Experiment set3IT080 for Agrobacterium fabrum C58

Compare to:

5-Aminolevulinic acid nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu2684 -3.5 -3.2 hypothetical protein compare
Atu1359 -3.3 -1.8 dnaK deletion suppressor protein compare
Atu1030 -3.1 -2.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3707 -2.9 -4.5 phosphoserine aminotransferase compare
Atu4773 -2.8 -2.9 two component response regulator compare
Atu3469 -2.7 -4.0 phosphoglyceromutase compare
Atu5485 -2.6 -2.4 hypothetical protein compare
Atu5142 -2.5 -2.1 hypothetical protein compare
Atu6195 -2.3 -1.7 conserved hypothetical protein compare
Atu5164 -2.2 -0.9 type IV secretion protein AvhB3 compare
Atu1446 -2.2 -2.4 two component response regulator compare
Atu0043 -2.2 -3.4 imidazoleglycerol-phosphate dehydratase compare
Atu0041 -2.1 -1.7 glutamine amidotransferase compare
Atu0035 -2.0 -8.5 phosphoenolpyruvate carboxykinase compare
Atu5501 -1.8 -2.1 hypothetical protein compare
Atu5163 -1.8 -2.0 type IV secretion protein AvhB2 compare
Atu1687 -1.7 -8.0 anthranilate phosphoribosyltransferase compare
Atu0876 -1.7 -2.4 superoxide dismutase compare
Atu3706 -1.7 -7.4 D-3-phosphoglycerate dehydrogenase compare
Atu4018 -1.7 -9.8 two component sensor kinase compare
Atu5157 -1.7 -2.3 hypothetical protein compare
Atu0678 -1.6 -5.4 histidyl-tRNA synthetase compare
Atu2289 -1.6 -10.8 anthranilate synthase component I and II compare
Atu1445 -1.6 -5.9 two component sensor kinase compare
Atu0723 -1.6 -2.5 FAD dependent oxidoreductase compare
Atu4019 -1.6 -7.7 two component response regulator compare
Atu0346 -1.6 -2.3 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1750 -1.5 -3.1 phosphoribosyl c-AMP cyclohydrolase compare
Atu2040 -1.5 -5.0 phosphoserine phosphatase compare
Atu3740 -1.5 -7.0 fructose bisphosphate aldolase compare
Atu0188 -1.5 -3.4 ABC transporter, membrane spanning protein (peptide) compare
Atu0537 -1.4 -6.5 histidinol dehydrogenase compare
Atu3301 -1.4 -6.2 short-chain alcohol dehydrogenase compare
Atu6189 -1.4 -0.8 protein secretion chaperone compare
Atu3663 -1.4 -1.9 hypothetical protein compare
Atu0189 -1.4 -3.3 ABC transporter, membrane spanning protein (peptide) compare
Atu0679 -1.3 -4.1 ATP phosphoribosyltransferase compare
Atu0332 -1.3 -8.3 RNA polymerase sigma-54 factor compare
Atu1688 -1.3 -5.7 indole-3-glycerol-phosphate synthase compare
Atu1620 -1.3 -7.1 triosephosphate isomerase compare
Atu3730 -1.3 -1.5 hypothetical protein compare
Atu0030 -1.3 -1.5 phosphocarrier protein HPr compare
Atu3300 -1.2 -6.4 aminotransferase compare
Atu5045 -1.2 -1.2 hypothetical protein compare
Atu2207 -1.2 -3.0 two component sensor kinase compare
Atu6009 -1.2 -2.2 indole-3-lactate synthase compare
Atu5160 -1.1 -1.9 transcriptional regulator protein compare
Atu0031 -1.1 -1.3 PTS system, IIA component compare
Atu1308 -1.1 -5.0 aspartate carbamoyl transferase catalytic subunit compare
Atu2335 -1.0 -2.2 hypothetical protein compare
Atu5502 -1.0 -2.3 hypothetical protein compare
Atu2718 -1.0 -4.7 homoserine O-succinyltransferase compare
Atu3075 -1.0 -5.0 TetR family transcriptional regulator compare
Atu3885 -1.0 -5.3 inositol monophosphatase compare
Atu3739 -0.9 -1.5 phosphoglycerate kinase compare
Atu0803 -0.9 -6.8 pyruvate,orthophosphate dikinase compare
Atu0038 -0.9 -3.8 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu5517 -0.9 -1.1 hypothetical protein compare
Atu0413 -0.9 -1.6 stress induced protein compare
Atu1573 -0.9 -1.4 hypothetical protein compare
Atu2634 -0.9 -1.1 hypothetical protein compare
Atu1714 -0.9 -1.4 exonuclease III compare
Atu4711 -0.9 -3.4 two component sensor kinase compare
Atu5437 -0.8 -2.1 hypothetical protein compare
