Experiment set3IT072 for Agrobacterium fabrum C58

Compare to:

L-Phenylalanine nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu4616 -5.4 -3.7 dTDP-4-dehydrorhamnose reductase compare
Atu0041 -5.4 -3.7 glutamine amidotransferase compare
Atu3706 -4.8 -12.4 D-3-phosphoglycerate dehydrogenase compare
Atu1687 -4.5 -10.5 anthranilate phosphoribosyltransferase compare
Atu3707 -4.2 -5.2 phosphoserine aminotransferase compare
Atu2040 -4.2 -7.2 phosphoserine phosphatase compare
Atu0043 -4.1 -4.4 imidazoleglycerol-phosphate dehydratase compare
Atu0537 -4.0 -8.7 histidinol dehydrogenase compare
Atu0679 -3.9 -6.8 ATP phosphoribosyltransferase compare
Atu4613 -3.9 -16.3 glycosyltransferase compare
Atu0678 -3.9 -8.7 histidyl-tRNA synthetase compare
Atu1750 -3.8 -10.1 phosphoribosyl c-AMP cyclohydrolase compare
Atu2183 -3.8 -12.2 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu1688 -3.8 -11.9 indole-3-glycerol-phosphate synthase compare
Atu3740 -3.8 -13.6 fructose bisphosphate aldolase compare
Atu4617 -3.8 -11.0 dTDP-D-glucose-4,6-dehydratase compare
Atu4614 -3.7 -10.7 glycosyltransferase compare
Atu3469 -3.7 -4.3 phosphoglyceromutase compare
Atu3353 -3.6 -15.2 mannose-1-phosphate guanylyltransferase compare
Atu0035 -3.6 -11.4 phosphoenolpyruvate carboxykinase compare
Atu4615 -3.6 -13.9 glucose-1-phosphate thymidylyltransferase compare
Atu4618 -3.5 -14.8 dTDP-rhamnose-3,5-epimerase compare
Atu3311 -3.5 -15.7 phosphomannose isomerase compare
Atu4166 -3.5 -4.5 UDP-glucose 4-epimerase compare
Atu1030 -3.5 -2.0 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0017 -3.4 -4.0 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2790 -3.3 -4.2 3-isopropylmalate dehydratase, small subunit compare
Atu4505 -3.1 -11.9 LacI family transcriptional regulator compare
Atu0040 -3.0 -1.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3739 -2.9 -2.9 phosphoglycerate kinase compare
Atu1359 -2.9 -2.0 dnaK deletion suppressor protein compare
Atu0039 -2.9 -3.6 imidazoleglycerol-phosphate synthase cyclase compare
Atu2791 -2.8 -10.3 3-isopropylmalate dehydrogenase compare
Atu1844 -2.8 -5.0 Phosphoribosylformylglycinamidine synthetase compare
Atu2650 -2.7 -12.6 glycerol-3-phosphate dehydrogenase compare
Atu0332 -2.7 -14.3 RNA polymerase sigma-54 factor compare
Atu1307 -2.7 -9.0 dihydroorotase compare
Atu1620 -2.7 -14.2 triosephosphate isomerase compare
Atu2709 -2.6 -16.7 3-isopropylmalate dehydratase, large subunit compare
Atu0400 -2.6 -6.5 orotate phosphoribosyltransferase compare
Atu0432 -2.5 -9.6 O-succinylhomoserine sulfhydrylase compare
Atu1845 -2.5 -4.3 phosphoribosylformylglycinamidine synthase I compare
Atu0486 -2.4 -8.0 dihydroorotate dehydrogenase compare
Atu1850 -2.4 -5.5 phosphoribosylformylglycinamidine synthetase II compare
Atu2289 -2.4 -16.0 anthranilate synthase component I and II compare
Atu1446 -2.3 -4.6 two component response regulator compare
Atu2036 -2.3 -12.9 acetolactate synthase III, large subunit compare
Atu0038 -2.3 -6.4 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1308 -2.2 -7.5 aspartate carbamoyl transferase catalytic subunit compare
Atu2264 -2.2 -11.5 2-isopropylmalate synthase compare
Atu0399 -2.2 -7.2 dihydroorotase compare
Atu1075 -2.1 -6.8 amidophosphoribosyltransferase compare
Atu4711 -2.0 -8.6 two component sensor kinase compare
Atu0346 -2.0 -5.2 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1140 -2.0 -5.9 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3754 -2.0 -6.9 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3012 -1.9 -2.8 hypothetical protein compare
Atu1588 -1.9 -9.1 homoserine dehydrogenase compare
Atu3755 -1.9 -5.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0030 -1.9 -2.2 phosphocarrier protein HPr compare
Atu3885 -1.9 -10.6 inositol monophosphatase compare
Atu1141 -1.8 -5.9 Phosphoribosylglycinamide synthetase compare
