Experiment set3IT075 for Agrobacterium fabrum C58

Compare to:

L-Threonine nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu1446 -6.0 -4.1 two component response regulator compare
Atu1687 -5.7 -13.0 anthranilate phosphoribosyltransferase compare
Atu1750 -5.6 -6.6 phosphoribosyl c-AMP cyclohydrolase compare
Atu0537 -5.6 -6.6 histidinol dehydrogenase compare
Atu2289 -5.4 -21.7 anthranilate synthase component I and II compare
Atu3740 -5.4 -13.4 fructose bisphosphate aldolase compare
Atu2790 -5.4 -3.1 3-isopropylmalate dehydratase, small subunit compare
Atu0099 -5.3 -14.6 prephenate dehydratase compare
Atu0679 -5.3 -8.8 ATP phosphoribosyltransferase compare
Atu1030 -5.3 -3.6 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1688 -5.3 -8.8 indole-3-glycerol-phosphate synthase compare
Atu0041 -5.2 -3.6 glutamine amidotransferase compare
Atu1464 -5.1 -8.7 glycine cleavage system T protein, aminomethyltransferase compare
Atu1359 -5.0 -2.1 dnaK deletion suppressor protein compare
Atu0678 -4.8 -8.1 histidyl-tRNA synthetase compare
Atu2650 -4.6 -14.5 glycerol-3-phosphate dehydrogenase compare
Atu2791 -4.6 -11.5 3-isopropylmalate dehydrogenase compare
Atu0035 -4.6 -13.4 phosphoenolpyruvate carboxykinase compare
Atu1844 -4.6 -4.4 Phosphoribosylformylglycinamidine synthetase compare
Atu2709 -4.5 -18.8 3-isopropylmalate dehydratase, large subunit compare
Atu2718 -4.3 -10.8 homoserine O-succinyltransferase compare
Atu0400 -4.2 -7.6 orotate phosphoribosyltransferase compare
Atu1462 -4.2 -14.8 glycine cleavage system protein P2 compare
Atu1140 -4.2 -6.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3885 -4.1 -13.1 inositol monophosphatase compare
Atu0017 -4.1 -4.8 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu3469 -4.0 -3.9 phosphoglyceromutase compare
Atu0432 -4.0 -11.7 O-succinylhomoserine sulfhydrylase compare
Atu1463 -4.0 -9.9 glycine cleavage system component H compare
Atu0486 -4.0 -7.0 dihydroorotate dehydrogenase compare
Atu3739 -4.0 -4.5 phosphoglycerate kinase compare
Atu1620 -4.0 -14.9 triosephosphate isomerase compare
Atu2036 -4.0 -15.7 acetolactate synthase III, large subunit compare
Atu2264 -3.9 -14.7 2-isopropylmalate synthase compare
Atu1307 -3.8 -7.5 dihydroorotase compare
Atu4505 -3.8 -11.1 LacI family transcriptional regulator compare
Atu0043 -3.7 -4.4 imidazoleglycerol-phosphate dehydratase compare
Atu1354 -3.7 -2.0 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu0647 -3.7 -10.2 phosphoribosylamine--glycine ligase compare
Atu3755 -3.5 -7.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1075 -3.5 -8.6 amidophosphoribosyltransferase compare
Atu0039 -3.5 -2.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu1308 -3.5 -8.5 aspartate carbamoyl transferase catalytic subunit compare
Atu1141 -3.5 -8.3 Phosphoribosylglycinamide synthetase compare
Atu0399 -3.5 -6.8 dihydroorotase compare
Atu3754 -3.4 -7.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1588 -3.2 -11.4 homoserine dehydrogenase compare
Atu0298 -3.2 -9.8 orotidine 5 compare
Atu0038 -3.1 -3.8 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0030 -3.0 -2.5 phosphocarrier protein HPr compare
Atu1589 -3.0 -10.4 aminotransferase, class I compare
Atu3785 -2.9 -12.4 threonine aldolase conserved
Atu0040 -2.9 -1.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1850 -2.9 -5.1 phosphoribosylformylglycinamidine synthetase II compare
Atu1845 -2.9 -6.5 phosphoribosylformylglycinamidine synthase I compare
Atu0332 -2.8 -10.6 RNA polymerase sigma-54 factor compare
Atu2115 -2.7 -14.8 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu0029 -2.6 -6.5 S-adenosylhomocysteine hydrolase compare
Atu2155 -2.6 -17.1 methionine synthase compare
Atu1445 -2.5 -7.4 two component sensor kinase compare
Atu1686 -2.4 -14.5 peptidyl-prolyl cis-trans isomerse D compare
Atu0346 -2.3 -5.1 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2015 -2.2 -11.0 aminotransferase compare
