Experiment set3IT047 for Agrobacterium fabrum C58

Compare to:

L-Cysteine hydrochloride monohydrate nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu0679 -6.6 -6.4 ATP phosphoribosyltransferase compare
Atu0038 -5.8 -6.9 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0017 -5.7 -3.9 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu3706 -5.5 -9.8 D-3-phosphoglycerate dehydrogenase compare
Atu3707 -5.3 -5.2 phosphoserine aminotransferase compare
Atu0099 -5.3 -14.9 prephenate dehydratase compare
Atu4089 -5.3 -17.3 ABC transporter permease compare
Atu1030 -5.0 -3.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu4092 -5.0 -16.2 cytochrome d oxidase subunit II compare
Atu4091 -5.0 -15.0 cytochrome d oxidase compare
Atu1845 -5.0 -5.0 phosphoribosylformylglycinamidine synthase I compare
Atu4090 -5.0 -19.7 ABC transporter permease compare
Atu1687 -4.9 -13.5 anthranilate phosphoribosyltransferase compare
Atu1750 -4.7 -7.8 phosphoribosyl c-AMP cyclohydrolase compare
Atu2791 -4.7 -7.8 3-isopropylmalate dehydrogenase compare
Atu0678 -4.7 -7.2 histidyl-tRNA synthetase compare
Atu4081 -4.7 -12.8 aspartate racemase compare
Atu2264 -4.7 -16.7 2-isopropylmalate synthase compare
Atu1688 -4.7 -8.4 indole-3-glycerol-phosphate synthase compare
Atu2289 -4.6 -17.5 anthranilate synthase component I and II compare
Atu8036 -4.6 -5.1 protein YBGT-like protein compare
Atu2709 -4.5 -20.6 3-isopropylmalate dehydratase, large subunit compare
Atu2790 -4.4 -3.8 3-isopropylmalate dehydratase, small subunit compare
Atu0039 -4.4 -3.0 imidazoleglycerol-phosphate synthase cyclase compare
Atu4082 -4.4 -12.4 AsnC family transcriptional regulator compare
Atu4505 -4.3 -14.4 LacI family transcriptional regulator compare
Atu0486 -4.3 -5.8 dihydroorotate dehydrogenase compare
Atu3739 -4.2 -4.5 phosphoglycerate kinase compare
Atu0041 -4.2 -4.1 glutamine amidotransferase compare
Atu3740 -4.1 -13.1 fructose bisphosphate aldolase compare
Atu0035 -4.0 -10.2 phosphoenolpyruvate carboxykinase compare
Atu1205 -3.9 -17.1 threonine dehydratase compare
Atu0537 -3.8 -8.8 histidinol dehydrogenase compare
Atu2650 -3.8 -11.2 glycerol-3-phosphate dehydrogenase compare
Atu0043 -3.7 -3.5 imidazoleglycerol-phosphate dehydratase compare
Atu1620 -3.6 -11.4 triosephosphate isomerase compare
Atu1588 -3.5 -12.8 homoserine dehydrogenase compare
Atu0298 -3.5 -9.9 orotidine 5 compare
Atu1446 -3.4 -3.5 two component response regulator compare
Atu2036 -3.4 -15.8 acetolactate synthase III, large subunit compare
Atu1850 -3.4 -6.4 phosphoribosylformylglycinamidine synthetase II compare
Atu2040 -3.4 -6.0 phosphoserine phosphatase compare
Atu0399 -3.3 -8.7 dihydroorotase compare
Atu1140 -3.2 -7.9 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1141 -3.2 -7.5 Phosphoribosylglycinamide synthetase compare
Atu1075 -3.1 -9.9 amidophosphoribosyltransferase compare
Atu1308 -3.1 -8.4 aspartate carbamoyl transferase catalytic subunit compare
Atu0400 -3.1 -6.7 orotate phosphoribosyltransferase compare
Atu3754 -3.0 -6.3 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3469 -3.0 -4.1 phosphoglyceromutase compare
Atu1844 -3.0 -4.3 Phosphoribosylformylglycinamidine synthetase compare
Atu3885 -3.0 -11.3 inositol monophosphatase compare
Atu1307 -3.0 -7.2 dihydroorotase compare
Atu3755 -2.9 -4.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu4773 -2.9 -3.3 two component response regulator compare
Atu0346 -2.8 -5.9 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2718 -2.7 -8.6 homoserine O-succinyltransferase compare
Atu1359 -2.6 -1.9 dnaK deletion suppressor protein compare
Atu0251 -2.6 -16.2 hypothetical protein compare
Atu0647 -2.6 -8.1 phosphoribosylamine--glycine ligase compare
Atu2640 -2.5 -6.9 hypothetical protein compare
Atu3298 -2.4 -12.3 C4-dicarboxylate transporter DctA compare
Atu3296 -2.3 -10.4 two component response regulator for C4-dicarboxylate transport compare
