Experiment set3IT068 for Agrobacterium fabrum C58

Compare to:

L-Proline nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu1844 -7.0 -4.8 Phosphoribosylformylglycinamidine synthetase compare
Atu0099 -6.5 -11.7 prephenate dehydratase compare
Atu2791 -6.5 -8.9 3-isopropylmalate dehydrogenase compare
Atu0678 -6.3 -4.4 histidyl-tRNA synthetase compare
Atu3707 -6.3 -4.4 phosphoserine aminotransferase compare
Atu0038 -6.2 -6.4 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2289 -5.8 -19.8 anthranilate synthase component I and II compare
Atu0035 -5.8 -12.4 phosphoenolpyruvate carboxykinase compare
Atu1687 -5.8 -10.6 anthranilate phosphoribosyltransferase compare
Atu0679 -5.7 -6.7 ATP phosphoribosyltransferase compare
Atu0432 -5.5 -11.7 O-succinylhomoserine sulfhydrylase compare
Atu3739 -5.5 -3.0 phosphoglycerate kinase compare
Atu2040 -5.4 -6.4 phosphoserine phosphatase compare
Atu0043 -5.3 -3.7 imidazoleglycerol-phosphate dehydratase compare
Atu2790 -5.3 -3.1 3-isopropylmalate dehydratase, small subunit compare
Atu2709 -5.3 -18.8 3-isopropylmalate dehydratase, large subunit compare
Atu1030 -5.3 -3.6 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1750 -5.2 -5.9 phosphoribosyl c-AMP cyclohydrolase compare
Atu0346 -5.2 -5.8 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2264 -5.2 -15.1 2-isopropylmalate synthase compare
Atu3706 -5.1 -10.3 D-3-phosphoglycerate dehydrogenase compare
Atu3740 -5.1 -13.1 fructose bisphosphate aldolase compare
Atu0537 -5.1 -7.7 histidinol dehydrogenase compare
Atu4505 -5.0 -11.1 LacI family transcriptional regulator compare
Atu0017 -5.0 -4.8 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu4157 -4.9 -26.2 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase conserved
Atu3469 -4.9 -3.4 phosphoglyceromutase compare
Atu2718 -4.9 -10.2 homoserine O-succinyltransferase compare
Atu1620 -4.8 -13.5 triosephosphate isomerase compare
Atu1688 -4.6 -8.3 indole-3-glycerol-phosphate synthase compare
Atu2036 -4.6 -17.2 acetolactate synthase III, large subunit compare
Atu0399 -4.5 -9.2 dihydroorotase compare
Atu0039 -4.5 -3.1 imidazoleglycerol-phosphate synthase cyclase compare
Atu3754 -4.5 -6.3 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1307 -4.5 -8.8 dihydroorotase compare
Atu1588 -4.5 -10.7 homoserine dehydrogenase compare
Atu1308 -4.4 -8.8 aspartate carbamoyl transferase catalytic subunit compare
Atu1140 -4.3 -6.9 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3885 -4.3 -9.8 inositol monophosphatase compare
Atu0041 -4.2 -3.3 glutamine amidotransferase compare
Atu1845 -4.1 -5.4 phosphoribosylformylglycinamidine synthase I compare
Atu1075 -4.1 -8.0 amidophosphoribosyltransferase compare
Atu2115 -4.1 -14.7 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu3755 -4.1 -6.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1850 -4.0 -5.7 phosphoribosylformylglycinamidine synthetase II compare
Atu0400 -4.0 -6.9 orotate phosphoribosyltransferase compare
Atu2650 -4.0 -12.2 glycerol-3-phosphate dehydrogenase compare
Atu1446 -3.9 -4.6 two component response regulator compare
Atu1141 -3.9 -8.9 Phosphoribosylglycinamide synthetase compare
Atu0298 -3.9 -8.8 orotidine 5 compare
Atu1205 -3.9 -16.7 threonine dehydratase compare
Atu0486 -3.8 -4.4 dihydroorotate dehydrogenase compare
Atu2015 -3.8 -13.7 aminotransferase compare
Atu4159 -3.7 -6.6 AsnC family transcriptional regulator conserved
Atu1686 -3.7 -16.1 peptidyl-prolyl cis-trans isomerse D compare
Atu1577 -3.5 -8.2 ABC transporter, substrate binding protein (amino acid) compare
Atu0030 -3.4 -2.5 phosphocarrier protein HPr compare
Atu1685 -3.3 -1.9 hypothetical protein compare
Atu0647 -3.3 -6.7 phosphoribosylamine--glycine ligase compare
Atu1580 -3.1 -11.8 ABC transporter, nucleotide binding/ATPase protein (amino acid) compare
Atu2747 -3.0 -14.3 hypothetical protein compare
Atu1589 -3.0 -9.2 aminotransferase, class I compare
