Experiment set3IT077 for Agrobacterium fabrum C58

Compare to:

L-Serine nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu0678 -6.3 -4.4 histidyl-tRNA synthetase compare
Atu0679 -5.7 -7.9 ATP phosphoribosyltransferase compare
Atu2791 -5.6 -8.8 3-isopropylmalate dehydrogenase compare
Atu3740 -5.4 -12.6 fructose bisphosphate aldolase compare
Atu2790 -5.4 -3.1 3-isopropylmalate dehydratase, small subunit compare
Atu2264 -5.4 -16.2 2-isopropylmalate synthase compare
Atu0043 -5.4 -3.7 imidazoleglycerol-phosphate dehydratase compare
Atu2289 -5.3 -21.0 anthranilate synthase component I and II compare
Atu0099 -5.3 -15.5 prephenate dehydratase compare
Atu4505 -5.2 -12.4 LacI family transcriptional regulator compare
Atu1750 -5.2 -7.1 phosphoribosyl c-AMP cyclohydrolase compare
Atu2709 -5.1 -19.0 3-isopropylmalate dehydratase, large subunit compare
Atu1687 -5.1 -14.2 anthranilate phosphoribosyltransferase compare
Atu3469 -5.0 -3.5 phosphoglyceromutase compare
Atu1688 -5.0 -9.6 indole-3-glycerol-phosphate synthase compare
Atu0537 -4.9 -8.2 histidinol dehydrogenase compare
Atu1620 -4.8 -15.5 triosephosphate isomerase compare
Atu0432 -4.7 -10.5 O-succinylhomoserine sulfhydrylase compare
Atu0035 -4.7 -12.2 phosphoenolpyruvate carboxykinase compare
Atu2718 -4.7 -12.0 homoserine O-succinyltransferase compare
Atu0486 -4.5 -8.5 dihydroorotate dehydrogenase compare
Atu2747 -4.4 -13.7 hypothetical protein compare
Atu0041 -4.4 -4.2 glutamine amidotransferase compare
Atu2036 -4.3 -18.0 acetolactate synthase III, large subunit compare
Atu2650 -4.3 -14.8 glycerol-3-phosphate dehydrogenase compare
Atu2015 -4.2 -16.9 aminotransferase compare
Atu0017 -4.2 -4.9 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1845 -4.2 -5.6 phosphoribosylformylglycinamidine synthase I compare
Atu0038 -4.2 -5.8 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu3885 -4.2 -12.4 inositol monophosphatase compare
Atu3739 -4.0 -4.6 phosphoglycerate kinase compare
Atu1588 -4.0 -12.1 homoserine dehydrogenase compare
Atu0400 -4.0 -6.5 orotate phosphoribosyltransferase compare
Atu1205 -3.8 -14.4 threonine dehydratase compare
Atu1686 -3.8 -19.6 peptidyl-prolyl cis-trans isomerse D compare
Atu3783 -3.7 -15.7 glutamate synthase subunit beta compare
Atu1141 -3.7 -9.6 Phosphoribosylglycinamide synthetase compare
Atu0647 -3.7 -9.4 phosphoribosylamine--glycine ligase compare
Atu2115 -3.7 -16.2 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu3755 -3.6 -5.6 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1075 -3.5 -8.3 amidophosphoribosyltransferase compare
Atu1685 -3.4 -2.0 hypothetical protein compare
Atu3784 -3.4 -23.1 glutamate synthase large subunit compare
Atu0399 -3.4 -7.9 dihydroorotase compare
Atu0298 -3.4 -7.5 orotidine 5 compare
Atu1030 -3.3 -1.9 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0876 -3.3 -3.5 superoxide dismutase compare
Atu1446 -3.3 -4.8 two component response regulator compare
Atu1307 -3.2 -9.6 dihydroorotase compare
Atu0039 -3.2 -3.8 imidazoleglycerol-phosphate synthase cyclase compare
Atu1308 -3.1 -7.7 aspartate carbamoyl transferase catalytic subunit compare
Atu1759 -3.1 -14.6 L-serine dehydratase conserved
Atu1850 -3.0 -7.2 phosphoribosylformylglycinamidine synthetase II compare
Atu3754 -3.0 -4.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0040 -2.9 -1.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0332 -2.9 -14.3 RNA polymerase sigma-54 factor compare
Atu1589 -2.8 -11.5 aminotransferase, class I compare
Atu1140 -2.8 -6.0 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0030 -2.7 -2.5 phosphocarrier protein HPr compare
Atu0723 -2.7 -3.1 FAD dependent oxidoreductase compare
Atu1456 -2.7 -11.7 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1445 -2.6 -7.4 two component sensor kinase compare
Atu1844 -2.5 -4.4 Phosphoribosylformylglycinamidine synthetase compare