Atu3731 -2.1 -8.7 5-formyltetrahydrofolate cyclo-ligase compare
Atu3783 -2.0 -13.9 glutamate synthase subunit beta compare
Atu4773 -1.9 -2.6 two component response regulator compare
Atu3784 -1.9 -15.6 glutamate synthase large subunit compare
Atu2795 -1.9 -6.2 cobalamin biosynthetic protein compare
Atu2801 -1.8 -5.1 precorrin-2 C20 methyltransferase compare
Atu3482 -1.8 -7.6 pantoate--beta-alanine ligase compare
Atu0723 -1.8 -2.8 FAD dependent oxidoreductase compare
Atu2793 -1.7 -5.7 cobyrinic acid a,c-diamide synthase compare
Atu3012 -1.7 -2.4 hypothetical protein compare
Atu2802 -1.7 -7.0 precorrin-8X methylmutase compare
Atu0086 -1.7 -1.9 ribosome-binding factor A compare
Atu0876 -1.7 -3.2 superoxide dismutase compare
Atu3707 -1.6 -2.6 phosphoserine aminotransferase compare
Atu2807 -1.6 -5.6 cob(I)alamin adenosyltransferase compare
Atu2803 -1.6 -3.6 Cobalamin biosynthesis associated protein compare
Atu1456 -1.6 -7.5 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1454 -1.6 -6.5 siroheme synthase compare
Atu2808 -1.5 -9.1 cobyric acid synthase compare
Atu1457 -1.5 -1.9 hypothetical protein compare
Atu2640 -1.5 -5.4 hypothetical protein compare
Atu2805 -1.5 -6.9 cobalamin synthesis protein compare
Atu2800 -1.4 -5.4 precorrin-3B C17-methyltransferase compare
Atu2809 -1.4 -6.6 cobalamin biosynthesis protein compare
Atu1891 -1.4 -2.8 cobalamin biosynthesis protein compare
Atu3290 -1.4 -6.5 phosphomethylpyrimidine kinase compare
Atu2548 -1.4 -10.1 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu2799 -1.3 -5.3 precorrin-6x reductase compare
Atu2804 -1.3 -8.4 cobaltochelatase subunit compare
Atu2184 -1.3 -4.6 transcriptional regulator, AsnC family compare
Atu4711 -1.3 -7.5 two component sensor kinase compare
Atu2416 -1.3 -8.0 glutamine synthetase compare
Atu2798 -1.3 -5.0 precorrin-6y methyltransferase compare
Atu1455 -1.2 -5.2 hypothetical protein compare
Atu2163 -1.2 -1.7 hypothetical protein compare
Atu1810 -1.2 -1.7 hypothetical protein compare
Atu2569 -1.2 -8.7 thiamine biosynthesis protein compare
Atu2131 -1.2 -6.2 hypothetical protein compare
Atu0422 -1.1 -1.4 ABC transporter, membrane spanning protein compare
Atu2796 -1.1 -5.9 precorrin-4 C11-methyltransferase compare
Atu1542 -1.1 -5.4 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu1579 -1.1 -7.3 ABC transporter, membrane spanning protein (amino acid) compare
Atu3288 -1.1 -4.8 hydroxyethylthiazole kinase compare
Atu1759 -1.1 -7.2 L-serine dehydratase compare
Atu1572 -1.1 -4.9 hydrolase compare
Atu1577 -1.1 -4.9 ABC transporter, substrate binding protein (amino acid) compare
Atu2439 -1.1 -1.4 hypothetical protein compare
Atu4173 -1.1 -2.6 phosphoenolpyruvate-protein phosphotransferase compare
Atu3483 -1.1 -2.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu3732 -1.1 -5.7 hemolysin compare
Atu1764 -1.1 -7.4 methylenetetrahydrofolate reductase compare
Atu8115 -1.0 -3.9 Hypothetical Protein compare
Atu5164 -1.0 -0.7 type IV secretion protein AvhB3 compare
Atu2758 -1.0 -7.1 ammonium transporter conserved
Atu6098 -1.0 -0.6 transcriptional regulator, HTH family compare
Atu8056 -1.0 -1.3 hypothetical protein compare
Atu6189 -1.0 -0.9 protein secretion chaperone compare
Atu0641 -0.9 -3.0 hypothetical protein compare
Atu3298 -0.9 -7.2 C4-dicarboxylate transporter DctA compare
Atu1774 -0.9 -4.4 ABC transporter, substrate binding protein (peptide) compare
Atu1580 -0.9 -5.5 ABC transporter, nucleotide binding/ATPase protein (amino acid) compare
Atu4166 -0.9 -2.3 UDP-glucose 4-epimerase compare
Atu0079 -0.9 -5.2 Atu0079-1 mutant of pfkB family carbohydrate kinase compare
Atu3121 -0.9 -1.2 cold shock protein compare
Atu3031 -0.9 -1.3 hypothetical protein compare
Atu5517 -0.9 -2.1 hypothetical protein compare
Atu4617 -0.9 -4.6 dTDP-D-glucose-4,6-dehydratase compare
Atu1435 -0.9 -1.8 hypothetical protein compare
Atu0536 -0.9 -3.1 hypothetical protein compare
Atu3289 -0.8 -2.8 thiamine-phosphate pyrophosphorylase compare