Atu2115 -2.3 -10.3 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu1445 -2.2 -8.0 two component sensor kinase compare
Atu2015 -2.2 -11.8 aminotransferase compare
Atu6098 -2.2 -1.3 transcriptional regulator, HTH family compare
Atu3297 -2.2 -11.0 two component sensor kinase for C4-dicarboxylate transport compare
Atu3783 -2.1 -13.1 glutamate synthase subunit beta compare
Atu3784 -2.0 -16.4 glutamate synthase large subunit compare
Atu0422 -2.0 -3.2 ABC transporter, membrane spanning protein compare
Atu1589 -1.9 -7.4 aminotransferase, class I compare
Atu0332 -1.9 -9.9 RNA polymerase sigma-54 factor compare
Atu4711 -1.8 -9.3 two component sensor kinase compare
Atu1686 -1.8 -11.9 peptidyl-prolyl cis-trans isomerse D compare
Atu3483 -1.6 -5.1 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1028 -1.6 -3.8 hypothetical protein compare
Atu4096 -1.5 -8.2 nicotinate-nucleotide pyrophosphorylase compare
Atu3730 -1.4 -1.8 hypothetical protein compare
Atu0040 -1.4 -1.3 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0029 -1.3 -5.2 S-adenosylhomocysteine hydrolase compare
Atu4098 -1.3 -8.9 quinolinate synthetase compare
Atu4317 -1.3 -4.4 TetR family transcriptional regulator compare
Atu3482 -1.3 -8.2 pantoate--beta-alanine ligase compare
Atu2207 -1.3 -3.9 two component sensor kinase compare
Atu3290 -1.2 -7.3 phosphomethylpyrimidine kinase compare
Atu2548 -1.2 -8.2 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu6114 -1.2 -1.5 hypothetical protein compare
Atu3908 -1.2 -6.9 GntR family transcriptional regulator compare
Atu2083 -1.1 -4.2 DNA repair protein RecN compare
Atu0977 -1.1 -3.0 serine protease DO-like protease compare
Atu0978 -1.1 -6.8 two component response regulator compare
Atu2376 -1.1 -0.9 hypothetical protein compare
Atu4088 -1.1 -3.2 transcriptional regulator compare
Atu3663 -1.1 -1.8 hypothetical protein compare
Atu0434 -1.1 -1.2 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0361 -1.1 -2.9 transcriptional regulator compare
Atu8052 -1.1 -1.0 hypothetical protein compare
Atu0030 -1.0 -1.5 phosphocarrier protein HPr compare
Atu4097 -1.0 -5.2 L-aspartate oxidase compare
Atu1327 -1.0 -3.1 NADH-ubiquinone oxidoreductase compare
Atu0354 -1.0 -1.7 ferric uptake regulator compare
Atu3289 -1.0 -2.6 thiamine-phosphate pyrophosphorylase compare
Atu3910 -1.0 -5.3 LamB/YcsF family protein compare
Atu8115 -1.0 -4.2 Hypothetical Protein compare
Atu1364 -1.0 -4.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0421 -0.9 -1.4 ABC transporter, membrane spanning protein compare
Atu4217 -0.9 -1.9 TetR family transcriptional regulator compare
Atu3912 -0.9 -5.1 hypothetical protein compare
Atu1463 -0.9 -3.1 glycine cleavage system component H compare
Atu4166 -0.9 -2.5 UDP-glucose 4-epimerase compare
Atu1462 -0.9 -6.6 glycine cleavage system protein P2 compare
Atu3288 -0.9 -5.2 hydroxyethylthiazole kinase compare
Atu0777 -0.9 -1.0 hypothetical protein compare
Atu0031 -0.8 -1.3 PTS system, IIA component compare
Atu2569 -0.8 -6.0 thiamine biosynthesis protein compare
Atu4075 -0.8 -5.3 glycogen synthase compare
Atu0846 -0.8 -1.8 transcriptional regulator, MarR family compare
Atu1580 -0.8 -4.5 ABC transporter, nucleotide binding/ATPase protein (amino acid) compare
Atu3913 -0.8 -3.6 biotin carboxylase compare
Atu1577 -0.8 -3.5 ABC transporter, substrate binding protein (amino acid) compare
Atu3008 -0.8 -0.9 hypothetical protein compare
Atu1573 -0.8 -1.5 hypothetical protein compare
Atu0641 -0.8 -2.7 hypothetical protein compare
Atu2728 -0.8 -3.3 beta (1-->2) glucan export ATP-binding protein compare
Atu0237 -0.8 -2.5 hypothetical protein compare
Atu5114 -0.8 -2.7 hypothetical protein compare
Atu0188 -0.8 -2.0 ABC transporter, membrane spanning protein (peptide) compare
Atu3496 -0.8 -3.1 hypothetical protein compare
Atu2427 -0.7 -5.2 ABC transporter, membrane spanning protein compare
Atu8159 -0.7 -2.3 hypothetical protein compare
Atu1874 -0.7 -2.2 RecA protein compare
