Experiment set3IT049 for Agrobacterium fabrum C58

Compare to:

L-Asparagine nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu3707 -6.5 -4.5 phosphoserine aminotransferase compare
Atu3740 -6.2 -13.3 fructose bisphosphate aldolase compare
Atu0679 -6.1 -8.4 ATP phosphoribosyltransferase compare
Atu0038 -6.1 -7.2 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1750 -5.8 -6.9 phosphoribosyl c-AMP cyclohydrolase compare
Atu0043 -5.6 -3.8 imidazoleglycerol-phosphate dehydratase compare
Atu3706 -5.5 -10.6 D-3-phosphoglycerate dehydrogenase compare
Atu0432 -5.5 -10.5 O-succinylhomoserine sulfhydrylase compare
Atu2289 -5.5 -19.5 anthranilate synthase component I and II compare
Atu0041 -5.4 -3.7 glutamine amidotransferase compare
Atu0035 -5.4 -14.8 phosphoenolpyruvate carboxykinase compare
Atu0099 -5.3 -15.4 prephenate dehydratase compare
Atu2791 -5.3 -8.4 3-isopropylmalate dehydrogenase compare
Atu1687 -5.2 -11.0 anthranilate phosphoribosyltransferase compare
Atu2650 -5.2 -14.6 glycerol-3-phosphate dehydrogenase compare
Atu2709 -5.2 -22.3 3-isopropylmalate dehydratase, large subunit compare
Atu1688 -5.1 -9.2 indole-3-glycerol-phosphate synthase compare
Atu2747 -5.1 -14.8 hypothetical protein compare
Atu2264 -5.1 -11.0 2-isopropylmalate synthase compare
Atu0017 -5.0 -4.8 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu3739 -5.0 -4.0 phosphoglycerate kinase compare
Atu0537 -5.0 -8.9 histidinol dehydrogenase compare
Atu0678 -4.8 -9.2 histidyl-tRNA synthetase compare
Atu0039 -4.8 -3.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu1588 -4.7 -13.1 homoserine dehydrogenase compare
Atu4505 -4.7 -13.6 LacI family transcriptional regulator compare
Atu2036 -4.5 -20.6 acetolactate synthase III, large subunit compare
Atu1620 -4.5 -15.0 triosephosphate isomerase compare
Atu2718 -4.5 -9.0 homoserine O-succinyltransferase compare
Atu2040 -4.4 -8.4 phosphoserine phosphatase compare
Atu1205 -4.4 -14.9 threonine dehydratase compare
Atu3885 -4.3 -7.9 inositol monophosphatase compare
Atu1686 -4.1 -20.2 peptidyl-prolyl cis-trans isomerse D compare
Atu3469 -4.1 -4.8 phosphoglyceromutase compare
Atu1141 -4.1 -7.9 Phosphoribosylglycinamide synthetase compare
Atu0647 -4.0 -10.4 phosphoribosylamine--glycine ligase compare
Atu0486 -3.9 -7.1 dihydroorotate dehydrogenase compare
Atu3754 -3.9 -7.4 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2115 -3.9 -15.3 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu1850 -3.8 -5.6 phosphoribosylformylglycinamidine synthetase II compare
Atu2790 -3.8 -4.3 3-isopropylmalate dehydratase, small subunit compare
Atu1140 -3.7 -6.1 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0723 -3.7 -3.6 FAD dependent oxidoreductase compare
Atu0399 -3.7 -7.8 dihydroorotase compare
Atu0298 -3.6 -9.9 orotidine 5 compare
Atu1685 -3.6 -2.1 hypothetical protein compare
Atu1844 -3.6 -5.6 Phosphoribosylformylglycinamidine synthetase compare
Atu1308 -3.4 -7.9 aspartate carbamoyl transferase catalytic subunit compare
Atu1307 -3.4 -7.4 dihydroorotase compare
Atu1075 -3.3 -9.9 amidophosphoribosyltransferase compare
Atu0400 -3.3 -6.0 orotate phosphoribosyltransferase compare
Atu2015 -3.2 -11.9 aminotransferase compare
Atu0040 -3.1 -1.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1845 -2.9 -7.3 phosphoribosylformylglycinamidine synthase I compare
Atu3755 -2.7 -4.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1456 -2.7 -12.8 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1589 -2.6 -12.0 aminotransferase, class I compare
Atu2548 -2.5 -17.4 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu3482 -2.3 -9.3 pantoate--beta-alanine ligase compare
Atu0876 -2.2 -4.1 superoxide dismutase compare
Atu1446 -2.2 -4.5 two component response regulator compare