Atu0885 -0.8 -2.6 hypothetical protein compare
Atu2800 -0.8 -3.1 precorrin-3B C17-methyltransferase compare
Atu3461 -0.8 -1.7 GntR family transcriptional regulator compare
Atu5415 -0.8 -2.0 hypothetical protein compare
Atu0971 -0.8 -2.5 two component sensor kinase compare
Atu5150 -0.8 -1.8 glutathione S-transferase compare
Atu5115 -0.8 -0.8 hypothetical protein compare
Atu0099 -0.8 -3.8 prephenate dehydratase compare
Atu0566 -0.8 -1.3 hypothetical protein compare
Atu1850 -0.8 -2.1 phosphoribosylformylglycinamidine synthetase II compare
Atu2790 -0.8 -1.5 3-isopropylmalate dehydratase, small subunit compare
Atu0040 -0.8 -0.8 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu8138 -0.8 -1.3 hypothetical protein compare
Atu0977 -0.7 -1.9 serine protease DO-like protease compare
Atu2747 -0.7 -5.0 hypothetical protein compare
Atu8099 -0.7 -0.9 hypothetical protein compare
Atu6114 -0.7 -1.0 hypothetical protein compare
Atu0017 -0.7 -1.5 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1766 -0.7 -2.4 hypothetical protein compare
Atu3121 -0.7 -0.9 cold shock protein compare
Atu0400 -0.7 -2.5 orotate phosphoribosyltransferase compare
Atu2758 -0.7 -4.2 ammonium transporter compare
Atu5183 -0.7 -2.0 hypothetical protein compare
Atu1149 -0.7 -1.2 adenylate cyclase compare
Atu0460 -0.7 -2.6 hypothetical protein compare
Atu6159 -0.7 -1.3 hypothetical protein compare
Atu3755 -0.7 -2.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1484 -0.7 -1.6 transcriptional regulator compare
Atu0978 -0.7 -4.4 two component response regulator compare
Atu1503 -0.7 -0.9 hypothetical protein compare
Atu1774 -0.7 -4.0 ABC transporter, substrate binding protein (peptide) compare
Atu6036 -0.7 -0.4 entry-exclusion protein compare
Atu1801 -0.7 -1.0 hypothetical protein compare
Atu8177 -0.7 -2.7 hypothetical protein compare
Atu8203 -0.7 -1.1 hypothetical protein compare
Atu1462 -0.7 -4.7 glycine cleavage system protein P2 compare
Atu5018 -0.6 -3.1 hypothetical protein compare
Atu2433 -0.6 -0.9 hypothetical protein compare
Atu1110 -0.6 -1.8 cytosol aminopeptidase compare
Atu0039 -0.6 -1.1 imidazoleglycerol-phosphate synthase cyclase compare
Atu6168 -0.6 -2.0 component of type IV secretion system, pilin subunit compare
Atu0846 -0.6 -1.8 transcriptional regulator, MarR family compare
Atu4232 -0.6 -3.2 GntR family transcriptional regulator compare
Atu4280 -0.6 -2.8 short-chain dehydrogenase compare
Atu2554 -0.6 -1.5 lysyl-tRNA synthetase compare
Atu1216 -0.6 -3.2 alanyl-tRNA synthetase compare
Atu5042 -0.6 -2.8 recombinase compare
Atu4505 -0.6 -3.5 LacI family transcriptional regulator compare
Atu2650 -0.6 -3.4 glycerol-3-phosphate dehydrogenase compare
Atu5048 -0.6 -2.4 exodeoxyribonuclease III compare
Atu0184 -0.6 -1.8 glucokinase compare
Atu8151 -0.6 -1.3 hypothetical protein compare
Atu2789 -0.6 -1.4 hypothetical protein compare
Atu5149 -0.6 -1.7 acetyltransferase compare
Atu2017 -0.6 -0.8 hypothetical protein compare
Atu0953 -0.6 -0.6 hypothetical protein compare
Atu2567 -0.6 -1.5 thiamin biosynthesis protein ThiG compare
Atu5161 -0.6 -1.8 hypothetical protein compare
Atu0228 -0.6 -2.0 hypothetical protein compare
Atu1466 -0.6 -1.3 hypothetical protein compare
Atu5204 -0.6 -2.7 aldehyde dehydrogenase compare
Atu1795 -0.6 -2.0 malonate transporter compare
Atu1307 -0.6 -2.3 dihydroorotase compare
Atu2710 -0.6 -2.6 hypothetical protein compare
Atu3754 -0.6 -1.7 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu5489 -0.6 -1.6 hypothetical protein compare
Atu2155 -0.6 -4.3 methionine synthase compare
Atu3887 -0.6 -2.9 small heat shock protein compare
Atu0908 -0.6 -1.6 transcriptional regulator compare
Atu0647 -0.6 -2.3 phosphoribosylamine--glycine ligase compare