Atu2718 -1.8 -6.1 homoserine O-succinyltransferase compare
Atu1205 -1.8 -10.8 threonine dehydratase compare
Atu0298 -1.8 -7.6 orotidine 5 compare
Atu0647 -1.7 -7.9 phosphoribosylamine--glycine ligase compare
Atu4773 -1.7 -2.8 two component response regulator compare
Atu2747 -1.7 -10.0 hypothetical protein compare
Atu1028 -1.6 -3.9 hypothetical protein compare
Atu1445 -1.6 -6.0 two component sensor kinase compare
Atu2640 -1.6 -5.3 hypothetical protein compare
Atu3908 -1.5 -11.0 GntR family transcriptional regulator compare
Atu2207 -1.5 -3.2 two component sensor kinase compare
Atu2379 -1.5 -8.4 phosphomannomutase compare
Atu2115 -1.4 -9.3 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu8099 -1.4 -1.5 hypothetical protein compare
Atu0422 -1.4 -2.0 ABC transporter, membrane spanning protein compare
Atu4609 -1.4 -9.7 glycosyltransferase compare
Atu0029 -1.3 -5.6 S-adenosylhomocysteine hydrolase compare
Atu5115 -1.3 -1.0 hypothetical protein compare
Atu2427 -1.3 -7.3 ABC transporter, membrane spanning protein compare
Atu3293 -1.3 -5.1 D-amino acid dehydrogenase small subunit compare
Atu3912 -1.3 -6.3 hypothetical protein compare
Atu4608 -1.3 -8.7 hypothetical protein compare
Atu1364 -1.2 -6.1 ATP-dependent Clp protease, ATP-binding subunit compare
Atu4226 -1.2 -7.6 transcriptional regulator compare
Atu4890 -1.2 -2.0 IS426 transposase compare
Atu3298 -1.2 -8.1 C4-dicarboxylate transporter DctA compare
Atu2433 -1.2 -1.7 hypothetical protein compare
Atu6098 -1.2 -0.5 transcriptional regulator, HTH family compare
Atu1686 -1.2 -8.6 peptidyl-prolyl cis-trans isomerse D compare
Atu0361 -1.2 -2.1 transcriptional regulator compare
Atu6107 -1.2 -1.4 hypothetical protein compare
Atu5494 -1.2 -2.6 hypothetical protein compare
Atu2376 -1.2 -1.7 hypothetical protein compare
Atu1455 -1.2 -2.0 hypothetical protein compare
Atu6189 -1.1 -0.7 protein secretion chaperone compare
Atu8056 -1.1 -1.4 hypothetical protein compare
Atu3910 -1.1 -3.5 LamB/YcsF family protein compare
Atu1456 -1.1 -6.1 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1462 -1.1 -8.0 glycine cleavage system protein P2 compare
Atu2439 -1.1 -1.8 hypothetical protein compare
Atu0876 -1.1 -2.6 superoxide dismutase compare
Atu0529 -1.1 -7.0 aspartate transaminase compare
Atu3296 -1.1 -6.6 two component response regulator for C4-dicarboxylate transport compare
Atu2425 -1.0 -7.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu1463 -1.0 -4.5 glycine cleavage system component H compare
Atu2155 -1.0 -8.1 methionine synthase compare
Atu1464 -1.0 -5.0 glycine cleavage system T protein, aminomethyltransferase compare
Atu6186 -1.0 -1.6 virA/G regulated protein compare
Atu2424 -1.0 -4.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu4346 -1.0 -5.2 hypothetical protein compare
Atu4702 -1.0 -4.2 GntR family transcriptional regulator compare
Atu1163 -1.0 -2.2 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu1327 -1.0 -3.1 NADH-ubiquinone oxidoreductase compare
Atu5173 -0.9 -1.0 dehydrogenase compare
Atu0225 -0.9 -1.0 hypothetical protein compare
Atu6146 -0.9 -2.9 conserved hypothetical protein compare
Atu2787 -0.9 -1.1 hypothetical protein compare
Atu3297 -0.9 -6.7 two component sensor kinase for C4-dicarboxylate transport compare
Atu3016 -0.9 -4.5 phosphoglyceromutase compare
Atu3032 -0.9 -2.0 hypothetical protein compare
Atu1503 -0.9 -1.3 hypothetical protein compare
Atu3468 -0.9 -0.9 hypothetical protein compare
Atu2426 -0.9 -6.1 ABC transporter, membrane spanning protein (branched chain amino acid) compare
Atu0190 -0.9 -3.9 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu5065 -0.9 -3.2 non-heme chloroperoxidase compare
Atu0769 -0.9 -1.5 protoheme IX farnesyltransferase compare
Atu2384 -0.9 -4.5 transcriptional regulator, TetR family compare
Atu0986 -0.9 -1.3 hypothetical protein compare
