Experiment set3IT048 for Agrobacterium fabrum C58

Compare to:

L-Asparagine nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu2791 -6.9 -8.2 3-isopropylmalate dehydrogenase compare
Atu1750 -6.9 -6.3 phosphoribosyl c-AMP cyclohydrolase compare
Atu2040 -6.5 -4.5 phosphoserine phosphatase compare
Atu3707 -6.3 -4.3 phosphoserine aminotransferase compare
Atu0099 -6.2 -13.9 prephenate dehydratase compare
Atu3740 -6.1 -11.7 fructose bisphosphate aldolase compare
Atu0038 -5.9 -7.1 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2289 -5.9 -19.7 anthranilate synthase component I and II compare
Atu0017 -5.8 -4.0 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0035 -5.7 -13.7 phosphoenolpyruvate carboxykinase compare
Atu0432 -5.6 -11.9 O-succinylhomoserine sulfhydrylase compare
Atu0537 -5.6 -6.6 histidinol dehydrogenase compare
Atu2264 -5.6 -14.4 2-isopropylmalate synthase compare
Atu1687 -5.5 -12.8 anthranilate phosphoribosyltransferase compare
Atu3706 -5.4 -9.8 D-3-phosphoglycerate dehydrogenase compare
Atu2709 -5.4 -20.7 3-isopropylmalate dehydratase, large subunit compare
Atu1588 -5.3 -11.4 homoserine dehydrogenase compare
Atu0041 -5.2 -3.6 glutamine amidotransferase compare
Atu4505 -5.2 -11.9 LacI family transcriptional regulator compare
Atu2650 -5.1 -14.3 glycerol-3-phosphate dehydrogenase compare
Atu0399 -5.1 -9.2 dihydroorotase compare
Atu2718 -5.0 -8.1 homoserine O-succinyltransferase compare
Atu3469 -4.9 -3.4 phosphoglyceromutase compare
Atu1307 -4.9 -6.8 dihydroorotase compare
Atu0678 -4.9 -8.1 histidyl-tRNA synthetase compare
Atu1686 -4.8 -18.3 peptidyl-prolyl cis-trans isomerse D compare
Atu2036 -4.8 -17.5 acetolactate synthase III, large subunit compare
Atu1205 -4.8 -15.9 threonine dehydratase compare
Atu1620 -4.8 -15.6 triosephosphate isomerase compare
Atu1688 -4.7 -8.7 indole-3-glycerol-phosphate synthase compare
Atu0723 -4.6 -3.2 FAD dependent oxidoreductase compare
Atu1308 -4.6 -8.8 aspartate carbamoyl transferase catalytic subunit compare
Atu0039 -4.5 -3.1 imidazoleglycerol-phosphate synthase cyclase compare
Atu0679 -4.5 -8.0 ATP phosphoribosyltransferase compare
Atu1141 -4.4 -8.1 Phosphoribosylglycinamide synthetase compare
Atu2115 -4.3 -15.2 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu2747 -4.2 -16.8 hypothetical protein compare
Atu1844 -4.1 -5.6 Phosphoribosylformylglycinamidine synthetase compare
Atu1140 -4.0 -5.4 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3885 -3.9 -9.6 inositol monophosphatase compare
Atu3739 -3.9 -4.5 phosphoglycerate kinase compare
Atu3754 -3.8 -9.2 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2015 -3.8 -15.5 aminotransferase compare
Atu0647 -3.8 -9.3 phosphoribosylamine--glycine ligase compare
Atu0043 -3.8 -3.7 imidazoleglycerol-phosphate dehydratase compare
Atu1845 -3.7 -4.8 phosphoribosylformylglycinamidine synthase I compare
Atu0298 -3.7 -10.0 orotidine 5 compare
Atu0400 -3.6 -7.7 orotate phosphoribosyltransferase compare
Atu0486 -3.6 -8.3 dihydroorotate dehydrogenase compare
Atu3755 -3.6 -6.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2790 -3.5 -3.6 3-isopropylmalate dehydratase, small subunit compare
Atu1850 -3.5 -5.2 phosphoribosylformylglycinamidine synthetase II compare
Atu1075 -3.3 -6.6 amidophosphoribosyltransferase compare
Atu5430 -3.3 -2.3 hypothetical protein compare
Atu0040 -2.9 -1.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu2548 -2.9 -17.3 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1589 -2.8 -11.0 aminotransferase, class I compare
Atu1456 -2.5 -10.1 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu3483 -2.4 -8.2 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu0769 -2.4 -2.6 protoheme IX farnesyltransferase compare
Atu3482 -2.4 -8.7 pantoate--beta-alanine ligase compare
Atu1457 -2.1 -2.0 hypothetical protein compare
