Experiment set3IT062 for Agrobacterium fabrum C58

Compare to:

L-Isoleucine nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu1359 -5.1 -2.1 dnaK deletion suppressor protein compare
Atu3707 -4.8 -5.5 phosphoserine aminotransferase compare
Atu2040 -4.5 -6.8 phosphoserine phosphatase compare
Atu0041 -4.5 -4.3 glutamine amidotransferase compare
Atu0679 -4.4 -7.5 ATP phosphoribosyltransferase compare
Atu0043 -4.1 -4.5 imidazoleglycerol-phosphate dehydratase compare
Atu0678 -4.1 -9.8 histidyl-tRNA synthetase compare
Atu1750 -4.0 -8.0 phosphoribosyl c-AMP cyclohydrolase compare
Atu3706 -3.7 -12.7 D-3-phosphoglycerate dehydrogenase compare
Atu0039 -3.6 -3.1 imidazoleglycerol-phosphate synthase cyclase compare
Atu1687 -3.6 -13.3 anthranilate phosphoribosyltransferase compare
Atu0537 -3.6 -9.0 histidinol dehydrogenase compare
Atu0035 -3.4 -11.8 phosphoenolpyruvate carboxykinase compare
Atu0017 -3.3 -4.5 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1030 -3.2 -2.7 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu4773 -3.0 -3.3 two component response regulator compare
Atu0040 -3.0 -1.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu2709 -3.0 -18.1 3-isopropylmalate dehydratase, large subunit compare
Atu2791 -2.9 -11.7 3-isopropylmalate dehydrogenase compare
Atu2790 -2.9 -4.1 3-isopropylmalate dehydratase, small subunit compare
Atu1308 -2.8 -7.2 aspartate carbamoyl transferase catalytic subunit compare
Atu1688 -2.8 -8.0 indole-3-glycerol-phosphate synthase compare
Atu2289 -2.7 -15.7 anthranilate synthase component I and II compare
Atu0038 -2.6 -6.5 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2264 -2.4 -13.5 2-isopropylmalate synthase compare
Atu1307 -2.3 -9.3 dihydroorotase compare
Atu0400 -2.3 -5.2 orotate phosphoribosyltransferase compare
Atu2650 -2.3 -14.1 glycerol-3-phosphate dehydrogenase compare
Atu3469 -2.3 -4.3 phosphoglyceromutase compare
Atu2036 -2.3 -13.5 acetolactate synthase III, large subunit compare
Atu0399 -2.3 -7.7 dihydroorotase compare
Atu1620 -2.2 -14.2 triosephosphate isomerase compare
Atu3740 -2.1 -9.9 fructose bisphosphate aldolase compare
Atu3739 -2.1 -2.5 phosphoglycerate kinase compare
Atu0647 -2.0 -7.7 phosphoribosylamine--glycine ligase compare
Atu0486 -2.0 -7.3 dihydroorotate dehydrogenase compare
Atu1850 -2.0 -5.1 phosphoribosylformylglycinamidine synthetase II compare
Atu0298 -2.0 -7.3 orotidine 5 compare
Atu4505 -1.9 -10.6 LacI family transcriptional regulator compare
Atu1446 -1.9 -2.4 two component response regulator compare
Atu0332 -1.9 -9.6 RNA polymerase sigma-54 factor compare
Atu6098 -1.8 -0.8 transcriptional regulator, HTH family compare
Atu8054 -1.8 -0.8 hypothetical protein compare
Atu1075 -1.8 -6.4 amidophosphoribosyltransferase compare
Atu2718 -1.7 -8.2 homoserine O-succinyltransferase compare
Atu0432 -1.7 -7.4 O-succinylhomoserine sulfhydrylase compare
Atu1844 -1.6 -4.7 Phosphoribosylformylglycinamidine synthetase compare
Atu1140 -1.6 -7.1 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu4166 -1.6 -3.8 UDP-glucose 4-epimerase compare
Atu3754 -1.6 -5.9 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2015 -1.6 -10.3 aminotransferase compare
Atu1845 -1.5 -4.2 phosphoribosylformylglycinamidine synthase I compare
Atu1141 -1.4 -4.5 Phosphoribosylglycinamide synthetase compare
Atu3755 -1.3 -5.4 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2684 -1.3 -1.7 hypothetical protein compare
Atu3885 -1.3 -8.1 inositol monophosphatase compare
Atu4711 -1.2 -7.4 two component sensor kinase compare
Atu3121 -1.2 -1.5 cold shock protein compare
Atu4616 -1.2 -2.0 dTDP-4-dehydrorhamnose reductase compare
Atu0490 -1.2 -7.2 hypothetical protein compare
Atu5158 -1.2 -2.4 hypothetical protein compare
Atu2155 -1.2 -9.6 methionine synthase compare
Atu2207 -1.1 -3.3 two component sensor kinase compare
