase component I and II compare
Atu4505 -3.4 -12.6 LacI family transcriptional regulator compare
Atu1688 -3.3 -8.8 indole-3-glycerol-phosphate synthase compare
Atu5115 -3.2 -2.2 hypothetical protein compare
Atu0035 -3.1 -13.5 phosphoenolpyruvate carboxykinase compare
Atu0678 -3.1 -8.9 histidyl-tRNA synthetase compare
Atu3739 -3.0 -4.1 phosphoglycerate kinase compare
Atu4617 -2.9 -11.6 dTDP-D-glucose-4,6-dehydratase compare
Atu4615 -2.9 -15.9 glucose-1-phosphate thymidylyltransferase compare
Atu2650 -2.9 -13.5 glycerol-3-phosphate dehydrogenase compare
Atu2791 -2.9 -10.9 3-isopropylmalate dehydrogenase compare
Atu4614 -2.8 -13.0 glycosyltransferase compare
Atu4613 -2.8 -16.3 glycosyltransferase compare
Atu1620 -2.8 -14.2 triosephosphate isomerase compare
Atu1446 -2.8 -4.6 two component response regulator compare
Atu2066 -2.7 -15.3 pyrazinamidase/nicotinamidase compare
Atu0017 -2.7 -4.4 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0040 -2.7 -1.6 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu2264 -2.7 -12.4 2-isopropylmalate synthase compare
Atu4618 -2.7 -12.6 dTDP-rhamnose-3,5-epimerase compare
Atu2709 -2.6 -17.0 3-isopropylmalate dehydratase, large subunit compare
Atu3885 -2.6 -8.9 inositol monophosphatase compare
Atu1844 -2.6 -5.6 Phosphoribosylformylglycinamidine synthetase compare
Atu0486 -2.6 -6.6 dihydroorotate dehydrogenase compare
Atu1850 -2.5 -4.1 phosphoribosylformylglycinamidine synthetase II compare
Atu5142 -2.5 -2.2 hypothetical protein compare
Atu2036 -2.5 -14.4 acetolactate synthase III, large subunit compare
Atu3353 -2.4 -13.2 mannose-1-phosphate guanylyltransferase compare
Atu2790 -2.4 -3.4 3-isopropylmalate dehydratase, small subunit compare
Atu0399 -2.4 -6.4 dihydroorotase compare
Atu0041 -2.4 -3.5 glutamine amidotransferase compare
Atu3311 -2.4 -15.8 phosphomannose isomerase compare
Atu1307 -2.3 -6.2 dihydroorotase compare
Atu2183 -2.2 -10.6 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu1588 -2.1 -7.3 homoserine dehydrogenase compare
Atu1205 -2.1 -10.0 threonine dehydratase compare
Atu1140 -2.1 -6.9 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0038 -2.0 -6.6 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0298 -2.0 -7.9 orotidine 5 compare
Atu0432 -2.0 -7.4 O-succinylhomoserine sulfhydrylase compare
Atu3754 -2.0 -4.7 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1845 -2.0 -5.3 phosphoribosylformylglycinamidine synthase I compare
Atu2718 -2.0 -7.8 homoserine O-succinyltransferase compare
Atu1141 -2.0 -5.9 Phosphoribosylglycinamide synthetase compare
Atu1075 -1.9 -6.7 amidophosphoribosyltransferase compare
Atu1308 -1.9 -5.7 aspartate carbamoyl transferase catalytic subunit compare
Atu0400 -1.9 -4.8 orotate phosphoribosyltransferase compare
Atu0026 -1.8 -1.6 hypothetical protein compare
Atu6156 -1.7 -3.4 virA/G regulated gene compare
Atu4711 -1.6 -6.6 two component sensor kinase compare
Atu1359 -1.6 -1.5 dnaK deletion suppressor protein compare
Atu0332 -1.6 -8.6 RNA polymerase sigma-54 factor compare
Atu0647 -1.5 -6.4 phosphoribosylamine--glycine ligase compare
Atu0086 -1.5 -1.7 ribosome-binding factor A compare
Atu2015 -1.5 -9.0 aminotransferase compare
Atu3755 -1.4 -5.6 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2747 -1.4 -8.1 hypothetical protein compare
Atu6098 -1.3 -0.6 transcriptional regulator, HTH family compare
Atu5430 -1.3 -0.8 hypothetical protein compare
Atu2432 -1.2 -2.4 hypothetical protein compare