Atu2797 -0.8 -2.2 cobalamin biosynthesis protein compare
Atu0817 -0.8 -5.4 sulfate adenylate transferase, subunit 2 compare
Atu2757 -0.8 -3.7 nitrogen regulatory protein PII compare
Atu1801 -0.8 -2.1 hypothetical protein compare
Atu1028 -0.8 -2.0 hypothetical protein compare
Atu0190 -0.8 -3.6 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1578 -0.8 -3.2 ABC transporter, membrane spanning protein (amino acid) compare
Atu3287 -0.8 -2.9 thiamine biosynthesis associated protein compare
Atu2747 -0.8 -5.5 hypothetical protein compare
Atu3763 -0.8 -1.4 hypothetical protein compare
Atu3393 -0.8 -2.8 pseudoazurin compare
Atu5142 -0.8 -0.8 hypothetical protein compare
Atu4613 -0.8 -5.5 glycosyltransferase compare
Atu3297 -0.8 -4.9 two component sensor kinase for C4-dicarboxylate transport compare
Atu4618 -0.8 -6.1 dTDP-rhamnose-3,5-epimerase compare
Atu0291 -0.8 -5.2 hypothetical protein compare
Atu1009 -0.8 -1.7 hypothetical protein compare
Atu8052 -0.8 -0.7 hypothetical protein compare
Atu3296 -0.8 -4.1 two component response regulator for C4-dicarboxylate transport compare
Atu4890 -0.7 -1.3 IS426 transposase compare
Atu5186 -0.7 -1.3 hypothetical protein compare
Atu3075 -0.7 -5.3 TetR family transcriptional regulator compare
Atu0361 -0.7 -2.2 transcriptional regulator compare
Atu1546 -0.7 -2.3 transcriptional regulator, MerR family compare
Atu0818 -0.7 -4.9 phosphoadenosine phosphosulfate reductase compare
Atu2017 -0.7 -1.0 hypothetical protein compare
Atu0846 -0.7 -2.0 transcriptional regulator, MarR family compare
Atu3619 -0.7 -2.5 hypothetical protein compare
Atu8087 -0.7 -0.8 putative peptidoglycan binding protein compare
Atu3353 -0.7 -4.4 mannose-1-phosphate guanylyltransferase compare
Atu0328 -0.7 -3.8 heat-inducible transcription repressor compare
Atu1575 -0.7 -4.5 cystathionine beta lyase compare
Atu4615 -0.7 -4.3 glucose-1-phosphate thymidylyltransferase compare
Atu2267 -0.7 -3.6 hypothetical protein compare
Atu0115 -0.6 -0.8 hypothetical protein compare
Atu4608 -0.6 -5.2 hypothetical protein compare
Atu1846 -0.6 -0.8 hypothetical protein compare
Atu1685 -0.6 -0.8 hypothetical protein compare
Atu2035 -0.6 -3.5 acetolactate synthase, small subunit compare
Atu5148 -0.6 -1.7 hypothetical protein compare
Atu0986 -0.6 -1.0 hypothetical protein compare
Atu0659 -0.6 -2.8 NTP pyrophosphohydrolase, MutT family compare
Atu2192 -0.6 -1.0 hypothetical protein compare
Atu1573 -0.6 -1.4 hypothetical protein compare
Atu5046 -0.6 -1.5 hypothetical protein compare
Atu0816 -0.6 -4.8 sulfate adenylate transferase, subunit 1 compare
Atu1163 -0.6 -1.6 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2554 -0.6 -1.4 lysyl-tRNA synthetase compare
Atu4317 -0.6 -1.9 TetR family transcriptional regulator compare
Atu8088 -0.6 -1.6 hypothetical protein compare
Atu0357 -0.6 -3.4 phosphate starvation inducible protein compare
Atu0434 -0.6 -1.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2239 -0.6 -2.2 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu2433 -0.6 -0.9 hypothetical protein compare
Atu4391 -0.6 -2.2 nitric oxide reductase NorE protein compare
Atu0803 -0.6 -4.8 pyruvate,orthophosphate dikinase compare
Atu8150 -0.6 -2.6 hypothetical protein compare
Atu4614 -0.6 -3.0 glycosyltransferase compare
Atu2694 -0.6 -1.3 hypothetical protein compare
Atu2183 -0.6 -3.5 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4217 -0.6 -1.3 TetR family transcriptional regulator compare
Atu0303 -0.6 -2.3 hypothetical protein compare
Atu1444 -0.6 -2.5 nitrogen regulation protein compare
Atu3706 -0.5 -3.2 D-3-phosphoglycerate dehydrogenase compare
Atu1705 -0.5 -2.9 SEC-independent protein translocase protein compare
Atu2236 -0.5 -1.7 adenine phosphoribosyltransferase compare
Atu2028 -0.5 -1.7 transcriptional regulator, ArsR family compare


Specific Phenotypes

For 5 genes in this experiment

For nitrogen source L-Threonine in Agrobacterium fabrum C58

For nitrogen source L-Threonine across organisms