Experiment set3IT052 for Agrobacterium fabrum C58

Compare to:

L-Aspartic Acid nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu1750 -9.4 -6.5 phosphoribosyl c-AMP cyclohydrolase compare
Atu3707 -6.5 -4.4 phosphoserine aminotransferase compare
Atu1687 -6.4 -13.1 anthranilate phosphoribosyltransferase compare
Atu0679 -5.8 -8.9 ATP phosphoribosyltransferase compare
Atu1688 -5.8 -6.9 indole-3-glycerol-phosphate synthase compare
Atu0099 -5.8 -12.8 prephenate dehydratase compare
Atu0537 -5.8 -6.9 histidinol dehydrogenase compare
Atu0043 -5.5 -3.8 imidazoleglycerol-phosphate dehydratase compare
Atu2289 -5.5 -22.0 anthranilate synthase component I and II compare
Atu0035 -5.4 -10.2 phosphoenolpyruvate carboxykinase compare
Atu3706 -5.4 -10.3 D-3-phosphoglycerate dehydrogenase compare
Atu2791 -5.3 -8.6 3-isopropylmalate dehydrogenase compare
Atu0678 -5.2 -8.6 histidyl-tRNA synthetase compare
Atu3469 -5.0 -3.4 phosphoglyceromutase compare
Atu2650 -5.0 -14.7 glycerol-3-phosphate dehydrogenase compare
Atu0017 -4.9 -4.8 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu4505 -4.8 -14.0 LacI family transcriptional regulator compare
Atu2036 -4.7 -17.1 acetolactate synthase III, large subunit compare
Atu2709 -4.7 -19.8 3-isopropylmalate dehydratase, large subunit compare
Atu2264 -4.6 -14.0 2-isopropylmalate synthase compare
Atu1588 -4.6 -11.6 homoserine dehydrogenase compare
Atu3740 -4.6 -11.4 fructose bisphosphate aldolase compare
Atu0038 -4.5 -7.4 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0041 -4.5 -4.3 glutamine amidotransferase compare
Atu1620 -4.4 -15.0 triosephosphate isomerase compare
Atu2718 -4.3 -10.3 homoserine O-succinyltransferase compare
Atu2040 -4.2 -7.6 phosphoserine phosphatase compare
Atu1030 -4.1 -2.6 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2790 -4.0 -3.8 3-isopropylmalate dehydratase, small subunit compare
Atu1850 -4.0 -5.9 phosphoribosylformylglycinamidine synthetase II compare
Atu1205 -3.9 -13.6 threonine dehydratase compare
Atu0647 -3.9 -9.4 phosphoribosylamine--glycine ligase compare
Atu3754 -3.9 -8.5 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3739 -3.9 -3.9 phosphoglycerate kinase compare
Atu1140 -3.8 -5.9 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0432 -3.8 -10.6 O-succinylhomoserine sulfhydrylase compare
Atu3885 -3.7 -9.3 inositol monophosphatase compare
Atu1075 -3.7 -9.6 amidophosphoribosyltransferase compare
Atu1359 -3.6 -2.1 dnaK deletion suppressor protein compare
Atu0039 -3.5 -3.2 imidazoleglycerol-phosphate synthase cyclase compare
Atu0399 -3.5 -10.1 dihydroorotase compare
Atu0298 -3.4 -10.5 orotidine 5 compare
Atu1845 -3.4 -5.0 phosphoribosylformylglycinamidine synthase I compare
Atu1141 -3.4 -7.8 Phosphoribosylglycinamide synthetase compare
Atu0400 -3.4 -6.1 orotate phosphoribosyltransferase compare
Atu2747 -3.4 -15.8 hypothetical protein compare
Atu0346 -3.2 -4.3 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0486 -3.2 -9.1 dihydroorotate dehydrogenase compare
Atu2115 -3.1 -11.4 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu1686 -3.1 -18.7 peptidyl-prolyl cis-trans isomerse D compare
Atu2015 -3.1 -12.7 aminotransferase compare
Atu1446 -3.1 -3.4 two component response regulator compare
Atu1579 -2.9 -13.2 ABC transporter, membrane spanning protein (amino acid) conserved
Atu3755 -2.9 -6.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0434 -2.9 -4.1 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0030 -2.8 -2.6 phosphocarrier protein HPr compare
Atu1308 -2.8 -5.4 aspartate carbamoyl transferase catalytic subunit compare
Atu0723 -2.7 -3.1 FAD dependent oxidoreductase compare
Atu1577 -2.5 -7.9 ABC transporter, substrate binding protein (amino acid) conserved
Atu1589 -2.4 -11.3 aminotransferase, class I compare
Atu1580 -2.4 -10.2 ABC transporter, nucleotide binding/ATPase protein (amino acid) compare