Atu3496 -1.2 -3.2 hypothetical protein compare
Atu3012 -1.2 -1.7 hypothetical protein compare
Atu5502 -1.1 -2.1 hypothetical protein compare
Atu1456 -1.1 -5.7 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu2376 -1.1 -1.3 hypothetical protein compare
Atu1445 -1.0 -5.1 two component sensor kinase compare
Atu5156 -1.0 -2.5 short chain dehydrogenase dehydrogenases compare
Atu0030 -1.0 -1.4 phosphocarrier protein HPr compare
Atu4773 -1.0 -2.0 two component response regulator compare
Atu1714 -1.0 -1.7 exonuclease III compare
Atu0876 -1.0 -1.6 superoxide dismutase compare
Atu8162 -0.9 -1.3 hypothetical protein compare
Atu2155 -0.9 -7.4 methionine synthase compare
Atu3009 -0.9 -1.2 exopolysaccharide production protein compare
Atu4608 -0.9 -6.8 hypothetical protein compare
Atu0566 -0.9 -1.8 hypothetical protein compare
Atu0361 -0.9 -1.8 transcriptional regulator compare
Atu3001 -0.9 -1.6 hypothetical protein compare
Atu5047 -0.8 -1.7 hypothetical protein compare
Atu1810 -0.8 -1.2 hypothetical protein compare
Atu0767 -0.8 -3.5 cytochrome c oxidase subunit II compare
Atu3120 -0.8 -1.5 hypothetical protein compare
Atu2163 -0.8 -1.6 hypothetical protein compare
Atu1457 -0.8 -1.9 hypothetical protein compare
Atu6125 -0.8 -1.9 conjugative transfer protein, Dtr system compare
Atu1573 -0.8 -1.6 hypothetical protein compare
Atu5167 -0.8 -1.8 type IV secretion protein AvhB6 compare
Atu1774 -0.8 -4.8 ABC transporter, substrate binding protein (peptide) compare
Atu2758 -0.7 -4.2 ammonium transporter compare
Atu4317 -0.7 -2.1 TetR family transcriptional regulator compare
Atu2270 -0.7 -0.9 ATP-dependent Clp protease, proteolytic subunit compare
Atu2115 -0.7 -4.5 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu8159 -0.7 -1.8 hypothetical protein compare
Atu2832 -0.7 -3.2 tRNA modification GTPase compare
Atu0184 -0.7 -2.2 glucokinase compare
Atu0346 -0.7 -2.1 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu6121 -0.7 -2.6 conserved hypothetical protein compare
Atu1686 -0.7 -5.5 peptidyl-prolyl cis-trans isomerse D compare
Atu2379 -0.7 -4.2 phosphomannomutase compare
Atu1163 -0.7 -1.6 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2757 -0.7 -2.8 nitrogen regulatory protein PII compare
Atu4173 -0.7 -2.0 phosphoenolpyruvate-protein phosphotransferase compare
Atu1023 -0.7 -1.5 hypothetical protein compare
Atu4890 -0.7 -1.4 IS426 transposase compare
Atu4217 -0.7 -1.6 TetR family transcriptional regulator compare
Atu4502 -0.7 -3.8 cobalamin synthesis protein compare
Atu1454 -0.7 -3.8 siroheme synthase compare
Atu0845 -0.7 -2.0 hypothetical protein compare
Atu5429 -0.6 -1.4 transcriptional regulator compare
Atu2439 -0.6 -1.3 hypothetical protein compare
Atu5489 -0.6 -1.8 hypothetical protein compare
Atu1846 -0.6 -1.4 hypothetical protein compare
Atu3400 -0.6 -2.1 hypothetical protein compare
Atu1464 -0.6 -3.7 glycine cleavage system T protein, aminomethyltransferase compare
Atu2554 -0.6 -1.6 lysyl-tRNA synthetase compare
Atu8099 -0.6 -0.8 hypothetical protein compare
Atu3763 -0.6 -1.2 hypothetical protein compare
Atu0147 -0.6 -2.1 hypothetical protein compare
Atu4609 -0.6 -4.7 glycosyltransferase compare
Atu1154 -0.6 -1.7 hypothetical protein compare
Atu0861 -0.6 -1.6 hypothetical protein compare
Atu2200 -0.6 -2.1 cold shock protein compare
Atu0206 -0.6 -1.8 hypothetical protein compare
Atu0819 -0.6 -2.0 hypothetical protein compare
Atu1589 -0.6 -2.6 aminotransferase, class I compare
Atu8055 -0.6 -1.4 hypothetical protein compare
