Experiment set3IT045 for Agrobacterium fabrum C58

Compare to:

L-Ornithine nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu0041 -4.4 -3.0 glutamine amidotransferase compare
Atu1030 -4.4 -3.0 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1359 -4.4 -1.9 dnaK deletion suppressor protein compare
Atu3469 -3.9 -4.6 phosphoglyceromutase compare
Atu1750 -3.9 -6.3 phosphoribosyl c-AMP cyclohydrolase compare
Atu3707 -3.9 -5.6 phosphoserine aminotransferase compare
Atu0043 -3.8 -3.7 imidazoleglycerol-phosphate dehydratase compare
Atu0332 -3.7 -10.4 RNA polymerase sigma-54 factor compare
Atu0017 -3.7 -4.3 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2040 -3.6 -5.9 phosphoserine phosphatase compare
Atu0678 -3.6 -6.7 histidyl-tRNA synthetase compare
Atu1446 -3.6 -4.2 two component response regulator compare
Atu0537 -3.4 -6.8 histidinol dehydrogenase compare
Atu2747 -3.3 -11.7 hypothetical protein compare
Atu0035 -3.3 -9.5 phosphoenolpyruvate carboxykinase compare
Atu0099 -3.3 -11.8 prephenate dehydratase compare
Atu0400 -3.3 -6.3 orotate phosphoribosyltransferase compare
Atu3706 -3.3 -12.1 D-3-phosphoglycerate dehydrogenase compare
Atu1445 -3.2 -6.9 two component sensor kinase compare
Atu0399 -3.2 -8.0 dihydroorotase compare
Atu1688 -3.1 -8.7 indole-3-glycerol-phosphate synthase compare
Atu0486 -3.1 -5.9 dihydroorotate dehydrogenase compare
Atu0679 -3.0 -5.6 ATP phosphoribosyltransferase compare
Atu3300 -2.8 -12.6 aminotransferase compare
Atu2036 -2.7 -16.5 acetolactate synthase III, large subunit compare
Atu2289 -2.7 -17.9 anthranilate synthase component I and II compare
Atu2650 -2.6 -13.2 glycerol-3-phosphate dehydrogenase compare
Atu0654 -2.6 -9.0 transcriptional regulator, LysR family compare
Atu1844 -2.5 -3.7 Phosphoribosylformylglycinamidine synthetase compare
Atu0298 -2.5 -6.2 orotidine 5 compare
Atu3739 -2.3 -4.4 phosphoglycerate kinase compare
Atu2207 -2.2 -2.6 two component sensor kinase compare
Atu1687 -2.2 -8.9 anthranilate phosphoribosyltransferase compare
Atu8135 -2.2 -6.5 hypothetical protein compare
Atu1845 -2.1 -7.1 phosphoribosylformylglycinamidine synthase I compare
Atu3754 -2.1 -9.2 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3730 -1.9 -2.7 hypothetical protein compare
Atu1850 -1.9 -3.5 phosphoribosylformylglycinamidine synthetase II compare
Atu1140 -1.8 -5.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2264 -1.8 -9.3 2-isopropylmalate synthase compare
Atu2783 -1.8 -4.2 acetyltransferase compare
Atu3740 -1.8 -8.5 fructose bisphosphate aldolase compare
Atu3885 -1.7 -9.1 inositol monophosphatase compare
Atu2718 -1.7 -6.8 homoserine O-succinyltransferase compare
Atu2155 -1.7 -13.3 methionine synthase compare
Atu2407 -1.7 -2.9 urease gamma subunit compare
Atu2790 -1.7 -3.0 3-isopropylmalate dehydratase, small subunit compare
Atu5142 -1.7 -2.0 hypothetical protein compare
Atu4505 -1.7 -11.0 LacI family transcriptional regulator compare
Atu3794 -1.6 -8.8 FadR family transcriptional regulator compare
Atu2397 -1.6 -8.7 urease accessory protein compare
Atu2408 -1.6 -8.8 urease accessory protein compare
Atu1141 -1.6 -5.8 Phosphoribosylglycinamide synthetase compare
Atu2401 -1.6 -10.5 urease alpha subunit compare
Atu0189 -1.5 -3.2 ABC transporter, membrane spanning protein (peptide) compare
Atu2791 -1.5 -6.3 3-isopropylmalate dehydrogenase compare
Atu1588 -1.5 -7.5 homoserine dehydrogenase compare
Atu2396 -1.5 -3.2 urease accessory protein compare
Atu1629 -1.5 -1.6 transcriptional regulator, ArsR family compare
Atu1570 -1.5 -1.2 hypothetical protein compare
Atu1714 -1.5 -2.1 exonuclease III compare
Atu0040 -1.4 -1.2 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3755 -1.4 -4.0 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu4610 -1.4 -8.6 sugar nucleotide epimerase/dehydratase compare