Atu1578 -2.4 -10.9 ABC transporter, membrane spanning protein (amino acid) conserved
Atu1685 -2.3 -1.8 hypothetical protein compare
Atu0040 -2.2 -1.8 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1307 -2.2 -7.0 dihydroorotase compare
Atu1844 -2.1 -4.4 Phosphoribosylformylglycinamidine synthetase compare
Atu2548 -1.8 -12.2 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1456 -1.8 -8.3 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu0769 -1.7 -2.9 protoheme IX farnesyltransferase compare
Atu5513 -1.7 -1.5 cold shock protein compare
Atu8099 -1.7 -1.5 hypothetical protein compare
Atu8054 -1.6 -0.7 hypothetical protein compare
Atu3009 -1.6 -1.7 exopolysaccharide production protein compare
Atu0361 -1.4 -3.0 transcriptional regulator compare
Atu8115 -1.4 -5.4 Hypothetical Protein compare
Atu3482 -1.4 -7.5 pantoate--beta-alanine ligase compare
Atu1454 -1.4 -6.9 siroheme synthase compare
Atu2155 -1.3 -10.5 methionine synthase compare
Atu1462 -1.3 -8.8 glycine cleavage system protein P2 compare
Atu6045 -1.3 -0.9 replication protein C compare
Atu0029 -1.3 -4.6 S-adenosylhomocysteine hydrolase compare
Atu1455 -1.3 -3.4 hypothetical protein compare
Atu1464 -1.2 -5.9 glycine cleavage system T protein, aminomethyltransferase compare
Atu6114 -1.2 -1.7 hypothetical protein compare
Atu1028 -1.2 -2.4 hypothetical protein compare
Atu1219 -1.2 -1.3 hypothetical protein compare
Atu1364 -1.2 -3.7 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1457 -1.1 -2.6 hypothetical protein compare
Atu4166 -1.1 -2.3 UDP-glucose 4-epimerase compare
Atu5045 -1.1 -1.2 hypothetical protein compare
Atu5430 -1.1 -1.0 hypothetical protein compare
Atu2376 -1.1 -0.9 hypothetical protein compare
Atu4173 -1.0 -2.7 phosphoenolpyruvate-protein phosphotransferase compare
Atu8162 -1.0 -1.3 hypothetical protein compare
Atu1463 -1.0 -4.6 glycine cleavage system component H compare
Atu3483 -1.0 -2.4 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1445 -1.0 -3.7 two component sensor kinase compare
Atu4613 -1.0 -7.1 glycosyltransferase compare
Atu0331 -1.0 -2.2 sigma-54 modulation protein compare
Atu0876 -1.0 -2.3 superoxide dismutase compare
Atu4161 -0.9 -2.3 hypothetical protein compare
Atu2207 -0.9 -2.8 two component sensor kinase compare
Atu4614 -0.9 -5.2 glycosyltransferase compare
Atu5043 -0.9 -2.2 hypothetical protein compare
Atu0354 -0.9 -2.0 ferric uptake regulator compare
Atu3468 -0.9 -1.0 hypothetical protein compare
Atu2800 -0.9 -1.6 precorrin-3B C17-methyltransferase compare
Atu0421 -0.9 -1.4 ABC transporter, membrane spanning protein compare
Atu5142 -0.9 -0.8 hypothetical protein compare
Atu1748 -0.9 -5.0 NIFU-like protein compare
Atu2439 -0.8 -1.5 hypothetical protein compare
Atu3012 -0.8 -1.6 hypothetical protein compare
Atu2640 -0.8 -3.5 hypothetical protein compare
Atu2766 -0.8 -7.2 NAD-glutamate dehydrogenase compare
Atu0031 -0.8 -1.2 PTS system, IIA component compare
Atu1163 -0.8 -2.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0641 -0.8 -2.7 hypothetical protein compare
Atu4096 -0.8 -4.3 nicotinate-nucleotide pyrophosphorylase compare
Atu6156 -0.8 -1.8 virA/G regulated gene compare
Atu0291 -0.8 -5.1 hypothetical protein compare
Atu5179 -0.8 -2.8 hypothetical protein compare
Atu4608 -0.8 -5.4 hypothetical protein compare
Atu0941 -0.8 -0.9 hypothetical protein compare
Atu4610 -0.8 -4.8 sugar nucleotide epimerase/dehydratase compare
Atu3730 -0.8 -1.3 hypothetical protein compare
Atu4615 -0.8 -5.5 glucose-1-phosphate thymidylyltransferase compare
Atu4609 -0.7 -5.4 glycosyltransferase compare
Atu4618 -0.7 -5.7 dTDP-rhamnose-3,5-epimerase compare
Atu2789 -0.7 -1.7 hypothetical protein compare
Atu0422 -0.7 -1.5 ABC transporter, membrane spanning protein compare
Atu3298 -0.7 -4.9 C4-dicarboxylate transporter DctA compare
Atu5451 -0.7 -0.5 hypothetical protein compare