Atu0346 -2.4 -4.8 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1359 -2.4 -1.9 dnaK deletion suppressor protein compare
Atu0769 -2.2 -3.0 protoheme IX farnesyltransferase compare
Atu1457 -2.2 -2.2 hypothetical protein compare
Atu3706 -2.2 -7.7 D-3-phosphoglycerate dehydrogenase compare
Atu2548 -2.1 -12.2 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu8115 -2.0 -6.6 Hypothetical Protein compare
Atu1454 -2.0 -6.3 siroheme synthase compare
Atu3707 -1.8 -4.4 phosphoserine aminotransferase compare
Atu6189 -1.8 -1.4 protein secretion chaperone compare
Atu1455 -1.6 -2.7 hypothetical protein compare
Atu0422 -1.6 -2.1 ABC transporter, membrane spanning protein compare
Atu3298 -1.6 -9.0 C4-dicarboxylate transporter DctA compare
Atu1577 -1.4 -5.9 ABC transporter, substrate binding protein (amino acid) conserved
Atu1579 -1.4 -8.7 ABC transporter, membrane spanning protein (amino acid) conserved
Atu2439 -1.4 -2.2 hypothetical protein compare
Atu0031 -1.4 -1.8 PTS system, IIA component compare
Atu1163 -1.3 -1.9 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2155 -1.3 -10.7 methionine synthase compare
Atu5430 -1.3 -0.8 hypothetical protein compare
Atu1580 -1.3 -6.0 ABC transporter, nucleotide binding/ATPase protein (amino acid) compare
Atu0029 -1.3 -4.5 S-adenosylhomocysteine hydrolase compare
Atu6098 -1.2 -0.7 transcriptional regulator, HTH family compare
Atu3297 -1.2 -7.6 two component sensor kinase for C4-dicarboxylate transport compare
Atu3296 -1.2 -6.4 two component response regulator for C4-dicarboxylate transport compare
Atu4096 -1.1 -5.8 nicotinate-nucleotide pyrophosphorylase compare
Atu3290 -1.1 -8.2 phosphomethylpyrimidine kinase compare
Atu0189 -1.1 -2.6 ABC transporter, membrane spanning protein (peptide) compare
Atu0641 -1.1 -3.4 hypothetical protein compare
Atu2640 -1.1 -3.6 hypothetical protein compare
Atu0291 -1.1 -5.4 hypothetical protein compare
Atu2125 -1.1 -1.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu8052 -1.1 -1.3 hypothetical protein compare
Atu2020 -1.1 -2.6 transcriptional regulator, TetR family compare
Atu1846 -1.1 -2.0 hypothetical protein compare
Atu2209 -1.0 -3.2 pyrroline-5-carboxylate reductase compare
Atu1028 -1.0 -2.5 hypothetical protein compare
Atu1578 -1.0 -5.6 ABC transporter, membrane spanning protein (amino acid) compare
Atu1372 -1.0 -5.5 hypothetical protein compare
Atu1354 -1.0 -1.2 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu4166 -1.0 -2.8 UDP-glucose 4-epimerase compare
Atu3289 -1.0 -2.5 thiamine-phosphate pyrophosphorylase compare
Atu2376 -1.0 -0.8 hypothetical protein compare
Atu6165 -1.0 -0.8 hypothetical protein compare
Atu1748 -0.9 -5.2 NIFU-like protein compare
Atu3496 -0.9 -1.7 hypothetical protein compare
Atu4098 -0.9 -6.3 quinolinate synthetase compare
Atu4773 -0.9 -1.4 two component response regulator compare
Atu8087 -0.9 -1.1 putative peptidoglycan binding protein compare
Atu4097 -0.9 -5.7 L-aspartate oxidase compare
Atu8055 -0.9 -1.8 hypothetical protein compare
Atu3288 -0.9 -4.0 hydroxyethylthiazole kinase compare
Atu5034 -0.9 -1.6 hypothetical protein compare
Atu3730 -0.9 -1.4 hypothetical protein compare
Atu2569 -0.9 -5.7 thiamine biosynthesis protein compare
Atu0141 -0.8 -1.6 cytochrome O ubiquinol oxidase subunit I compare
Atu4779 -0.8 -3.3 hypothetical protein compare
Atu5045 -0.8 -1.0 hypothetical protein compare
Atu0566 -0.8 -1.6 hypothetical protein compare
Atu5157 -0.8 -1.8 hypothetical protein compare
Atu8162 -0.8 -1.2 hypothetical protein compare
Atu2827 -0.8 -2.6 hypothetical protein compare
Atu4217 -0.8 -1.9 TetR family transcriptional regulator compare
Atu0184 -0.8 -2.1 glucokinase compare
Atu1774 -0.8 -3.6 ABC transporter, substrate binding protein (peptide) compare
Atu6173 -0.8 -2.5 component of type IV secretion system compare
Atu4613 -0.8 -5.4 glycosyltransferase compare
