Experiment set3IT081 for Agrobacterium fabrum C58

Compare to:

5-Aminolevulinic acid nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu5142 -2.8 -2.4 hypothetical protein compare
Atu2040 -2.8 -7.3 phosphoserine phosphatase compare
Atu0679 -2.5 -5.6 ATP phosphoribosyltransferase compare
Atu4773 -2.5 -2.9 two component response regulator compare
Atu0035 -2.3 -9.8 phosphoenolpyruvate carboxykinase compare
Atu3469 -2.3 -3.6 phosphoglyceromutase compare
Atu0017 -2.2 -3.4 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu3707 -2.2 -3.6 phosphoserine aminotransferase compare
Atu8056 -2.1 -1.9 hypothetical protein compare
Atu1687 -2.0 -9.9 anthranilate phosphoribosyltransferase compare
Atu0043 -1.9 -3.3 imidazoleglycerol-phosphate dehydratase compare
Atu3706 -1.9 -9.1 D-3-phosphoglycerate dehydrogenase compare
Atu0678 -1.9 -7.1 histidyl-tRNA synthetase compare
Atu1030 -1.8 -2.0 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1750 -1.7 -5.8 phosphoribosyl c-AMP cyclohydrolase compare
Atu3740 -1.7 -9.0 fructose bisphosphate aldolase compare
Atu2289 -1.7 -10.8 anthranilate synthase component I and II compare
Atu1688 -1.6 -5.0 indole-3-glycerol-phosphate synthase compare
Atu6114 -1.6 -1.8 hypothetical protein compare
Atu0537 -1.6 -5.6 histidinol dehydrogenase compare
Atu3739 -1.6 -3.3 phosphoglycerate kinase compare
Atu0346 -1.5 -3.9 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu4217 -1.5 -1.6 TetR family transcriptional regulator compare
Atu1620 -1.5 -9.1 triosephosphate isomerase compare
Atu5045 -1.5 -1.5 hypothetical protein compare
Atu0876 -1.4 -1.8 superoxide dismutase compare
Atu2718 -1.4 -5.4 homoserine O-succinyltransferase compare
Atu5475 -1.4 -1.6 hypothetical protein compare
Atu0040 -1.4 -1.2 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1359 -1.4 -1.4 dnaK deletion suppressor protein compare
Atu1446 -1.3 -1.7 two component response regulator compare
Atu4019 -1.3 -6.9 two component response regulator compare
Atu6159 -1.3 -2.3 hypothetical protein compare
Atu0400 -1.3 -5.1 orotate phosphoribosyltransferase compare
Atu8088 -1.3 -2.8 hypothetical protein compare
Atu1445 -1.3 -4.7 two component sensor kinase compare
Atu0031 -1.2 -1.6 PTS system, IIA component compare
Atu5171 -1.2 -3.1 type IV secretion protein AvhB10 compare
Atu0977 -1.2 -3.8 serine protease DO-like protease compare
Atu4018 -1.2 -7.4 two component sensor kinase compare
Atu3301 -1.2 -7.2 short-chain alcohol dehydrogenase compare
Atu0332 -1.2 -6.3 RNA polymerase sigma-54 factor compare
Atu3120 -1.1 -1.4 hypothetical protein compare
Atu5145 -1.1 -2.1 acetyltransferase compare
Atu3755 -1.1 -4.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0099 -1.1 -5.7 prephenate dehydratase compare
Atu4711 -1.0 -5.2 two component sensor kinase compare
Atu5468 -1.0 -1.7 hypothetical protein compare
Atu0189 -1.0 -2.9 ABC transporter, membrane spanning protein (peptide) compare
Atu3300 -1.0 -6.4 aminotransferase compare
Atu0777 -1.0 -1.0 hypothetical protein compare
Atu4161 -1.0 -2.4 hypothetical protein compare
Atu0184 -1.0 -2.4 glucokinase compare
Atu1810 -1.0 -1.4 hypothetical protein compare
Atu5486 -1.0 -2.4 hypothetical protein compare
Atu3754 -0.9 -5.6 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu4505 -0.9 -5.8 LacI family transcriptional regulator compare
Atu0971 -0.9 -3.4 two component sensor kinase compare
Atu3885 -0.9 -5.6 inositol monophosphatase compare
Atu5173 -0.9 -1.1 dehydrogenase compare
Atu1850 -0.9 -2.2 phosphoribosylformylglycinamidine synthetase II compare
Atu0041 -0.9 -1.3 glutamine amidotransferase compare
Atu1774 -0.9 -4.7 ABC transporter, substrate binding protein (peptide) compare
Atu0486 -0.9 -3.4 dihydroorotate dehydrogenase compare
Atu3075 -0.9 -6.0 TetR family transcriptional regulator compare