Atu6065 -0.6 -1.8 conserved hypothetical protein compare
Atu0354 -0.6 -1.2 ferric uptake regulator compare
Atu6058 -0.6 -2.0 ABC transporter, nucleotide binding/ATPase protein (nitrate/sulfonates) compare
Atu0322 -0.6 -3.4 enoyl CoA hydratase compare
Atu2811 -0.6 -3.2 hypothetical protein compare
Atu2812 -0.6 -2.1 hypothetical protein compare
Atu5535 -0.6 -2.1 ABC transporter nucleotide binding/ATPase compare
Atu0079 -0.6 -2.7 Atu0079-1 mutant of pfkB family carbohydrate kinase compare
Atu1685 -0.5 -0.7 hypothetical protein compare
Atu0525 -0.5 -2.1 transcriptional regulator, LuxR family compare
Atu3429 -0.5 -1.0 hypothetical protein compare
Atu1470 -0.5 -0.5 Camphor resistance protein compare
Atu2267 -0.5 -3.0 hypothetical protein compare
Atu3045 -0.5 -1.8 hypothetical protein compare
Atu5408 -0.5 -2.3 ABC transporter membrane spanning protein (amino acid) compare
Atu2209 -0.5 -1.7 pyrroline-5-carboxylate reductase compare
Atu2158 -0.5 -2.5 hypothetical protein compare
Atu0422 -0.5 -0.9 ABC transporter, membrane spanning protein compare
Atu4837 -0.5 -3.0 hypothetical protein compare
Atu6086 -0.5 -1.8 ABC transporter, membrane spanning protein (nitrate/sulfonate) compare
Atu0544 -0.5 -1.1 hypothetical protein compare
Atu2436 -0.5 -2.0 hypothetical protein compare
Atu6120 -0.5 -1.6 HNS-type DNA binding protein compare
Atu2201 -0.5 -1.4 hydrolase compare
Atu2710 -0.5 -3.1 hypothetical protein compare
Atu2207 -0.5 -1.2 two component sensor kinase compare
Atu5195 -0.5 -1.7 LysR family transcriptional regulator compare
Atu5519 -0.5 -1.2 hypothetical protein compare
Atu0631 -0.5 -3.1 molybdenum cofactor biosynthesis protein B compare
Atu6197 -0.5 -1.2 agrocinopine phosphodiesterase compare
Atu4610 -0.5 -3.5 sugar nucleotide epimerase/dehydratase compare
Atu2787 -0.5 -0.7 hypothetical protein compare
Atu1455 -0.5 -2.3 hypothetical protein compare
Atu1804 -0.5 -2.1 hypothetical protein compare
Atu3461 -0.5 -1.6 GntR family transcriptional regulator compare
Atu0501 -0.5 -3.9 acyl-CoA dehydrogenase compare
Atu0962 -0.5 -2.2 hypothetical protein compare
Atu1103 -0.5 -1.3 rRNA-adenine N6,N6-dimethyltransferase compare
Atu1358 -0.5 -2.1 hypothetical protein compare
Atu2746 -0.5 -1.3 hypothetical protein compare
Atu2777 -0.5 -3.4 hypothetical protein compare
Atu0276 -0.5 -1.6 hypothetical protein compare
Atu0524 -0.5 -2.2 transcriptional regulator, LuxR family compare
Atu6053 -0.5 -1.1 conserved hypothetical protein compare
Atu0189 -0.5 -1.6 ABC transporter, membrane spanning protein (peptide) compare
Atu5130 -0.5 -1.6 attachment protein compare
Atu0817 -0.5 -3.0 sulfate adenylate transferase, subunit 2 compare
Atu5538 -0.5 -1.3 hypothetical protein compare
Atu4527 -0.5 -1.0 hypothetical protein compare
Atu2808 -0.5 -3.1 cobyric acid synthase compare
Atu0277 -0.5 -2.2 hypothetical protein compare
Atu0190 -0.5 -2.7 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu8034 -0.5 -2.3 hypothetical protein compare
Atu1642 -0.5 -1.3 hypothetical protein compare
Atu6117 -0.5 -2.0 NTP pyrophosphohydrolase, MutT family compare
Atu4176 -0.5 -3.1 hypothetical protein compare
Atu0981 -0.5 -2.8 glutamate-ammonia-ligase adenylyltransferase compare
Atu3075 -0.5 -3.1 TetR family transcriptional regulator compare
Atu0939 -0.4 -1.5 PemI protein compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source Nicotinamide in Agrobacterium fabrum C58

For nitrogen source Nicotinamide across organisms