Atu3287 -0.7 -2.3 thiamine biosynthesis associated protein compare
Atu1770 -0.7 -4.3 glutamine synthetase compare
Atu8034 -0.7 -2.5 hypothetical protein compare
Atu0184 -0.7 -2.0 glucokinase compare
Atu4702 -0.7 -3.8 GntR family transcriptional regulator compare
Atu2163 -0.7 -1.1 hypothetical protein compare
Atu1372 -0.7 -2.4 hypothetical protein compare
Atu8138 -0.7 -1.4 hypothetical protein compare
Atu1579 -0.7 -4.3 ABC transporter, membrane spanning protein (amino acid) compare
Atu2787 -0.7 -0.9 hypothetical protein compare
Atu4161 -0.7 -1.0 hypothetical protein compare
Atu0086 -0.6 -0.9 ribosome-binding factor A compare
Atu1439 -0.6 -1.6 hypothetical protein compare
Atu0149 -0.6 -1.8 enoyl-(acyl-carrier-protein) reductase compare
Atu1464 -0.6 -3.3 glycine cleavage system T protein, aminomethyltransferase compare
Atu2757 -0.6 -3.5 nitrogen regulatory protein PII compare
Atu1503 -0.6 -0.9 hypothetical protein compare
Atu0953 -0.6 -0.9 hypothetical protein compare
Atu0986 -0.6 -1.0 hypothetical protein compare
Atu8162 -0.6 -1.0 hypothetical protein compare
Atu0419 -0.6 -1.1 two component sensor kinase compare
Atu1373 -0.6 -3.3 hypothetical protein compare
Atu2113 -0.6 -1.6 N-acetylmuramoyl-L-alanine amidase compare
Atu3413 -0.6 -2.5 AsnC family transcriptional regulator compare
Atu0781 -0.6 -2.2 hypothetical protein compare
Atu4072 -0.6 -1.3 nodulation protein N compare
Atu1444 -0.6 -2.5 nitrogen regulation protein compare
Atu1782 -0.6 -1.9 hypothetical protein compare
Atu1714 -0.6 -1.1 exonuclease III compare
Atu3120 -0.6 -1.1 hypothetical protein compare
Atu4869 -0.6 -2.4 hypothetical protein compare
Atu2077 -0.6 -1.6 DNA polymerase III, epsilon subunit compare
Atu0501 -0.6 -4.2 acyl-CoA dehydrogenase compare
Atu0979 -0.6 -2.6 two component sensor kinase compare
Atu2722 -0.6 -3.7 porin compare
Atu2426 -0.6 -3.6 ABC transporter, membrane spanning protein (branched chain amino acid) compare
Atu6165 -0.6 -0.7 hypothetical protein compare
Atu0093 -0.5 -1.8 Recombination protein compare
Atu0971 -0.5 -1.9 two component sensor kinase compare
Atu3467 -0.5 -1.9 hypothetical protein compare
Atu1774 -0.5 -2.8 ABC transporter, substrate binding protein (peptide) compare
Atu1336 -0.5 -2.2 hypothetical protein compare
Atu3731 -0.5 -3.2 5-formyltetrahydrofolate cyclo-ligase compare
Atu1737 -0.5 -1.5 hypothetical protein compare
Atu0690 -0.5 -1.4 hypothetical protein compare
Atu3727 -0.5 -2.0 hypothetical protein compare
Atu1848 -0.5 -3.1 transcriptional regulator, GntR family compare
Atu1736 -0.5 -3.6 manganese transport protein compare
Atu1039 -0.5 -1.9 DNA repair protein RecO compare
Atu2209 -0.5 -2.0 pyrroline-5-carboxylate reductase compare
Atu2424 -0.5 -2.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu1760 -0.5 -0.8 hypothetical protein compare
Atu1624 -0.5 -2.6 transcriptional regulator, TetR family compare
Atu1522 -0.5 -2.7 transcriptional regulator, LacI family compare
Atu8167 -0.5 -3.4 putative transmembrane protein compare
Atu1103 -0.5 -1.4 rRNA-adenine N6,N6-dimethyltransferase compare
Atu5468 -0.5 -0.9 hypothetical protein compare
Atu1642 -0.5 -1.3 hypothetical protein compare
Atu1437 -0.5 -3.1 hypothetical protein compare
Atu2812 -0.5 -2.5 hypothetical protein compare
Atu0533 -0.5 -0.7 putative inhibitor of septum formation compare
Atu5430 -0.5 -0.6 hypothetical protein compare
Atu8099 -0.5 -1.3 hypothetical protein compare
Atu1592 -0.5 -2.0 hypothetical protein compare
Atu3264 -0.5 -2.8 IclR family transcriptional regulator compare
Atu8093 -0.5 -2.2 hypothetical protein compare
Atu1578 -0.5 -2.6 ABC transporter, membrane spanning protein (amino acid) compare
Atu5489 -0.5 -1.1 hypothetical protein compare


Specific Phenotypes

For 11 genes in this experiment

For nitrogen source L-Cysteine hydrochloride monohydrate in Agrobacterium fabrum C58

For nitrogen source L-Cysteine hydrochloride monohydrate across organisms