Atu1163 -1.1 -2.6 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2183 -1.1 -6.4 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0871 -1.1 -6.8 branched-chain-amino-acid aminotransferase conserved
Atu0769 -1.1 -1.8 protoheme IX farnesyltransferase compare
Atu8087 -1.1 -1.4 putative peptidoglycan binding protein compare
Atu3353 -1.1 -6.6 mannose-1-phosphate guanylyltransferase compare
Atu2115 -1.1 -6.3 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu1445 -1.0 -5.3 two component sensor kinase compare
Atu4617 -1.0 -7.0 dTDP-D-glucose-4,6-dehydratase compare
Atu5540 -1.0 -0.6 hypothetical protein compare
Atu1588 -1.0 -6.2 homoserine dehydrogenase compare
Atu2640 -1.0 -3.7 hypothetical protein compare
Atu2163 -0.9 -1.6 hypothetical protein compare
Atu4613 -0.9 -7.0 glycosyltransferase compare
Atu4217 -0.9 -1.5 TetR family transcriptional regulator compare
Atu3311 -0.9 -7.6 phosphomannose isomerase compare
Atu2376 -0.9 -0.7 hypothetical protein compare
Atu0525 -0.9 -3.5 transcriptional regulator, LuxR family compare
Atu0190 -0.8 -4.5 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu4614 -0.8 -4.7 glycosyltransferase compare
Atu3297 -0.8 -6.9 two component sensor kinase for C4-dicarboxylate transport compare
Atu0837 -0.8 -3.6 transcriptional regulator, MarR family compare
Atu4618 -0.8 -5.6 dTDP-rhamnose-3,5-epimerase compare
Atu5186 -0.8 -1.2 hypothetical protein compare
Atu4615 -0.8 -5.6 glucose-1-phosphate thymidylyltransferase compare
Atu3296 -0.8 -4.8 two component response regulator for C4-dicarboxylate transport compare
Atu0346 -0.7 -0.9 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1629 -0.7 -1.1 transcriptional regulator, ArsR family compare
Atu1774 -0.7 -4.1 ABC transporter, substrate binding protein (peptide) compare
Atu0026 -0.7 -0.9 hypothetical protein compare
Atu0361 -0.7 -2.2 transcriptional regulator compare
Atu0099 -0.7 -3.6 prephenate dehydratase compare
Atu3298 -0.7 -5.4 C4-dicarboxylate transporter DctA compare
Atu3429 -0.7 -1.2 hypothetical protein compare
Atu5145 -0.7 -1.3 acetyltransferase compare
Atu4317 -0.7 -2.3 TetR family transcriptional regulator compare
Atu1456 -0.7 -4.2 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1439 -0.7 -1.7 hypothetical protein compare
Atu1333 -0.7 -2.3 outer membrane protein compare
Atu1546 -0.7 -2.7 transcriptional regulator, MerR family compare
Atu2710 -0.7 -3.3 hypothetical protein compare
Atu0029 -0.7 -2.9 S-adenosylhomocysteine hydrolase compare
Atu2747 -0.6 -4.3 hypothetical protein compare
Atu1077 -0.6 -2.7 DNA repair protein compare
Atu0876 -0.6 -1.5 superoxide dismutase compare
Atu1462 -0.6 -4.4 glycine cleavage system protein P2 compare
Atu0188 -0.6 -1.5 ABC transporter, membrane spanning protein (peptide) compare
Atu2464 -0.6 -1.9 formyltetrahydrofolate deformylase compare
Atu1149 -0.6 -1.1 adenylate cyclase compare
Atu2770 -0.6 -2.5 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu2796 -0.6 -2.4 precorrin-4 C11-methyltransferase compare
Atu0419 -0.6 -1.1 two component sensor kinase compare
Atu1737 -0.6 -1.1 hypothetical protein compare
Atu5147 -0.6 -1.8 Mg(2+) transport ATPase compare
Atu0585 -0.6 -1.2 hypothetical protein compare
Atu1062 -0.6 -1.2 phosphatidylserine synthase compare
Atu2335 -0.6 -1.3 hypothetical protein compare
Atu1334 -0.5 -2.8 aspartate transaminase compare
Atu3496 -0.5 -1.7 hypothetical protein compare
Atu0086 -0.5 -0.6 ribosome-binding factor A compare
Atu0690 -0.5 -1.4 hypothetical protein compare
Atu3345 -0.5 -1.9 6-pyruvoyl tetrahydrobiopterin synthase compare
Atu2083 -0.5 -1.7 DNA repair protein RecN compare
Atu3731 -0.5 -3.5 5-formyltetrahydrofolate cyclo-ligase compare
Atu5513 -0.5 -0.4 cold shock protein compare
Atu0524 -0.5 -2.4 transcriptional regulator, LuxR family compare
