Experiment set3IT053 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth with Ceftazidime hydrate 0.0005 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CA264_12335 +1.9 12.8 pyridoxal phosphate-dependent aminotransferase compare
CA264_03890 +1.7 12.8 family 2 glycosyl transferase compare
CA264_12405 +1.6 11.5 hypothetical protein compare
CA264_12325 +1.6 12.1 polysaccharide biosynthesis protein compare
CA264_12365 +1.6 14.0 asparagine synthetase B compare
CA264_12400 +1.5 10.3 hypothetical protein compare
CA264_18080 +1.5 8.3 hypothetical protein compare
CA264_15235 +1.5 10.8 hypothetical protein compare
CA264_04300 +1.5 12.2 ABC transporter substrate-binding protein compare
CA264_03910 +1.5 9.2 family 2 glycosyl transferase compare
CA264_06600 +1.5 11.5 glycosyltransferase compare
CA264_06345 +1.4 12.9 hypothetical protein compare
CA264_12455 +1.4 10.9 hypothetical protein compare
CA264_03905 +1.4 7.2 polysaccharide deacetylase family protein compare
CA264_17110 +1.4 8.7 radical SAM protein compare
CA264_18345 +1.4 2.7 hypothetical protein compare
CA264_19925 +1.4 7.9 peptidyl-prolyl cis-trans isomerase compare
CA264_04295 +1.3 9.5 hypothetical protein compare
CA264_12370 +1.3 10.5 hypothetical protein compare
CA264_12350 +1.3 9.5 glycosyltransferase family 1 protein compare
CA264_14365 +1.3 7.3 radical SAM protein compare
CA264_06400 +1.3 9.9 hypothetical protein compare
CA264_04290 +1.3 9.5 ABC transporter permease compare
CA264_06395 +1.3 8.8 DUF58 domain-containing protein compare
CA264_12385 +1.2 9.3 glycosyl transferase compare
CA264_04985 +1.2 8.2 hypothetical protein compare
CA264_17650 +1.2 6.3 geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase compare
CA264_12355 +1.2 7.9 polysaccharide deacetylase compare
CA264_18665 +1.2 6.8 prenyltransferase compare
CA264_19730 +1.2 9.9 peptidylprolyl isomerase compare
CA264_11800 +1.2 8.8 aerotolerance protein compare
CA264_08005 +1.2 2.6 phosphonate ABC transporter ATP-binding protein compare
CA264_18765 +1.2 9.2 ATPase compare
CA264_06405 +1.1 9.0 VWA domain-containing protein compare
CA264_14765 +1.1 9.1 hypothetical protein compare
CA264_12260 +1.1 8.7 hypothetical protein compare
CA264_04305 +1.1 10.2 hypothetical protein compare
CA264_00235 +1.1 4.1 hypothetical protein compare
CA264_00275 +1.1 7.0 hypothetical protein compare
CA264_04895 +1.1 7.9 peptidase M23 compare
CA264_05250 +1.1 9.2 hypothetical protein compare
CA264_01995 +1.1 8.6 SH3 domain-containing protein compare
CA264_12390 +1.1 8.1 hypothetical protein compare
CA264_18695 +1.1 7.8 glycogen synthase compare
CA264_11795 +1.1 7.8 aerotolerance regulator BatB compare
CA264_04525 +1.1 6.3 DUF2279 domain-containing protein compare
CA264_20650 +1.1 5.5 diviva domain containing protein compare
CA264_11010 +1.0 9.5 hypothetical protein compare
CA264_12375 +1.0 7.7 hypothetical protein compare
CA264_01370 +1.0 9.4 hypothetical protein compare
CA264_17190 +1.0 1.8 methionine-R-sulfoxide reductase compare
CA264_19920 +1.0 7.7 alanine glycine permease compare
CA264_00660 +1.0 6.4 hypothetical protein compare
CA264_20380 +1.0 7.7 lytic transglycosylase compare
CA264_19245 +1.0 6.5 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit compare
CA264_20845 +1.0 1.5 hypothetical protein compare
CA264_04285 +1.0 4.5 hypothetical protein compare
CA264_02415 +1.0 3.2 dethiobiotin synthase compare
CA264_15255 +1.0 5.3 alpha/beta hydrolase compare
CA264_16760 +0.9 7.7 hypothetical protein compare
CA264_00160 +0.9 8.3 hypothetical protein compare
CA264_06030 +0.9 4.6 cell envelope biogenesis protein OmpA compare
CA264_06610 +0.9 2.6 iron-dependent repressor compare
CA264_06095 +0.9 3.1 hypothetical protein compare
CA264_17345 +0.9 5.7 ABC transporter ATP-binding protein compare
CA264_16680 +0.9 7.5 hypothetical protein compare
CA264_18945 +0.9 2.1 hypothetical protein compare