Atu1454 -2.1 -8.4 siroheme synthase compare
Atu1455 -2.0 -3.6 hypothetical protein compare
Atu8052 -2.0 -1.6 hypothetical protein compare
Atu3731 -2.0 -10.4 5-formyltetrahydrofolate cyclo-ligase compare
Atu0029 -1.9 -7.4 S-adenosylhomocysteine hydrolase compare
Atu4096 -1.9 -10.1 nicotinate-nucleotide pyrophosphorylase compare
Atu8115 -1.8 -5.0 Hypothetical Protein compare
Atu1685 -1.8 -1.6 hypothetical protein compare
Atu2155 -1.8 -13.4 methionine synthase compare
Atu6114 -1.7 -1.9 hypothetical protein compare
Atu0422 -1.7 -3.4 ABC transporter, membrane spanning protein compare
Atu2020 -1.6 -5.3 transcriptional regulator, TetR family compare
Atu0876 -1.6 -2.4 superoxide dismutase compare
Atu1462 -1.6 -9.7 glycine cleavage system protein P2 compare
Atu4217 -1.6 -2.5 TetR family transcriptional regulator compare
Atu3763 -1.6 -2.2 hypothetical protein compare
Atu3791 -1.5 -8.8 L-asparaginase compare
Atu0641 -1.5 -4.1 hypothetical protein compare
Atu4098 -1.5 -9.5 quinolinate synthetase compare
Atu1030 -1.4 -1.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1463 -1.3 -4.5 glycine cleavage system component H compare
Atu1810 -1.3 -1.7 hypothetical protein compare
Atu0434 -1.3 -2.6 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0971 -1.3 -3.9 two component sensor kinase compare
Atu1464 -1.2 -4.1 glycine cleavage system T protein, aminomethyltransferase compare
Atu4166 -1.2 -3.1 UDP-glucose 4-epimerase compare
Atu0086 -1.2 -1.3 ribosome-binding factor A compare
Atu1748 -1.2 -4.9 NIFU-like protein compare
Atu3009 -1.2 -1.4 exopolysaccharide production protein compare
Atu4097 -1.1 -6.5 L-aspartate oxidase compare
Atu8138 -1.1 -1.9 hypothetical protein compare
Atu0421 -1.1 -1.5 ABC transporter, membrane spanning protein compare
Atu0149 -1.0 -3.0 enoyl-(acyl-carrier-protein) reductase compare
Atu2640 -1.0 -3.3 hypothetical protein compare
Atu0291 -1.0 -4.8 hypothetical protein compare
Atu1774 -1.0 -7.1 ABC transporter, substrate binding protein (peptide) compare
Atu0677 -1.0 -1.3 hypothetical protein compare
Atu1219 -0.9 -0.8 hypothetical protein compare
Atu1163 -0.9 -1.3 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0189 -0.9 -2.2 ABC transporter, membrane spanning protein (peptide) compare
Atu5485 -0.9 -1.5 hypothetical protein compare
Atu3288 -0.9 -4.7 hydroxyethylthiazole kinase compare
Atu3792 -0.9 -6.8 L-asparagine permease compare
Atu1446 -0.9 -2.2 two component response regulator compare
Atu2376 -0.9 -0.7 hypothetical protein compare
Atu3730 -0.9 -1.3 hypothetical protein compare
Atu2803 -0.9 -3.5 Cobalamin biosynthesis associated protein compare
Atu3727 -0.9 -2.7 hypothetical protein compare
Atu1028 -0.8 -1.8 hypothetical protein compare
Atu6156 -0.8 -2.5 virA/G regulated gene compare
Atu1076 -0.8 -3.6 colicin V production protein compare
Atu1359 -0.8 -1.0 dnaK deletion suppressor protein compare
Atu2123 -0.8 -4.0 methylenetetrahydrofolate reductase compare
Atu8151 -0.8 -1.8 hypothetical protein compare
Atu3998 -0.8 -5.7 8-amino-7-oxononanoate synthase compare
Atu0025 -0.8 -1.2 hypothetical protein compare
Atu2439 -0.8 -1.0 hypothetical protein compare
Atu4317 -0.8 -1.6 TetR family transcriptional regulator compare
Atu0953 -0.8 -0.8 hypothetical protein compare
Atu3663 -0.8 -0.9 hypothetical protein compare
Atu0986 -0.8 -1.2 hypothetical protein compare
Atu1737 -0.8 -1.5 hypothetical protein compare
Atu2083 -0.8 -2.3 DNA repair protein RecN compare
Atu3999 -0.8 -2.1 dithiobiotin synthetase compare
Atu0030 -0.8 -1.2 phosphocarrier protein HPr compare
Atu2205 -0.8 -2.5 transcriptional regulator, MarR family compare
Atu2710 -0.8 -3.9 hypothetical protein compare
Atu4897 -0.7 -1.0 hypothetical protein compare
Atu3287 -0.7 -3.6 thiamine biosynthesis associated protein compare