Atu3301 -1.4 -5.2 short-chain alcohol dehydrogenase compare
Atu2163 -1.4 -2.4 hypothetical protein compare
Atu0086 -1.4 -1.4 ribosome-binding factor A compare
Atu2709 -1.4 -10.0 3-isopropylmalate dehydratase, large subunit compare
Atu4317 -1.3 -4.6 TetR family transcriptional regulator compare
Atu1075 -1.3 -4.6 amidophosphoribosyltransferase compare
Atu5010 -1.3 -1.6 hypothetical protein compare
Atu0432 -1.3 -4.7 O-succinylhomoserine sulfhydrylase compare
Atu2376 -1.3 -2.1 hypothetical protein compare
Atu0647 -1.3 -3.8 phosphoribosylamine--glycine ligase compare
Atu5007 -1.2 -3.1 santhopine-responsive transcriptional repressor compare
Atu3468 -1.2 -1.4 hypothetical protein compare
Atu1205 -1.2 -6.6 threonine dehydratase compare
Atu0039 -1.2 -1.8 imidazoleglycerol-phosphate synthase cyclase compare
Atu2758 -1.2 -7.7 ammonium transporter compare
Atu8088 -1.2 -2.2 hypothetical protein compare
Atu2433 -1.2 -1.5 hypothetical protein compare
Atu0886 -1.1 -0.8 hypothetical protein compare
Atu0038 -1.1 -2.5 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2057 -1.1 -3.2 DNA helicase II compare
Atu0422 -1.1 -2.0 ABC transporter, membrane spanning protein compare
Atu2684 -1.1 -1.6 hypothetical protein compare
Atu5146 -1.1 -0.8 hypothetical protein compare
Atu1308 -1.1 -4.2 aspartate carbamoyl transferase catalytic subunit compare
Atu5517 -1.1 -1.5 hypothetical protein compare
Atu5145 -1.1 -2.1 acetyltransferase compare
Atu1103 -1.1 -2.8 rRNA-adenine N6,N6-dimethyltransferase compare
Atu4007 -1.0 -6.9 arginase compare
Atu3291 -1.0 -3.8 Lpr family transcriptional regulator compare
Atu2404 -1.0 -4.4 hypothetical protein compare
Atu3293 -1.0 -6.0 D-amino acid dehydrogenase small subunit compare
Atu0152 -1.0 -1.8 hypothetical protein compare
Atu2803 -1.0 -3.3 Cobalamin biosynthesis associated protein compare
Atu5088 -0.9 -1.1 hypothetical protein compare
Atu4157 -0.9 -8.1 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase compare
Atu2398 -0.9 -4.2 urease accessory protein compare
Atu0346 -0.9 -3.2 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2200 -0.9 -3.0 cold shock protein compare
Atu2640 -0.9 -2.8 hypothetical protein compare
Atu2123 -0.9 -3.5 methylenetetrahydrofolate reductase compare
Atu4711 -0.9 -4.9 two component sensor kinase compare
Atu0031 -0.9 -1.1 PTS system, IIA component compare
Atu3008 -0.9 -1.1 hypothetical protein compare
Atu0331 -0.9 -2.4 sigma-54 modulation protein compare
Atu5155 -0.9 -2.2 MarR family transcriptional regulator compare
Atu3009 -0.9 -1.4 exopolysaccharide production protein compare
Atu3731 -0.9 -5.2 5-formyltetrahydrofolate cyclo-ligase compare
Atu1456 -0.9 -5.0 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu5502 -0.8 -2.2 hypothetical protein compare
Atu2787 -0.8 -0.9 hypothetical protein compare
Atu4166 -0.8 -1.7 UDP-glucose 4-epimerase compare
Atu1774 -0.8 -4.5 ABC transporter, substrate binding protein (peptide) compare
Atu1439 -0.8 -1.7 hypothetical protein compare
Atu3012 -0.8 -1.3 hypothetical protein compare
Atu0977 -0.8 -2.2 serine protease DO-like protease compare
Atu2789 -0.8 -2.1 hypothetical protein compare
Atu1369 -0.8 -1.7 HIT family protein compare
Atu2083 -0.8 -2.9 DNA repair protein RecN compare
Atu5171 -0.8 -2.8 type IV secretion protein AvhB10 compare
Atu0529 -0.8 -4.3 aspartate transaminase compare
Atu3759 -0.8 -1.6 hypothetical protein compare
Atu1455 -0.8 -2.5 hypothetical protein compare
Atu0883 -0.8 -1.8 hypothetical protein compare
Atu3697 -0.8 -2.4 ATP-dependent protease LA 2 compare
Atu0837 -0.8 -4.0 transcriptional regulator, MarR family compare
Atu2729 -0.8 -1.9 hypothetical protein compare
Atu1232 -0.8 -1.7 hypothetical protein compare