Atu5429 -0.9 -2.0 transcriptional regulator compare
Atu0225 -0.9 -0.9 hypothetical protein compare
Atu1457 -0.8 -2.7 hypothetical protein compare
Atu0399 -0.8 -2.8 dihydroorotase compare
Atu1062 -0.8 -1.5 phosphatidylserine synthase compare
Atu0038 -0.8 -3.4 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0432 -0.8 -3.9 O-succinylhomoserine sulfhydrylase compare
Atu2747 -0.8 -5.5 hypothetical protein compare
Atu0795 -0.8 -1.9 hypothetical protein compare
Atu1714 -0.8 -1.5 exonuclease III compare
Atu0298 -0.8 -3.5 orotidine 5 compare
Atu2678 -0.8 -4.2 2'-5' RNA ligase compare
Atu0422 -0.7 -1.4 ABC transporter, membrane spanning protein compare
Atu1307 -0.7 -3.6 dihydroorotase compare
Atu2155 -0.7 -5.8 methionine synthase compare
Atu1141 -0.7 -3.1 Phosphoribosylglycinamide synthetase compare
Atu5451 -0.7 -0.5 hypothetical protein compare
Atu5408 -0.7 -3.3 ABC transporter membrane spanning protein (amino acid) compare
Atu6153 -0.7 -1.8 conserved hypothetical protein compare
Atu5095 -0.7 -1.9 hypothetical protein compare
Atu1952 -0.7 -0.9 hypothetical protein compare
Atu1163 -0.7 -1.3 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2800 -0.7 -1.7 precorrin-3B C17-methyltransferase compare
Atu4232 -0.7 -3.3 GntR family transcriptional regulator compare
Atu1844 -0.7 -2.4 Phosphoribosylformylglycinamidine synthetase compare
Atu3293 -0.7 -3.7 D-amino acid dehydrogenase small subunit compare
Atu2125 -0.7 -1.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu0319 -0.7 -1.0 ubiquinone biosynthesis protein compare
Atu0895 -0.7 -1.8 ABC transporter, substrate binding protein compare
Atu1075 -0.7 -3.2 amidophosphoribosyltransferase compare
Atu4702 -0.7 -3.4 GntR family transcriptional regulator compare
Atu2791 -0.7 -3.2 3-isopropylmalate dehydrogenase compare
Atu5097 -0.6 -2.1 ATP-dependent DNA ligase compare
Atu0885 -0.6 -1.5 hypothetical protein compare
Atu0846 -0.6 -1.9 transcriptional regulator, MarR family compare
Atu6072 -0.6 -2.3 thermophilic desulfurizing enzyme compare
Atu0784 -0.6 -2.2 hypothetical protein compare
Atu5189 -0.6 -2.5 hypothetical protein compare
Atu0690 -0.6 -1.5 hypothetical protein compare
Atu1308 -0.6 -3.3 aspartate carbamoyl transferase catalytic subunit compare
Atu5115 -0.6 -0.7 hypothetical protein compare
Atu2650 -0.6 -4.2 glycerol-3-phosphate dehydrogenase compare
Atu0528 -0.6 -1.7 large conductance mechanosensitive channel protein compare
Atu6108 -0.6 -1.6 alkylphosphonate uptake protein compare
Atu1845 -0.6 -2.2 phosphoribosylformylglycinamidine synthase I compare
Atu1503 -0.6 -0.9 hypothetical protein compare
Atu0577 -0.6 -1.4 FLAF protein compare
Atu1737 -0.6 -1.7 hypothetical protein compare
Atu0039 -0.6 -1.1 imidazoleglycerol-phosphate synthase cyclase compare
Atu1462 -0.6 -4.5 glycine cleavage system protein P2 compare
Atu2758 -0.6 -3.6 ammonium transporter compare
Atu0986 -0.6 -0.9 hypothetical protein compare
Atu8138 -0.6 -1.2 hypothetical protein compare
Atu5081 -0.6 -2.4 ABC transporter membrane spanning protein (sugar) compare
Atu1364 -0.6 -2.7 ATP-dependent Clp protease, ATP-binding subunit compare
Atu5163 -0.6 -0.9 type IV secretion protein AvhB2 compare
Atu3353 -0.6 -3.4 mannose-1-phosphate guanylyltransferase compare
Atu2427 -0.6 -3.5 ABC transporter, membrane spanning protein compare
Atu5008 -0.6 -1.8 hypothetical protein compare
Atu2757 -0.6 -2.3 nitrogen regulatory protein PII compare
Atu0803 -0.6 -4.4 pyruvate,orthophosphate dikinase compare
Atu1546 -0.5 -2.7 transcriptional regulator, MerR family compare
Atu2709 -0.5 -4.4 3-isopropylmalate dehydratase, large subunit compare
Atu8177 -0.5 -1.5 hypothetical protein compare
Atu4055 -0.5 -3.1 endo-1,3-1,4-beta-glycanase compare
Atu3497 -0.5 -1.6 hypothetical protein compare
Atu1361 -0.5 -2.1 hypothetical protein compare
Atu1573 -0.5 -1.0 hypothetical protein compare