CA264_08780 +0.9 6.5 hypothetical protein compare
CA264_02160 +0.9 5.6 hypothetical protein compare
CA264_04700 +0.9 7.6 cyanophycin synthetase compare
CA264_19875 +0.9 2.8 RNA methyltransferase compare
CA264_17790 +0.9 4.0 hypothetical protein compare
CA264_11655 +0.9 1.4 hypothetical protein compare
CA264_19970 +0.9 3.0 hypothetical protein compare
CA264_18860 +0.9 6.5 TIGR00374 family protein compare
CA264_20120 +0.9 2.1 hypothetical protein compare
CA264_01595 +0.9 3.7 hypothetical protein compare
CA264_01405 +0.9 5.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
CA264_15520 +0.9 3.7 hypothetical protein compare
CA264_19830 +0.9 6.6 hypothetical protein compare
CA264_12465 +0.9 5.3 NAD-dependent dehydratase compare
CA264_14290 +0.9 5.7 glycosyl transferase family 2 compare
CA264_04655 +0.8 4.8 cell division protein compare
CA264_19010 +0.8 7.7 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
CA264_11015 +0.8 5.5 hypothetical protein compare
CA264_14480 +0.8 6.0 large-conductance mechanosensitive channel compare
CA264_06450 +0.8 4.2 hypothetical protein compare
CA264_17905 +0.8 4.8 UDP-glucose 4-epimerase GalE compare
CA264_19885 +0.8 5.1 uridine kinase compare
CA264_08080 +0.8 4.3 gliding motility-associated ABC transporter ATP-binding subunit GldA compare
CA264_10005 +0.8 1.5 hypothetical protein compare
CA264_16370 +0.8 4.5 gliding motility lipoprotein GldK compare
CA264_00285 +0.8 5.6 glycosyl transferase compare
CA264_09285 +0.8 4.4 anti-anti-sigma factor compare
CA264_17560 +0.8 5.3 hypothetical protein compare
CA264_17050 +0.8 7.4 hypothetical protein compare
CA264_03870 +0.7 3.0 transcription elongation factor GreA compare
CA264_02715 +0.7 2.9 UDP-glucose--dolichyl-phosphate glucosyltransferase compare
CA264_16330 +0.7 3.5 hypothetical protein compare
CA264_00280 +0.7 5.7 DegT/DnrJ/EryC1/StrS aminotransferase compare
CA264_20615 +0.7 4.1 N-acetylmuramoyl-L-alanine amidase compare
CA264_13295 +0.7 4.4 rhomboid family intramembrane serine protease compare
CA264_17925 +0.7 5.6 chromate transporter compare
CA264_17845 +0.7 5.4 GNAT family N-acetyltransferase compare
CA264_15250 +0.7 2.8 cbs domain containing protein compare
CA264_08075 +0.7 3.3 gliding motility-associated ABC transporter permease subunit GldF compare
CA264_08070 +0.7 4.0 gliding motility-associated ABC transporter substrate-binding protein GldG compare
CA264_14965 +0.7 5.2 glycosyltransferase WbuB compare
CA264_21460 +0.7 1.8 hypothetical protein compare
CA264_08105 +0.7 3.0 NupC/NupG family nucleoside CNT transporter compare
CA264_16360 +0.7 3.4 gliding motility protein GldM compare
CA264_12435 +0.7 3.5 GlcNAc-PI de-N-acetylase compare
CA264_20560 +0.7 3.1 DNA repair ATPase compare
CA264_13405 +0.7 3.8 NAD-dependent dehydratase compare
CA264_12075 +0.7 5.3 PAS domain S-box protein compare
CA264_13800 +0.7 1.3 hypothetical protein compare
CA264_15010 +0.7 3.0 gliding motility lipoprotein GldD compare
CA264_12415 +0.7 5.3 hypothetical protein compare
CA264_00040 +0.7 4.9 hypothetical protein compare
CA264_14515 +0.7 3.4 peptidase M23 compare
CA264_17915 +0.7 2.5 LPS biosynthesis protein WbpP compare
CA264_18295 +0.7 4.8 iron-sulfur cluster-binding protein compare
CA264_02155 +0.7 5.4 peptidase M23 compare
CA264_20275 +0.7 3.2 DNA-binding protein compare
CA264_00835 +0.6 3.5 hypothetical protein compare
CA264_00420 +0.6 2.9 fructose-bisphosphatase class I compare
CA264_18780 +0.6 3.8 hypothetical protein compare
CA264_03805 +0.6 4.3 serine protease compare
CA264_10970 +0.6 4.7 ferredoxin compare
CA264_07270 +0.6 2.4 hypothetical protein compare
CA264_04835 +0.6 5.3 ABC transporter ATP-binding protein compare
CA264_16335 +0.6 1.7 hypothetical protein compare
CA264_20325 +0.6 4.2 cell envelope biogenesis protein OmpA compare
CA264_10955 +0.6 1.9 phenylacetate-CoA oxygenase subunit PaaJ compare