Atu5095 -0.6 -1.3 hypothetical protein compare
Atu2141 -0.6 -1.8 hypothetical protein compare
Atu3712 -0.5 -1.0 hypothetical protein compare
Atu2795 -0.5 -2.7 cobalamin biosynthetic protein compare
Atu3293 -0.5 -2.0 D-amino acid dehydrogenase small subunit compare
Atu4469 -0.5 -1.9 iron ABC transporter permease compare
Atu2522 -0.5 -3.6 agrobacterium chromosomal virulence protein B compare
Atu5054 -0.5 -1.1 hypothetical protein compare
Atu0536 -0.5 -2.6 hypothetical protein compare
Atu1141 -0.5 -1.8 Phosphoribosylglycinamide synthetase compare
Atu6094 -0.5 -2.0 conserved hypothetical protein compare
Atu1722 -0.5 -1.4 hypothetical protein compare
Atu0354 -0.5 -0.9 ferric uptake regulator compare
Atu4166 -0.5 -1.5 UDP-glucose 4-epimerase compare
Atu4055 -0.5 -2.3 endo-1,3-1,4-beta-glycanase compare
Atu2768 -0.5 -2.0 hypothetical protein compare
Atu2606 -0.5 -1.7 transcriptional regulator, GntR family compare
Atu1457 -0.5 -1.6 hypothetical protein compare
Atu6106 -0.5 -1.0 conserved hypothetical protein compare
Atu0190 -0.5 -2.7 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu6097 -0.5 -1.4 cell filamentation protein compare
Atu5184 -0.5 -1.8 LysR family transcriptional regulator compare
Atu5493 -0.5 -1.3 hypothetical protein compare
Atu3008 -0.5 -0.6 hypothetical protein compare
Atu2791 -0.5 -2.0 3-isopropylmalate dehydrogenase compare
Atu0746 -0.5 -1.4 hypothetical protein compare
Atu2555 -0.5 -1.6 L-lysine 2,3-aminomutase compare
Atu0986 -0.5 -0.7 hypothetical protein compare
Atu0795 -0.5 -1.0 hypothetical protein compare
Atu5186 -0.5 -0.6 hypothetical protein compare
Atu3073 -0.5 -2.3 aspartate racemase compare
Atu4823 -0.5 -2.9 acetyl-CoA acetyltransferase compare
Atu3012 -0.5 -0.8 hypothetical protein compare
Atu6173 -0.5 -0.7 component of type IV secretion system compare
Atu8165 -0.5 -0.7 hypothetical protein compare
Atu6186 -0.5 -1.2 virA/G regulated protein compare
Atu8166 -0.5 -1.7 hypothetical protein compare
Atu2709 -0.5 -3.5 3-isopropylmalate dehydratase, large subunit compare
Atu0533 -0.5 -1.0 putative inhibitor of septum formation compare
Atu5040 -0.5 -2.5 hypothetical protein compare
Atu2649 -0.5 -1.5 hypothetical protein compare
Atu1724 -0.5 -1.7 hypothetical protein compare
Atu0026 -0.5 -0.5 hypothetical protein compare
Atu2796 -0.5 -2.3 precorrin-4 C11-methyltransferase compare
Atu5096 -0.5 -2.0 hypothetical protein compare
Atu1770 -0.5 -2.7 glutamine synthetase compare
Atu3788 -0.5 -2.2 potassium-transporting ATPase subunit C compare
Atu4896 -0.5 -1.0 acetyltransferase compare
Atu6134 -0.5 -1.4 transcriptional regulator compare
Atu2157 -0.5 -2.3 tyrosine/serine protein phosphatase compare
Atu8117 -0.5 -1.5 hypothetical protein compare
Atu5080 -0.5 -1.6 ABC transporter membrane spanning protein (sugar) compare
Atu5429 -0.5 -1.0 transcriptional regulator compare
Atu0386 -0.5 -0.8 hypothetical protein compare
Atu3295 -0.5 -2.0 hypothetical protein compare
Atu1634 -0.5 -0.8 hypothetical protein compare
Atu1464 -0.4 -2.1 glycine cleavage system T protein, aminomethyltransferase compare
Atu5071 -0.4 -2.4 ABC transporter substrate binding protein (dipeptide) compare
Atu5470 -0.4 -0.7 hypothetical protein compare
Atu0115 -0.4 -0.5 hypothetical protein compare
Atu0277 -0.4 -1.7 hypothetical protein compare
Atu2376 -0.4 -1.7 hypothetical protein compare
Atu1062 -0.4 -0.8 phosphatidylserine synthase compare
Atu2826 -0.4 -1.5 protease heat shock protein compare
Atu3291 -0.4 -2.4 Lpr family transcriptional regulator compare
Atu1028 -0.4 -0.9 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For nitrogen source 5-Aminolevulinic acid in Agrobacterium fabrum C58

For nitrogen source 5-Aminolevulinic acid across organisms