Atu0566 -0.5 -1.0 hypothetical protein compare
Atu1182 -0.5 -1.3 hypothetical protein compare
Atu4055 -0.5 -2.3 endo-1,3-1,4-beta-glycanase compare
Atu0836 -0.5 -1.7 Glutathione-S-transferase compare
Atu3012 -0.5 -0.6 hypothetical protein compare
Atu5462 -0.5 -1.8 ABC transporter nucleotide binding/ATPase compare
Atu5448 -0.5 -1.9 hypothetical protein compare
Atu3120 -0.5 -0.8 hypothetical protein compare
Atu1573 -0.5 -1.2 hypothetical protein compare
Atu2200 -0.5 -1.7 cold shock protein compare
Atu8047 -0.5 -1.2 hypothetical protein compare
Atu8056 -0.5 -0.8 hypothetical protein compare
Atu3866 -0.5 -3.9 hypothetical protein compare
Atu0025 -0.5 -0.9 hypothetical protein compare
Atu2073 -0.5 -2.4 membrane protein compare
Atu0152 -0.5 -1.0 hypothetical protein compare
Atu4077 -0.5 -3.4 glycogen branching protein compare
Atu2123 -0.5 -2.5 methylenetetrahydrofolate reductase compare
Atu4888 -0.5 -1.6 hypothetical protein compare
Atu2811 -0.5 -3.3 hypothetical protein compare
Atu8088 -0.5 -1.0 hypothetical protein compare
Atu6159 -0.5 -0.9 hypothetical protein compare
Atu0189 -0.5 -1.4 ABC transporter, membrane spanning protein (peptide) compare
Atu2799 -0.5 -1.9 precorrin-6x reductase compare
Atu0893 -0.5 -1.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu4873 -0.5 -1.8 TetR family transcriptional regulator compare
Atu2352 -0.5 -1.2 hypothetical protein compare
Atu2800 -0.5 -1.3 precorrin-3B C17-methyltransferase compare
Atu2380 -0.5 -1.4 hypothetical protein compare
Atu5444 -0.5 -1.7 short-chain dehydrogenase compare
Atu1454 -0.5 -3.1 siroheme synthase compare
Atu3867 -0.4 -3.1 hypothetical protein compare
Atu1653 -0.4 -2.4 hypothetical protein compare
Atu5517 -0.4 -0.6 hypothetical protein compare
Atu0807 -0.4 -2.2 metallo-beta-lactamase superfamily protein compare
Atu5101 -0.4 -0.9 hypothetical protein compare
Atu8162 -0.4 -0.7 hypothetical protein compare
Atu2729 -0.4 -1.1 hypothetical protein compare
Atu1754 -0.4 -0.8 hypothetical protein compare
Atu2470 -0.4 -2.3 hypothetical protein compare
Atu2757 -0.4 -2.9 nitrogen regulatory protein PII compare
Atu3009 -0.4 -0.6 exopolysaccharide production protein compare
Atu3482 -0.4 -2.8 pantoate--beta-alanine ligase compare
Atu2044 -0.4 -2.1 HFLC protein compare
Atu0771 -0.4 -2.6 cytochrome c oxidase subunit III compare
Atu1028 -0.4 -0.9 hypothetical protein compare
Atu4306 -0.4 -2.4 two component response regulator compare
Atu0031 -0.4 -0.7 PTS system, IIA component compare
Atu4896 -0.4 -0.7 acetyltransferase compare
Atu2379 -0.4 -3.2 phosphomannomutase compare
Atu0977 -0.4 -1.7 serine protease DO-like protease compare
Atu1565 -0.4 -1.3 serine acetyltransferase compare
Atu1686 -0.4 -3.2 peptidyl-prolyl cis-trans isomerse D compare
Atu3095 -0.4 -1.2 hypothetical protein compare
Atu0702 -0.4 -1.4 calcium-binding protein, regucalcin compare
Atu6126 -0.4 -1.5 conjugal transfer protein, Dtr system compare
Atu1637 -0.4 -1.9 hypothetical protein compare
Atu0784 -0.4 -1.7 hypothetical protein compare
Atu0277 -0.4 -2.5 hypothetical protein compare
Atu2802 -0.4 -2.9 precorrin-8X methylmutase compare
Atu0885 -0.4 -1.5 hypothetical protein compare
Atu0030 -0.4 -0.7 phosphocarrier protein HPr compare
Atu0943 -0.4 -0.8 hypothetical protein compare
Atu1667 -0.4 -0.9 hypothetical protein compare
Atu2783 -0.4 -2.2 acetyltransferase compare
Atu0048 -0.4 -2.8 hypothetical protein compare
Atu3613 -0.4 -1.8 hypothetical protein compare
Atu2797 -0.4 -1.4 cobalamin biosynthesis protein compare
Atu1291 -0.4 -0.9 hypothetical protein compare
Atu2807 -0.4 -1.8 cob(I)alamin adenosyltransferase compare
Atu5166 -0.4 -1.2 type IV secretion protein AvhB5 compare


Specific Phenotypes

For 3 genes in this experiment

For nitrogen source L-Isoleucine in Agrobacterium fabrum C58

For nitrogen source L-Isoleucine across organisms