CA264_15970 +0.6 2.6 hypothetical protein compare
CA264_09225 +0.6 3.1 Fe-S oxidoreductase compare
CA264_20330 +0.6 2.9 hypothetical protein compare
CA264_16390 +0.6 1.7 hypothetical protein compare
CA264_00515 +0.6 3.9 hypothetical protein compare
CA264_16415 +0.6 1.4 hypothetical protein compare
CA264_02580 +0.6 2.7 transcriptional regulator compare
CA264_00915 +0.6 4.4 hypothetical protein compare
CA264_14910 +0.6 1.9 30S ribosomal protein THX compare
CA264_06605 +0.6 2.5 ketoacyl-ACP synthase III compare
CA264_09185 +0.6 2.3 hypothetical protein compare
CA264_04905 +0.6 4.7 acetyl-CoA carboxylase biotin carboxylase subunit compare
CA264_04770 +0.6 3.5 metal-dependent hydrolase compare
CA264_06445 +0.6 1.3 NUDIX hydrolase compare
CA264_16715 +0.6 4.7 flagellar motor protein MotB compare
CA264_00085 +0.6 2.3 hypothetical protein compare
CA264_03025 +0.6 3.6 T9SS C-terminal target domain-containing protein compare
CA264_20375 +0.6 1.8 hypothetical protein compare
CA264_00540 +0.6 3.6 translational GTPase TypA compare
CA264_12280 +0.6 1.1 hypothetical protein compare
CA264_14510 +0.6 3.9 hypothetical protein compare
CA264_12965 +0.5 1.9 hypothetical protein compare
CA264_07790 +0.5 4.4 ankryin compare
CA264_07920 +0.5 4.1 response regulator compare
CA264_19895 +0.5 2.9 phosphoribosyltransferase compare
CA264_08290 +0.5 2.8 Fe-S metabolism protein SufE compare
CA264_07260 +0.5 3.3 hypothetical protein compare
CA264_15335 +0.5 4.9 SusC/RagA family TonB-linked outer membrane protein compare
CA264_17875 +0.5 2.0 amino acid dehydrogenase compare
CA264_02220 +0.5 4.2 signal peptide peptidase SppA compare
CA264_02565 +0.5 1.4 hypothetical protein compare
CA264_06410 +0.5 3.2 YggS family pyridoxal phosphate enzyme compare
CA264_01155 +0.5 1.4 Zn-dependent protease compare
CA264_05300 +0.5 3.6 hypothetical protein compare
CA264_13505 +0.5 1.6 hypothetical protein compare
CA264_04385 +0.5 1.9 hypothetical protein compare
CA264_15595 +0.5 3.5 hypothetical protein compare
CA264_15890 +0.5 3.5 hypothetical protein compare
CA264_12345 +0.5 2.1 lipid carrier--UDP-N-acetylgalactosaminyltransferase compare
CA264_15325 +0.5 4.3 hypothetical protein compare
CA264_04765 +0.5 3.3 chromosome partitioning protein ParA compare
CA264_20570 +0.5 1.2 inorganic pyrophosphatase compare
CA264_04760 +0.5 3.0 chromosome partitioning protein ParB compare
CA264_13790 +0.5 1.7 hypothetical protein compare
CA264_21445 +0.5 1.3 metal transporter compare
CA264_16980 +0.5 0.9 thiol reductase thioredoxin compare
CA264_15790 +0.5 1.7 hypothetical protein compare
CA264_01480 +0.5 2.4 dihydroorotase compare
CA264_04145 +0.5 1.9 hypothetical protein compare
CA264_12425 +0.5 2.5 CMP-N-acetylneuraminic acid synthetase compare
CA264_01865 +0.5 1.7 polyisoprenoid-binding protein compare
CA264_00430 +0.5 2.3 hypothetical protein compare
CA264_06475 +0.5 0.6 hypothetical protein compare
CA264_15960 +0.5 2.8 hypothetical protein compare
CA264_06015 +0.5 2.6 hypothetical protein compare
CA264_13660 +0.5 1.9 putative DNA modification/repair radical SAM protein compare
CA264_06330 +0.5 1.1 cation:proton antiporter compare
CA264_14625 +0.5 0.7 phosphoribosylformylglycinamidine synthase subunit PurS compare
CA264_05320 +0.5 3.0 para-aminobenzoate synthase compare
CA264_14300 +0.5 2.9 four helix bundle protein compare
CA264_18030 +0.5 3.2 cation transporter compare
CA264_13170 +0.5 2.1 hypothetical protein compare
CA264_05460 +0.5 3.8 hypothetical protein compare
CA264_18410 +0.5 1.1 glycine dehydrogenase (aminomethyl-transferring) compare
CA264_11715 +0.5 1.2 hypothetical protein compare
CA264_04010 +0.5 3.2 YeeE/YedE family protein compare


Specific Phenotypes

None in this experiment

For Pontibacter actiniarum KMM 6156, DSM 19842 in stress experiments

For stress Ceftazidime hydrate across organisms