Atu0040 -2.9 -1.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1578 -2.9 -11.0 ABC transporter, membrane spanning protein (amino acid) compare
Atu1456 -2.7 -9.8 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu3482 -2.7 -6.3 pantoate--beta-alanine ligase compare
Atu1454 -2.6 -9.9 siroheme synthase compare
Atu1579 -2.4 -10.5 ABC transporter, membrane spanning protein (amino acid) compare
Atu4173 -2.3 -3.9 phosphoenolpyruvate-protein phosphotransferase compare
Atu3483 -2.3 -5.3 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu2155 -2.2 -15.6 methionine synthase compare
Atu3731 -2.1 -6.7 5-formyltetrahydrofolate cyclo-ligase compare
Atu4096 -2.1 -9.4 nicotinate-nucleotide pyrophosphorylase compare
Atu2548 -2.0 -10.8 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0029 -2.0 -6.0 S-adenosylhomocysteine hydrolase compare
Atu1455 -2.0 -3.4 hypothetical protein compare
Atu5430 -2.0 -1.3 hypothetical protein compare
Atu1445 -2.0 -7.8 two component sensor kinase compare
Atu0031 -1.9 -2.0 PTS system, IIA component compare
Atu0876 -1.9 -3.4 superoxide dismutase compare
Atu0641 -1.9 -4.5 hypothetical protein compare
Atu2766 -1.8 -14.3 NAD-glutamate dehydrogenase compare
Atu8115 -1.8 -4.7 Hypothetical Protein compare
Atu4098 -1.7 -8.7 quinolinate synthetase compare
Atu0769 -1.7 -2.6 protoheme IX farnesyltransferase compare
Atu1457 -1.7 -1.5 hypothetical protein compare
Atu1359 -1.6 -1.5 dnaK deletion suppressor protein compare
Atu1464 -1.6 -8.1 glycine cleavage system T protein, aminomethyltransferase compare
Atu1748 -1.6 -9.8 NIFU-like protein compare
Atu2424 -1.4 -6.9 ABC transporter, nucleotide binding/ATPase protein conserved
Atu1444 -1.4 -6.5 nitrogen regulation protein compare
Atu3290 -1.3 -6.8 phosphomethylpyrimidine kinase compare
Atu4711 -1.3 -4.8 two component sensor kinase compare
Atu6114 -1.2 -1.3 hypothetical protein compare
Atu5451 -1.2 -0.9 hypothetical protein compare
Atu2205 -1.2 -4.9 transcriptional regulator, MarR family compare
Atu1462 -1.2 -7.2 glycine cleavage system protein P2 compare
Atu0723 -1.2 -2.0 FAD dependent oxidoreductase compare
Atu1463 -1.1 -6.3 glycine cleavage system component H compare
Atu4166 -1.1 -1.9 UDP-glucose 4-epimerase compare
Atu2425 -1.1 -7.2 ABC transporter, nucleotide binding/ATPase protein conserved
Atu2569 -1.0 -7.3 thiamine biosynthesis protein compare
Atu3429 -1.0 -1.5 hypothetical protein compare
Atu1163 -1.0 -2.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu4613 -1.0 -7.3 glycosyltransferase compare
Atu5501 -1.0 -1.8 hypothetical protein compare
Atu4097 -1.0 -5.9 L-aspartate oxidase compare
Atu5155 -1.0 -2.4 MarR family transcriptional regulator compare
Atu1339 -0.9 -2.9 ribonuclease E compare
Atu2376 -0.9 -0.7 hypothetical protein compare
Atu4133 -0.9 -1.3 hypothetical protein compare
Atu8056 -0.9 -1.1 hypothetical protein compare
Atu2428 -0.9 -5.3 exopolysaccharide production protein PssB compare
Atu3297 -0.9 -6.0 two component sensor kinase for C4-dicarboxylate transport compare
Atu0434 -0.8 -1.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu8087 -0.8 -1.0 putative peptidoglycan binding protein compare
Atu0184 -0.8 -2.3 glucokinase compare
Atu2426 -0.8 -5.1 ABC transporter, membrane spanning protein (branched chain amino acid) compare
Atu1754 -0.8 -1.6 hypothetical protein compare
Atu2427 -0.8 -5.4 ABC transporter, membrane spanning protein compare
Atu0690 -0.8 -2.5 hypothetical protein compare
Atu1848 -0.8 -3.0 transcriptional regulator, GntR family compare
Atu4217 -0.8 -1.4 TetR family transcriptional regulator compare
Atu2020 -0.8 -2.0 transcriptional regulator, TetR family compare
Atu0142 -0.8 -2.5 cytochrome o ubiquinol oxidase subunit II compare
Atu0971 -0.8 -2.4 two component sensor kinase compare
Atu0795 -0.8 -1.7 hypothetical protein compare
Atu1364 -0.8 -3.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3298 -0.8 -5.1 C4-dicarboxylate transporter DctA compare