Atu5517 -0.9 -1.5 hypothetical protein compare
Atu5162 -0.9 -3.1 type IV secretion protein AvhB1 compare
Atu1774 -0.8 -5.0 ABC transporter, substrate binding protein (peptide) compare
Atu2123 -0.8 -3.5 methylenetetrahydrofolate reductase compare
Atu8093 -0.8 -3.4 hypothetical protein compare
Atu2800 -0.8 -2.4 precorrin-3B C17-methyltransferase compare
Atu0723 -0.8 -1.6 FAD dependent oxidoreductase compare
Atu4896 -0.8 -1.1 acetyltransferase compare
Atu3663 -0.8 -1.3 hypothetical protein compare
Atu3008 -0.8 -0.8 hypothetical protein compare
Atu4869 -0.8 -3.2 hypothetical protein compare
Atu8138 -0.8 -1.4 hypothetical protein compare
Atu6020 -0.8 -1.8 conserved hypothetical protein compare
Atu4610 -0.8 -5.3 sugar nucleotide epimerase/dehydratase compare
Atu4819 -0.8 -2.9 hypothetical protein compare
Atu6114 -0.8 -0.9 hypothetical protein compare
Atu1714 -0.7 -1.4 exonuclease III compare
Atu5502 -0.7 -1.8 hypothetical protein compare
Atu4888 -0.7 -3.2 hypothetical protein compare
Atu8118 -0.7 -3.8 putative universal stress protein compare
Atu3015 -0.7 -2.7 hypothetical protein compare
Atu1422 -0.7 -5.3 transcriptional regulator, MarR family compare
Atu2125 -0.7 -1.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu3024 -0.7 -4.7 sugar ABC transporter permease compare
Atu5493 -0.7 -1.9 hypothetical protein compare
Atu1454 -0.7 -3.5 siroheme synthase compare
Atu1589 -0.7 -3.2 aminotransferase, class I compare
Atu8158 -0.7 -1.9 hypothetical protein compare
Atu3572 -0.7 -3.5 transcriptional regulator compare
Atu5148 -0.7 -1.1 hypothetical protein compare
Atu1527 -0.7 -2.7 nitrogen fixation protein FixS compare
Atu5429 -0.7 -1.4 transcriptional regulator compare
Atu3075 -0.7 -3.2 TetR family transcriptional regulator compare
Atu3913 -0.7 -3.8 biotin carboxylase compare
Atu1848 -0.7 -2.8 transcriptional regulator, GntR family compare
Atu0846 -0.7 -1.5 transcriptional regulator, MarR family compare
Atu3028 -0.7 -4.4 hypothetical protein compare
Atu3029 -0.6 -3.8 glucarate dehydratase compare
Atu4870 -0.6 -4.9 NADP-dependent quinone oxidoreductase compare
Atu0149 -0.6 -1.7 enoyl-(acyl-carrier-protein) reductase compare
Atu5158 -0.6 -1.5 hypothetical protein compare
Atu6156 -0.6 -1.6 virA/G regulated gene compare
Atu3730 -0.6 -1.1 hypothetical protein compare
Atu4887 -0.6 -2.3 hypothetical protein compare
Atu4173 -0.6 -1.8 phosphoenolpyruvate-protein phosphotransferase compare
Atu0536 -0.6 -3.4 hypothetical protein compare
Atu1219 -0.6 -0.9 hypothetical protein compare
Atu3026 -0.6 -3.8 short chain dehydrogenase compare
Atu3413 -0.6 -1.6 AsnC family transcriptional regulator compare
Atu4867 -0.6 -3.7 hypothetical protein compare
Atu5486 -0.6 -1.1 hypothetical protein compare
Atu4317 -0.6 -2.1 TetR family transcriptional regulator compare
Atu1581 -0.6 -1.6 hypothetical protein compare
Atu4837 -0.6 -3.3 hypothetical protein compare
Atu2832 -0.6 -2.7 tRNA modification GTPase compare
Atu2422 -0.6 -3.9 ABC transporter, substrate binding protein (amino acid) compare
Atu4881 -0.6 -3.1 hypothetical protein compare
Atu3799 -0.6 -3.4 GntR family transcriptional regulator compare
Atu5519 -0.6 -1.4 hypothetical protein compare
Atu3005 -0.6 -0.7 hypothetical protein compare
Atu1149 -0.6 -1.1 adenylate cyclase compare
Atu1734 -0.6 -1.5 hypothetical protein compare
Atu3030 -0.6 -2.4 hypothetical protein compare
Atu2442 -0.6 -1.1 hypothetical protein compare
Atu0971 -0.6 -2.4 two component sensor kinase compare
Atu0205 -0.6 -4.5 methylmalonate-semialdehyde dehydrogenase compare
Atu5513 -0.6 -0.6 cold shock protein compare
Atu2678 -0.6 -2.9 2'-5' RNA ligase compare
Atu2380 -0.6 -1.7 hypothetical protein compare
Atu3010 -0.6 -3.3 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For nitrogen source L-Phenylalanine in Agrobacterium fabrum C58

For nitrogen source L-Phenylalanine across organisms