Atu3483 -2.2 -6.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1454 -2.0 -9.5 siroheme synthase compare
Atu0434 -2.0 -4.2 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1457 -1.9 -2.2 hypothetical protein compare
Atu3763 -1.8 -2.8 hypothetical protein compare
Atu2155 -1.7 -14.3 methionine synthase compare
Atu3731 -1.7 -9.3 5-formyltetrahydrofolate cyclo-ligase compare
Atu1030 -1.7 -2.7 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1455 -1.7 -4.4 hypothetical protein compare
Atu4072 -1.7 -2.7 nodulation protein N compare
Atu1503 -1.5 -1.9 hypothetical protein compare
Atu5430 -1.5 -1.3 hypothetical protein compare
Atu8115 -1.5 -4.6 Hypothetical Protein compare
Atu0422 -1.5 -3.0 ABC transporter, membrane spanning protein compare
Atu0029 -1.4 -6.8 S-adenosylhomocysteine hydrolase compare
Atu3121 -1.4 -2.1 cold shock protein compare
Atu0641 -1.4 -4.2 hypothetical protein compare
Atu1748 -1.4 -5.9 NIFU-like protein compare
Atu6114 -1.3 -1.5 hypothetical protein compare
Atu1439 -1.3 -2.6 hypothetical protein compare
Atu2020 -1.3 -3.8 transcriptional regulator, TetR family compare
Atu4096 -1.3 -6.9 nicotinate-nucleotide pyrophosphorylase compare
Atu0346 -1.3 -1.4 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0769 -1.3 -2.4 protoheme IX farnesyltransferase compare
Atu4098 -1.3 -8.5 quinolinate synthetase compare
Atu3791 -1.2 -8.0 L-asparaginase conserved
Atu2439 -1.2 -1.8 hypothetical protein compare
Atu0291 -1.1 -7.3 hypothetical protein compare
Atu5088 -1.1 -2.1 hypothetical protein compare
Atu1462 -1.1 -7.7 glycine cleavage system protein P2 compare
Atu4097 -1.1 -6.2 L-aspartate oxidase compare
Atu5142 -1.1 -1.5 hypothetical protein compare
Atu1464 -1.1 -4.1 glycine cleavage system T protein, aminomethyltransferase compare
Atu2640 -1.0 -3.2 hypothetical protein compare
Atu1359 -1.0 -1.2 dnaK deletion suppressor protein compare
Atu4317 -1.0 -3.8 TetR family transcriptional regulator compare
Atu1463 -1.0 -4.2 glycine cleavage system component H compare
Atu0031 -0.9 -1.4 PTS system, IIA component compare
Atu2163 -0.9 -1.4 hypothetical protein compare
Atu1566 -0.9 -1.0 hypothetical protein compare
Atu4498 -0.9 -5.1 hypothetical protein compare
Atu6098 -0.9 -0.5 transcriptional regulator, HTH family compare
Atu1774 -0.9 -4.8 ABC transporter, substrate binding protein (peptide) compare
Atu3496 -0.9 -2.6 hypothetical protein compare
Atu2083 -0.8 -3.9 DNA repair protein RecN compare
Atu2205 -0.8 -4.0 transcriptional regulator, MarR family compare
Atu6107 -0.8 -2.5 hypothetical protein compare
Atu1217 -0.8 -3.4 cysteine synthase compare
Atu2127 -0.8 -4.8 L-carnitine dehydratase compare
Atu2569 -0.8 -5.6 thiamine biosynthesis protein compare
Atu3290 -0.8 -5.1 phosphomethylpyrimidine kinase compare
Atu8203 -0.8 -1.1 hypothetical protein compare
Atu0421 -0.8 -1.3 ABC transporter, membrane spanning protein compare
Atu1570 -0.8 -0.9 hypothetical protein compare
Atu0544 -0.8 -2.3 hypothetical protein compare
Atu0115 -0.8 -0.9 hypothetical protein compare
Atu3792 -0.8 -4.6 L-asparagine permease compare
Atu0485 -0.7 -1.4 hypothetical protein compare
Atu3999 -0.7 -2.1 dithiobiotin synthetase compare
Atu4608 -0.7 -5.4 hypothetical protein compare
Atu1254 -0.7 -1.5 transcriptional regulator, ArsR family compare
Atu0190 -0.7 -3.7 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1810 -0.7 -1.2 hypothetical protein compare
Atu2207 -0.7 -1.6 two component sensor kinase compare
Atu4499 -0.7 -2.6 hypothetical protein compare
Atu1573 -0.7 -1.3 hypothetical protein compare
Atu2800 -0.7 -2.6 precorrin-3B C17-methyltransferase compare
Atu0971 -0.7 -2.8 two component sensor kinase compare
Atu8162 -0.7 -1.1 hypothetical protein compare
Atu2812 -0.6 -3.2 hypothetical protein compare
Atu3997 -0.6 -5.4 biotin synthetase compare