Atu2025 -0.5 -1.8 transcriptional regulator compare
Atu4159 -0.5 -2.3 AsnC family transcriptional regulator compare
Atu3215 -0.5 -3.0 oligopeptide ABC transporter ATPase compare
Atu0947 -0.5 -1.4 transcriptional regulator, AsnC family compare
Atu2522 -0.5 -3.7 agrobacterium chromosomal virulence protein B compare
Atu1456 -0.5 -3.5 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1140 -0.5 -2.4 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu5502 -0.5 -1.2 hypothetical protein compare
Atu2183 -0.5 -2.3 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4643 -0.5 -1.3 hypothetical protein compare
Atu3122 -0.5 -1.5 cold shock protein compare
Atu2812 -0.5 -1.5 hypothetical protein compare
Atu8163 -0.5 -1.7 hypothetical protein compare
Atu8165 -0.5 -1.0 hypothetical protein compare
Atu5443 -0.5 -1.6 TetR family transcriptional regulator compare
Atu5489 -0.5 -1.5 hypothetical protein compare
Atu6014 -0.5 -2.1 6b protein compare
Atu2797 -0.5 -2.4 cobalamin biosynthesis protein compare
Atu2772 -0.5 -2.7 Invasion protein A compare
Atu3429 -0.5 -0.9 hypothetical protein compare
Atu1970 -0.5 -1.9 hypothetical protein compare
Atu0786 -0.5 -2.3 peptidase, family M16 compare
Atu3295 -0.5 -2.3 hypothetical protein compare
Atu6042 -0.5 -2.0 autoinducer synthesis protein compare
Atu2264 -0.5 -3.3 2-isopropylmalate synthase compare
Atu4061 -0.5 -1.6 exopolysaccharide production repressor protein compare
Atu2795 -0.5 -2.7 cobalamin biosynthetic protein compare
Atu3699 -0.5 -2.2 hypothetical protein compare
Atu3291 -0.5 -2.5 Lpr family transcriptional regulator compare
Atu0188 -0.5 -1.8 ABC transporter, membrane spanning protein (peptide) compare
Atu6164 -0.5 -2.2 trans-zeatin secretion protein compare
Atu5448 -0.5 -1.3 hypothetical protein compare
Atu2083 -0.5 -1.7 DNA repair protein RecN compare
Atu5186 -0.5 -0.7 hypothetical protein compare
Atu0544 -0.5 -1.0 hypothetical protein compare
Atu0943 -0.5 -1.2 hypothetical protein compare
Atu6158 -0.5 -1.0 conserved hypothetical protein compare
Atu2728 -0.5 -2.1 beta (1-->2) glucan export ATP-binding protein compare
Atu0086 -0.5 -0.7 ribosome-binding factor A compare
Atu1463 -0.5 -2.0 glycine cleavage system component H compare
Atu0190 -0.5 -2.6 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0606 -0.5 -0.9 hypothetical protein compare
Atu2824 -0.5 -1.8 hypothetical protein compare
Atu0565 -0.5 -2.0 hypothetical protein compare
Atu2376 -0.5 -1.5 hypothetical protein compare
Atu1725 -0.5 -2.3 hypothetical protein compare
Atu0185 -0.5 -1.8 methylglyoxal synthase compare
Atu6103 -0.5 -1.9 plasmid partitioning protein compare
Atu8151 -0.5 -1.1 hypothetical protein compare
Atu3498 -0.4 -3.1 aldehyde dehydrogenase compare
Atu1028 -0.4 -1.0 hypothetical protein compare
Atu2201 -0.4 -0.9 hydrolase compare
Atu6075 -0.4 -1.9 ABC transporter, membrane spanning protein (peptide) compare
Atu8185 -0.4 -1.3 hypothetical protein compare
Atu4799 -0.4 -2.3 dTDP-4-dehydrorhamnose 3,5-epimerase compare
Atu3522 -0.4 -1.7 glucans biosynthesis protein compare
Atu6169 -0.4 -1.5 component of type IV secretion system compare
Atu5102 -0.4 -1.3 hypothetical protein compare
Atu3467 -0.4 -0.9 hypothetical protein compare
Atu0152 -0.4 -1.1 hypothetical protein compare
Atu8195 -0.4 -1.2 hypothetical protein compare
Atu5108 -0.4 -1.7 conjugal transfer coupling protein TraG compare
Atu3400 -0.4 -0.8 hypothetical protein compare
Atu1629 -0.4 -0.7 transcriptional regulator, ArsR family compare
Atu3730 -0.4 -0.8 hypothetical protein compare
Atu2802 -0.4 -3.0 precorrin-8X methylmutase compare
Atu5439 -0.4 -1.5 hypothetical protein compare


Specific Phenotypes

For 3 genes in this experiment

For nitrogen source 5-Aminolevulinic acid in Agrobacterium fabrum C58

For nitrogen source 5-Aminolevulinic acid across organisms