Atu3288 -0.8 -3.4 hydroxyethylthiazole kinase compare
Atu3999 -0.8 -1.8 dithiobiotin synthetase compare
Atu5010 -0.8 -1.4 hypothetical protein compare
Atu0941 -0.8 -0.9 hypothetical protein compare
Atu0332 -0.7 -3.6 RNA polymerase sigma-54 factor compare
Atu2123 -0.7 -2.6 methylenetetrahydrofolate reductase compare
Atu8162 -0.7 -0.8 hypothetical protein compare
Atu0331 -0.7 -1.2 sigma-54 modulation protein compare
Atu8138 -0.7 -1.3 hypothetical protein compare
Atu3759 -0.7 -1.3 hypothetical protein compare
Atu3009 -0.7 -0.9 exopolysaccharide production protein compare
Atu3997 -0.7 -5.3 biotin synthetase compare
Atu1219 -0.7 -0.9 hypothetical protein compare
Atu5034 -0.7 -1.0 hypothetical protein compare
Atu1009 -0.7 -1.5 hypothetical protein compare
Atu2207 -0.7 -2.0 two component sensor kinase compare
Atu0533 -0.7 -1.1 putative inhibitor of septum formation compare
Atu0845 -0.7 -2.2 hypothetical protein compare
Atu3296 -0.7 -3.8 two component response regulator for C4-dicarboxylate transport compare
Atu2640 -0.7 -2.7 hypothetical protein compare
Atu4896 -0.7 -1.2 acetyltransferase compare
Atu0300 -0.7 -3.5 methyltransferase compare
Atu6159 -0.6 -1.8 hypothetical protein compare
Atu2832 -0.6 -2.3 tRNA modification GTPase compare
Atu3287 -0.6 -2.3 thiamine biosynthesis associated protein compare
Atu0837 -0.6 -2.8 transcriptional regulator, MarR family compare
Atu4614 -0.6 -3.1 glycosyltransferase compare
Atu0228 -0.6 -1.7 hypothetical protein compare
Atu2083 -0.6 -2.1 DNA repair protein RecN compare
Atu3763 -0.6 -1.2 hypothetical protein compare
Atu0025 -0.6 -1.3 hypothetical protein compare
Atu1734 -0.6 -1.5 hypothetical protein compare
Atu1810 -0.6 -0.8 hypothetical protein compare
Atu1184 -0.6 -1.9 hypothetical protein compare
Atu2237 -0.6 -2.9 cytochrome c1 compare
Atu3518 -0.6 -4.1 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu8203 -0.6 -1.1 hypothetical protein compare
Atu4873 -0.6 -3.3 TetR family transcriptional regulator compare
Atu0702 -0.6 -1.5 calcium-binding protein, regucalcin compare
Atu2728 -0.6 -2.5 beta (1-->2) glucan export ATP-binding protein compare
Atu1774 -0.6 -3.4 ABC transporter, substrate binding protein (peptide) compare
Atu0636 -0.6 -3.6 hypothetical protein compare
Atu8052 -0.6 -0.7 hypothetical protein compare
Atu2809 -0.6 -3.5 cobalamin biosynthesis protein compare
Atu2058 -0.6 -1.5 hypothetical protein compare
Atu0836 -0.6 -1.7 Glutathione-S-transferase compare
Atu2456 -0.6 -1.9 lactoylglutathione lyase compare
Atu3289 -0.5 -1.6 thiamine-phosphate pyrophosphorylase compare
Atu2787 -0.5 -0.6 hypothetical protein compare
Atu6020 -0.5 -1.6 conserved hypothetical protein compare
Atu4702 -0.5 -3.2 GntR family transcriptional regulator compare
Atu4418 -0.5 -2.9 glutaryl-CoA dehydrogenase compare
Atu0986 -0.5 -0.9 hypothetical protein compare
Atu2273 -0.5 -1.9 hypothetical protein compare
Atu4615 -0.5 -2.9 glucose-1-phosphate thymidylyltransferase compare
Atu1439 -0.5 -1.3 hypothetical protein compare
Atu3663 -0.5 -0.8 hypothetical protein compare
Atu4618 -0.5 -3.1 dTDP-rhamnose-3,5-epimerase compare
Atu0086 -0.5 -0.7 ribosome-binding factor A compare
Atu3908 -0.5 -3.6 GntR family transcriptional regulator compare
Atu0972 -0.5 -2.6 lipA protein compare
Atu4617 -0.5 -3.5 dTDP-D-glucose-4,6-dehydratase compare
Atu1714 -0.5 -1.0 exonuclease III compare
Atu1782 -0.5 -2.0 hypothetical protein compare
Atu3864 -0.5 -2.2 hypothetical protein compare
Atu0361 -0.5 -1.6 transcriptional regulator compare
Atu5462 -0.5 -1.6 ABC transporter nucleotide binding/ATPase compare
Atu1028 -0.5 -0.9 hypothetical protein compare
Atu2783 -0.5 -2.1 acetyltransferase compare
Atu3485 -0.5 -2.9 short chain dehydrogenase compare
Atu0050 -0.5 -2.6 two component response regulator compare


Specific Phenotypes

For 10 genes in this experiment

For nitrogen source L-Proline in Agrobacterium fabrum C58

For nitrogen source L-Proline across organisms