Atu0925 -0.6 -1.6 hypothetical protein compare
Atu0837 -0.6 -2.9 transcriptional regulator, MarR family compare
Atu3627 -0.6 -0.8 hypothetical protein compare
Atu1182 -0.6 -1.3 hypothetical protein compare
Atu0566 -0.6 -1.1 hypothetical protein compare
Atu2335 -0.6 -1.7 hypothetical protein compare
Atu0141 -0.6 -1.1 cytochrome O ubiquinol oxidase subunit I compare
Atu3998 -0.6 -5.0 8-amino-7-oxononanoate synthase compare
Atu1076 -0.6 -2.6 colicin V production protein compare
Atu3288 -0.6 -2.8 hydroxyethylthiazole kinase compare
Atu2824 -0.6 -3.0 hypothetical protein compare
Atu8159 -0.6 -1.7 hypothetical protein compare
Atu2807 -0.6 -3.1 cob(I)alamin adenosyltransferase compare
Atu2793 -0.6 -3.1 cobyrinic acid a,c-diamide synthase compare
Atu2123 -0.6 -3.7 methylenetetrahydrofolate reductase compare
Atu1838 -0.6 -3.0 ABC transporter, substrate binding protein (amino acid) compare
Atu2798 -0.6 -1.8 precorrin-6y methyltransferase compare
Atu4166 -0.6 -1.6 UDP-glucose 4-epimerase compare
Atu4609 -0.6 -4.1 glycosyltransferase compare
Atu4000 -0.6 -4.2 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu0525 -0.6 -2.7 transcriptional regulator, LuxR family compare
Atu0152 -0.5 -1.6 hypothetical protein compare
Atu2125 -0.5 -1.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu2344 -0.5 -1.9 lactoylglutathione lyase compare
Atu4502 -0.5 -3.8 cobalamin synthesis protein compare
Atu2808 -0.5 -3.0 cobyric acid synthase compare
Atu0184 -0.5 -1.2 glucokinase compare
Atu8053 -0.5 -1.4 hypothetical protein compare
Atu0812 -0.5 -1.6 hypothetical protein compare
Atu2710 -0.5 -3.2 hypothetical protein compare
Atu8166 -0.5 -2.2 hypothetical protein compare
Atu2183 -0.5 -2.8 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu3730 -0.5 -1.0 hypothetical protein compare
Atu0332 -0.5 -3.0 RNA polymerase sigma-54 factor compare
Atu0755 -0.5 -1.4 hypothetical protein compare
Atu0149 -0.5 -1.6 enoyl-(acyl-carrier-protein) reductase compare
Atu1619 -0.5 -1.9 protein-export membrane protein SECG compare
Atu2677 -0.5 -1.4 protein tyrosine phosphatase compare
Atu4469 -0.5 -2.0 iron ABC transporter permease compare
Atu0972 -0.5 -3.0 lipA protein compare
Atu3008 -0.5 -0.6 hypothetical protein compare
Atu5443 -0.5 -1.7 TetR family transcriptional regulator compare
Atu2762 -0.5 -2.1 hypothetical protein compare
Atu4610 -0.5 -3.7 sugar nucleotide epimerase/dehydratase compare
Atu4613 -0.5 -4.1 glycosyltransferase compare
Atu2428 -0.5 -3.1 exopolysaccharide production protein PssB compare
Atu6042 -0.5 -2.6 autoinducer synthesis protein compare
Atu0601 -0.5 -3.4 oxidoreductase compare
Atu3750 -0.5 -1.0 thiamine-phosphate pyrophosphorylase compare
Atu0026 -0.5 -0.7 hypothetical protein compare
Atu3012 -0.5 -0.7 hypothetical protein compare
Atu0361 -0.5 -1.6 transcriptional regulator compare
Atu6051 -0.5 -2.2 conserved hypothetical protein compare
Atu2795 -0.5 -2.5 cobalamin biosynthetic protein compare
Atu2489 -0.5 -3.1 hypothetical protein compare
Atu8087 -0.5 -0.8 putative peptidoglycan binding protein compare
Atu1904 -0.5 -0.7 transcriptional regulator compare
Atu1546 -0.5 -2.3 transcriptional regulator, MerR family compare
Atu0189 -0.5 -1.5 ABC transporter, membrane spanning protein (peptide) compare
Atu4630 -0.5 -1.6 hypothetical protein compare
Atu2804 -0.5 -3.6 cobaltochelatase subunit compare
Atu0331 -0.5 -1.9 sigma-54 modulation protein compare
Atu8056 -0.5 -0.7 hypothetical protein compare
Atu8052 -0.5 -0.6 hypothetical protein compare
Atu3295 -0.5 -1.8 hypothetical protein compare
Atu4001 -0.5 -3.2 3-oxoacyl-ACP synthase compare
Atu8034 -0.5 -2.1 hypothetical protein compare
Atu2204 -0.5 -1.4 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in nitrogen source experiments

For nitrogen source L-Asparagine across organisms