Atu0361 -0.7 -2.0 transcriptional regulator compare
Atu0339 -0.7 -2.2 hypothetical protein compare
Atu1333 -0.7 -1.9 outer membrane protein compare
Atu2797 -0.7 -2.4 cobalamin biosynthesis protein compare
Atu4499 -0.7 -4.2 hypothetical protein compare
Atu2569 -0.7 -5.0 thiamine biosynthesis protein compare
Atu0894 -0.7 -1.9 ABC transporter, membrane spanning protein compare
Atu4391 -0.7 -1.7 nitric oxide reductase NorE protein compare
Atu3290 -0.7 -3.5 phosphomethylpyrimidine kinase compare
Atu4773 -0.7 -1.1 two component response regulator compare
Atu4608 -0.7 -5.6 hypothetical protein compare
Atu5142 -0.7 -1.1 hypothetical protein compare
Atu0346 -0.7 -1.4 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0319 -0.7 -1.1 ubiquinone biosynthesis protein compare
Atu4000 -0.7 -5.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu0690 -0.7 -2.0 hypothetical protein compare
Atu4609 -0.7 -4.8 glycosyltransferase compare
Atu2207 -0.7 -2.1 two component sensor kinase compare
Atu6173 -0.7 -1.8 component of type IV secretion system compare
Atu1629 -0.7 -1.0 transcriptional regulator, ArsR family compare
Atu5451 -0.7 -0.6 hypothetical protein compare
Atu1495 -0.7 -1.9 hypothetical protein compare
Atu4792 -0.7 -1.5 hypothetical protein compare
Atu2800 -0.7 -2.2 precorrin-3B C17-methyltransferase compare
Atu4001 -0.6 -4.0 3-oxoacyl-ACP synthase compare
Atu1339 -0.6 -1.5 ribonuclease E compare
Atu4498 -0.6 -3.4 hypothetical protein compare
Atu4613 -0.6 -4.9 glycosyltransferase compare
Atu0190 -0.6 -3.1 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu4144 -0.6 -0.9 hypothetical protein compare
Atu2433 -0.6 -1.0 hypothetical protein compare
Atu4763 -0.6 -2.8 AsnC family transcriptional regulator compare
Atu0267 -0.6 -2.1 hypothetical protein compare
Atu0846 -0.6 -1.8 transcriptional regulator, MarR family compare
Atu0771 -0.6 -3.3 cytochrome c oxidase subunit III compare
Atu5540 -0.6 -0.4 hypothetical protein compare
Atu2807 -0.6 -2.9 cob(I)alamin adenosyltransferase compare
Atu3012 -0.6 -1.2 hypothetical protein compare
Atu0895 -0.6 -1.4 ABC transporter, substrate binding protein compare
Atu2163 -0.6 -1.1 hypothetical protein compare
Atu0845 -0.6 -2.0 hypothetical protein compare
Atu3468 -0.6 -0.6 hypothetical protein compare
Atu3496 -0.6 -2.2 hypothetical protein compare
Atu1546 -0.6 -2.6 transcriptional regulator, MerR family compare
Atu2808 -0.6 -2.9 cobyric acid synthase compare
Atu2798 -0.6 -2.4 precorrin-6y methyltransferase compare
Atu3997 -0.6 -4.0 biotin synthetase compare
Atu1573 -0.6 -1.3 hypothetical protein compare
Atu8159 -0.6 -1.2 hypothetical protein compare
Atu0332 -0.6 -3.3 RNA polymerase sigma-54 factor compare
Atu3126 -0.6 -1.5 hypothetical protein compare
Atu2795 -0.6 -2.9 cobalamin biosynthetic protein compare
Atu2827 -0.6 -1.9 hypothetical protein compare
Atu2442 -0.5 -1.1 hypothetical protein compare
Atu0533 -0.5 -1.4 putative inhibitor of septum formation compare
Atu0818 -0.5 -3.5 phosphoadenosine phosphosulfate reductase compare
Atu2058 -0.5 -1.8 hypothetical protein compare
Atu2809 -0.5 -3.0 cobalamin biosynthesis protein compare
Atu8096 -0.5 -1.1 hypothetical protein compare
Atu0485 -0.5 -2.6 hypothetical protein compare
Atu3289 -0.5 -2.0 thiamine-phosphate pyrophosphorylase compare
Atu6117 -0.5 -1.6 NTP pyrophosphohydrolase, MutT family compare
Atu2832 -0.5 -1.9 tRNA modification GTPase compare
Atu4873 -0.5 -2.5 TetR family transcriptional regulator compare
Atu0940 -0.5 -1.6 PemK protein compare
Atu1874 -0.5 -1.7 RecA protein compare
Atu2804 -0.5 -3.5 cobaltochelatase subunit compare
Atu0601 -0.5 -3.4 oxidoreductase compare
Atu2057 -0.5 -1.4 DNA helicase II compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source L-Asparagine in Agrobacterium fabrum C58

For nitrogen source L-Asparagine across organisms