Atu2163 -0.7 -1.0 hypothetical protein compare
Atu5163 -0.7 -1.0 type IV secretion protein AvhB2 compare
Atu0846 -0.7 -2.6 transcriptional regulator, MarR family compare
Atu5443 -0.7 -2.4 TetR family transcriptional regulator compare
Atu4677 -0.7 -1.1 hypothetical protein compare
Atu5088 -0.7 -1.2 hypothetical protein compare
Atu4098 -0.7 -5.1 quinolinate synthetase compare
Atu3311 -0.7 -5.5 phosphomannose isomerase compare
Atu0972 -0.7 -3.1 lipA protein compare
Atu1774 -0.7 -4.3 ABC transporter, substrate binding protein (peptide) compare
Atu4617 -0.7 -4.1 dTDP-D-glucose-4,6-dehydratase compare
Atu0188 -0.7 -2.4 ABC transporter, membrane spanning protein (peptide) compare
Atu1848 -0.7 -4.0 transcriptional regulator, GntR family compare
Atu0190 -0.6 -4.1 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu3731 -0.6 -3.8 5-formyltetrahydrofolate cyclo-ligase compare
Atu1444 -0.6 -2.1 nitrogen regulation protein compare
Atu3353 -0.6 -4.0 mannose-1-phosphate guanylyltransferase compare
Atu0566 -0.6 -1.2 hypothetical protein compare
Atu2183 -0.6 -4.4 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu5468 -0.6 -1.1 hypothetical protein compare
Atu3120 -0.6 -0.8 hypothetical protein compare
Atu5149 -0.6 -2.1 acetyltransferase compare
Atu0142 -0.6 -1.7 cytochrome o ubiquinol oxidase subunit II compare
Atu2807 -0.6 -3.5 cob(I)alamin adenosyltransferase compare
Atu0837 -0.6 -3.4 transcriptional regulator, MarR family compare
Atu5046 -0.6 -1.6 hypothetical protein compare
Atu6165 -0.6 -0.3 hypothetical protein compare
Atu1573 -0.6 -1.2 hypothetical protein compare
Atu5131 -0.6 -2.4 ABC transporter nucleotide binding/ATPase compare
Atu0332 -0.6 -3.8 RNA polymerase sigma-54 factor compare
Atu1339 -0.6 -2.4 ribonuclease E compare
Atu2812 -0.6 -2.7 hypothetical protein compare
Atu2569 -0.6 -4.0 thiamine biosynthesis protein compare
Atu4873 -0.6 -2.7 TetR family transcriptional regulator compare
Atu8191 -0.6 -1.4 hypothetical protein compare
Atu3075 -0.6 -4.1 TetR family transcriptional regulator compare
Atu5470 -0.6 -1.0 hypothetical protein compare
Atu1077 -0.6 -1.6 DNA repair protein compare
Atu4346 -0.6 -2.0 hypothetical protein compare
Atu0767 -0.6 -1.9 cytochrome c oxidase subunit II compare
Atu8094 -0.6 -1.8 hypothetical protein compare
Atu5166 -0.5 -1.1 type IV secretion protein AvhB5 compare
Atu0611 -0.5 -2.7 ABC transporter, membrane spanning protein compare
Atu1737 -0.5 -1.2 hypothetical protein compare
Atu4470 -0.5 -4.0 iron ABC transporter ATPase compare
Atu0977 -0.5 -1.6 serine protease DO-like protease compare
Atu6072 -0.5 -1.9 thermophilic desulfurizing enzyme compare
Atu5427 -0.5 -1.1 hypothetical protein compare
Atu4093 -0.5 -1.3 hypothetical protein compare
Atu3296 -0.5 -4.0 two component response regulator for C4-dicarboxylate transport compare
Atu2787 -0.5 -0.7 hypothetical protein compare
Atu2237 -0.5 -1.9 cytochrome c1 compare
Atu2057 -0.5 -1.5 DNA helicase II compare
Atu5450 -0.5 -1.2 hypothetical protein compare
Atu4406 -0.5 -1.2 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu3763 -0.5 -0.9 hypothetical protein compare
Atu4837 -0.5 -2.8 hypothetical protein compare
Atu2428 -0.5 -3.1 exopolysaccharide production protein PssB compare
Atu6066 -0.5 -2.1 acyl-CoA dehydrogenase compare
Atu5494 -0.5 -1.5 hypothetical protein compare
Atu3721 -0.5 -1.3 hypothetical protein compare
Atu0690 -0.5 -1.1 hypothetical protein compare
Atu8177 -0.5 -2.0 hypothetical protein compare
Atu2733 -0.5 -1.6 hypothetical protein compare
Atu2123 -0.5 -2.5 methylenetetrahydrofolate reductase compare
Atu1565 -0.5 -1.9 serine acetyltransferase compare
Atu6188 -0.5 -1.8 virA/G regulated protein compare
Atu2710 -0.5 -3.1 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For nitrogen source L-Aspartic Acid in Agrobacterium fabrum C58

For nitrogen source L-Aspartic Acid across organisms