Atu1354 -0.8 -0.9 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu4873 -0.8 -3.9 TetR family transcriptional regulator compare
Atu2762 -0.8 -2.0 hypothetical protein compare
Atu8034 -0.7 -3.6 hypothetical protein compare
Atu1028 -0.7 -1.4 hypothetical protein compare
Atu1642 -0.7 -1.7 hypothetical protein compare
Atu2799 -0.7 -3.0 precorrin-6x reductase compare
Atu2798 -0.7 -2.7 precorrin-6y methyltransferase compare
Atu8052 -0.7 -0.6 hypothetical protein compare
Atu1447 -0.7 -1.9 two component sensor kinase compare
Atu1795 -0.7 -2.9 malonate transporter compare
Atu3482 -0.7 -5.3 pantoate--beta-alanine ligase compare
Atu2125 -0.7 -0.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu0893 -0.7 -2.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu2809 -0.7 -3.7 cobalamin biosynthesis protein compare
Atu0677 -0.7 -1.4 hypothetical protein compare
Atu5542 -0.7 -2.5 hypothetical protein compare
Atu2818 -0.7 -3.7 ABC transporter, membrane spanning protein (ribose) compare
Atu0361 -0.7 -1.2 transcriptional regulator compare
Atu2757 -0.7 -2.8 nitrogen regulatory protein PII compare
Atu2792 -0.7 -4.1 hypothetical protein compare
Atu2786 -0.7 -3.0 hypothetical protein compare
Atu0025 -0.7 -1.2 hypothetical protein compare
Atu3292 -0.7 -4.7 alanine racemase compare
Atu0188 -0.7 -2.0 ABC transporter, membrane spanning protein (peptide) compare
Atu0580 -0.7 -2.2 flagellar biosynthetic protein compare
Atu3031 -0.6 -1.2 hypothetical protein compare
Atu4702 -0.6 -3.5 GntR family transcriptional regulator compare
Atu5125 -0.6 -1.4 GntR family transcriptional regulator compare
Atu3024 -0.6 -5.2 sugar ABC transporter permease compare
Atu0817 -0.6 -4.1 sulfate adenylate transferase, subunit 2 compare
Atu0739 -0.6 -2.3 hypothetical protein compare
Atu1689 -0.6 -2.5 molybdenum cofactor biosynthesis protein C compare
Atu2462 -0.6 -1.9 hypothetical protein compare
Atu3028 -0.6 -3.9 hypothetical protein compare
Atu3763 -0.6 -0.6 hypothetical protein compare
Atu4877 -0.6 -4.0 short-chain dehydrogenase compare
Atu4867 -0.6 -4.3 hypothetical protein compare
Atu4677 -0.6 -1.0 hypothetical protein compare
Atu1781 -0.6 -2.6 hypothetical protein compare
Atu0746 -0.6 -1.7 hypothetical protein compare
Atu5158 -0.6 -1.4 hypothetical protein compare
Atu6126 -0.6 -2.1 conjugal transfer protein, Dtr system compare
Atu5115 -0.6 -0.5 hypothetical protein compare
Atu5429 -0.6 -1.6 transcriptional regulator compare
Atu0413 -0.6 -0.9 stress induced protein compare
Atu3668 -0.6 -1.3 siderophore biosynthesis protein compare
Atu1444 -0.6 -1.8 nitrogen regulation protein compare
Atu1737 -0.6 -1.4 hypothetical protein compare
Atu8093 -0.6 -3.0 hypothetical protein compare
Atu4498 -0.6 -2.9 hypothetical protein compare
Atu0680 -0.6 -2.4 hypothetical protein compare
Atu2352 -0.6 -1.2 hypothetical protein compare
Atu3036 -0.6 -3.1 dipeptide ABC transporter permease compare
Atu0277 -0.6 -2.5 hypothetical protein compare
Atu5159 -0.6 -1.3 hypothetical protein compare
Atu2436 -0.6 -2.0 hypothetical protein compare
Atu0538 -0.6 -1.8 hypothetical protein compare
Atu4290 -0.6 -1.3 hypothetical protein compare
Atu1123 -0.6 -2.0 hypothetical protein compare
Atu4870 -0.6 -3.8 NADP-dependent quinone oxidoreductase compare
Atu4862 -0.6 -4.5 IS21 family transposase compare
Atu5160 -0.6 -1.3 transcriptional regulator protein compare
Atu5077 -0.6 -1.7 hypothetical protein compare
Atu1026 -0.6 -1.3 hypothetical protein compare
Atu1303 -0.6 -3.9 exoribonuclease compare
Atu0463 -0.6 -1.5 hypothetical protein compare
Atu2204 -0.6 -1.7 hypothetical protein compare
Atu6159 -0.6 -1.2 hypothetical protein compare


Specific Phenotypes

For 10 genes in this experiment

For nitrogen source L-Ornithine in Agrobacterium fabrum C58

For nitrogen source L-Ornithine across organisms