Atu0190 -0.7 -4.6 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu3482 -0.7 -3.4 pantoate--beta-alanine ligase compare
Atu4617 -0.7 -4.5 dTDP-D-glucose-4,6-dehydratase compare
Atu0861 -0.7 -1.4 hypothetical protein compare
Atu2163 -0.7 -1.4 hypothetical protein compare
Atu3287 -0.7 -2.1 thiamine biosynthesis associated protein compare
Atu3012 -0.7 -1.5 hypothetical protein compare
Atu3763 -0.7 -0.8 hypothetical protein compare
Atu2057 -0.7 -1.6 DNA helicase II compare
Atu1744 -0.7 -3.2 nitroreductase family protein compare
Atu5451 -0.7 -0.7 hypothetical protein compare
Atu0434 -0.7 -1.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2267 -0.6 -3.6 hypothetical protein compare
Atu2235 -0.6 -1.7 hypothetical protein compare
Atu0101 -0.6 -1.8 cytochrome c compare
Atu1103 -0.6 -2.5 rRNA-adenine N6,N6-dimethyltransferase compare
Atu3794 -0.6 -4.5 FadR family transcriptional regulator compare
Atu0230 -0.6 -1.4 hypothetical protein compare
Atu0544 -0.6 -1.9 hypothetical protein compare
Atu4346 -0.6 -4.3 hypothetical protein compare
Atu0026 -0.6 -0.8 hypothetical protein compare
Atu0331 -0.6 -1.5 sigma-54 modulation protein compare
Atu2555 -0.6 -2.8 L-lysine 2,3-aminomutase compare
Atu0986 -0.6 -1.0 hypothetical protein compare
Atu1364 -0.6 -2.3 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3997 -0.6 -4.7 biotin synthetase compare
Atu4608 -0.6 -4.5 hypothetical protein compare
Atu2344 -0.6 -1.9 lactoylglutathione lyase compare
Atu6193 -0.6 -3.3 conserved hypothetical protein compare
Atu5517 -0.6 -1.5 hypothetical protein compare
Atu4616 -0.6 -1.1 dTDP-4-dehydrorhamnose reductase compare
Atu8195 -0.6 -1.1 hypothetical protein compare
Atu2104 -0.6 -2.0 hypothetical protein compare
Atu2710 -0.6 -3.4 hypothetical protein compare
Atu5160 -0.6 -1.4 transcriptional regulator protein compare
Atu0690 -0.6 -2.0 hypothetical protein compare
Atu4614 -0.6 -3.5 glycosyltransferase compare
Atu5540 -0.6 -0.4 hypothetical protein compare
Atu0188 -0.5 -2.1 ABC transporter, membrane spanning protein (peptide) compare
Atu3311 -0.5 -4.1 phosphomannose isomerase compare
Atu2441 -0.5 -1.0 RNA methylase compare
Atu1737 -0.5 -1.3 hypothetical protein compare
Atu2772 -0.5 -2.9 Invasion protein A compare
Atu5142 -0.5 -0.7 hypothetical protein compare
Atu4317 -0.5 -1.9 TetR family transcriptional regulator compare
Atu2183 -0.5 -3.1 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu6114 -0.5 -0.7 hypothetical protein compare
Atu0941 -0.5 -0.6 hypothetical protein compare
Atu2433 -0.5 -0.9 hypothetical protein compare
Atu4609 -0.5 -3.6 glycosyltransferase compare
Atu6009 -0.5 -1.1 indole-3-lactate synthase compare
Atu2205 -0.5 -1.9 transcriptional regulator, MarR family compare
Atu0939 -0.5 -0.8 PemI protein compare
Atu2416 -0.5 -3.7 glutamine synthetase compare
Atu0319 -0.5 -0.8 ubiquinone biosynthesis protein compare
Atu4711 -0.5 -2.4 two component sensor kinase compare
Atu0784 -0.5 -1.7 hypothetical protein compare
Atu5443 -0.5 -1.9 TetR family transcriptional regulator compare
Atu3483 -0.5 -2.2 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu4799 -0.5 -2.7 dTDP-4-dehydrorhamnose 3,5-epimerase compare
Atu2789 -0.5 -1.7 hypothetical protein compare
Atu3353 -0.5 -2.7 mannose-1-phosphate guanylyltransferase compare
Atu2472 -0.5 -1.0 hypothetical protein compare
Atu2123 -0.5 -1.4 methylenetetrahydrofolate reductase compare
Atu2808 -0.5 -2.7 cobyric acid synthase compare
Atu0533 -0.5 -1.3 putative inhibitor of septum formation compare
Atu0895 -0.5 -1.4 ABC transporter, substrate binding protein compare
Atu1462 -0.5 -3.4 glycine cleavage system protein P2 compare
Atu1066 -0.5 -2.1 hypothetical protein compare
Atu2207 -0.5 -1.0 two component sensor kinase compare


Specific Phenotypes

For 5 genes in this experiment

For nitrogen source L-Serine in Agrobacterium fabrum C58

For nitrogen source L-Serine across organisms