Experiment set3IT051 for Pseudomonas fluorescens GW456-L13
LB with Bacitracin 1 mg/ml
Group: stressMedia: LB + Bacitracin (1 mg/ml)
Culturing: pseudo13_ML2, 48 well microplate; Tecan Infinite F200, Aerobic, at 25 (C), shaken=orbital
By: Mark on 3/11/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 1191 E1,E2
Specific Phenotypes
For 8 genes in this experiment
For stress Bacitracin in Pseudomonas fluorescens GW456-L13
For stress Bacitracin across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| ABC transporter alkylphosphonate (TC 3.A.1.9.1) | 1 |
| Aromatic amino acid degradation | 1 |
| Oxidative stress | 1 |
| Photorespiration (oxidative C2 cycle) | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| superoxide radicals degradation | 2 | 2 | 1 |
| methanol oxidation to formaldehyde IV | 2 | 1 | 1 |
| ethanol degradation IV | 3 | 3 | 1 |
| reactive oxygen species degradation | 4 | 4 | 1 |