Experiment set3IT044 for Echinicola vietnamensis KMM 6221, DSM 17526

Compare to:

L-tyrosine disodium salt nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
Echvi_2193 +5.9 52.6 Transcriptional regulators compare
Echvi_1881 +4.5 19.0 ADP-ribose pyrophosphatase compare
Echvi_3918 +4.5 6.4 Histone H1-like protein Hc1. compare
Echvi_2217 +3.7 8.0 hypothetical protein compare
Echvi_2373 +3.7 17.3 hypothetical protein compare
Echvi_2962 +3.5 26.2 Undecaprenyl-phosphate glucose phosphotransferase compare
Echvi_2047 +3.5 18.6 RNA polymerase sigma factor, sigma-70 family compare
Echvi_2474 +3.4 22.8 Diaminopimelate decarboxylase compare
Echvi_2961 +3.3 14.8 hypothetical protein compare
Echvi_1747 +3.2 21.0 amino acid carrier protein compare
Echvi_3853 +3.1 4.5 Predicted transcriptional regulators compare
Echvi_4410 +3.0 21.3 nucleotide sugar dehydrogenase compare
Echvi_3336 +3.0 15.3 hypothetical protein compare
Echvi_2356 +3.0 12.6 MiaB-like tRNA modifying enzyme compare
Echvi_2730 +2.8 20.0 bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family compare
Echvi_3478 +2.8 13.5 Cell division protein compare
Echvi_0662 +2.8 17.8 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) compare
Echvi_4397 +2.6 19.9 Nucleoside-diphosphate-sugar epimerases compare
Echvi_3884 +2.5 22.3 Signal transduction histidine kinase compare
Echvi_4396 +2.5 15.8 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis compare
Echvi_0986 +2.4 9.3 Rrf2 family protein compare
Echvi_3910 +2.4 13.3 Transcriptional regulator/sugar kinase compare
Echvi_1146 +2.1 6.2 Predicted membrane protein compare
Echvi_1900 +2.1 3.6 nitrite reductase [NAD(P)H], small subunit compare
Echvi_3300 +2.1 10.3 hypothetical protein compare
Echvi_0201 +2.0 10.5 alanine dehydrogenase compare
Echvi_1200 +2.0 8.5 Predicted membrane protein compare
Echvi_3296 +2.0 5.5 Deoxyhypusine synthase compare
Echvi_4048 +2.0 3.9 hypothetical protein compare
Echvi_2744 +1.9 9.5 Beta-xylosidase compare
Echvi_0613 +1.9 7.2 hypothetical protein compare
Echvi_2853 +1.9 7.7 Fe2+-dicitrate sensor, membrane component compare
Echvi_1822 +1.8 3.1 ubiquinone/menaquinone biosynthesis methyltransferases compare
Echvi_0642 +1.8 7.6 pseudouridine synthase, RluA family compare
Echvi_1748 +1.7 7.2 hypothetical protein compare
Echvi_0594 +1.7 6.4 hypoxanthine phosphoribosyltransferase compare
Echvi_0540 +1.7 6.7 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family compare
Echvi_4080 +1.7 2.0 hypothetical protein compare
Echvi_3549 +1.6 6.2 Mn-dependent transcriptional regulator compare
Echvi_1864 +1.6 10.6 Transcriptional regulators compare
Echvi_2108 +1.6 4.0 Predicted small integral membrane protein compare
Echvi_2779 +1.6 2.4 hypothetical protein compare
Echvi_2970 +1.6 8.6 hypothetical protein compare
Echvi_4161 +1.6 2.5 hypothetical protein compare
Echvi_3864 +1.6 8.9 Glycosyltransferase compare
Echvi_2537 +1.5 11.2 cation diffusion facilitator family transporter compare
Echvi_2498 +1.5 3.5 Predicted ATPase involved in cell division compare
Echvi_4047 +1.5 2.5 hypothetical protein compare
Echvi_3057 +1.5 2.2 citrate synthase I (hexameric type) compare
Echvi_4576 +1.5 5.8 FOG: CheY-like receiver compare
Echvi_3914 +1.5 13.3 Transcriptional regulators compare
Echvi_3744 +1.5 5.0 hypothetical protein compare
Echvi_4573 +1.5 8.6 Glycosyltransferases, probably involved in cell wall biogenesis compare
Echvi_3894 +1.4 7.3 Transcriptional regulator/sugar kinase compare
Echvi_0887 +1.4 11.4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Echvi_2270 +1.4 7.9 His Kinase A (phosphoacceptor) domain./7TM diverse intracellular signalling./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. compare
Echvi_0626 +1.4 7.3 hypothetical protein compare
Echvi_0696 +1.4 4.0 galactokinase compare
Echvi_0114 +1.4 4.3 N-acetylmuramoyl-L-alanine amidase compare
Echvi_4050 +1.4 2.7 hypothetical protein compare
Echvi_2296 +1.4 9.7 Arabinose efflux permease compare
Echvi_3911 +1.3 9.9 alpha-1,2-mannosidase, putative compare
Echvi_2606 +1.3 1.8 hypothetical protein compare
Echvi_2836 +1.3 6.1 hypothetical protein compare
Echvi_0579 +1.3 8.7 ammonium transporter compare
Echvi_1870 +1.3 8.1 hypothetical protein compare
Echvi_2968 +1.3 7.4 Predicted xylanase/chitin deacetylase compare
Echvi_2912 +1.3 8.2 Kef-type K+ transport systems, membrane components compare
Echvi_2967 +1.3 6.3 Glycosyltransferase compare
Echvi_1869 +1.3 5.5 mannonate dehydratase compare
Echvi_0339 +1.3 6.3 Tetratricopeptide repeat. compare
Echvi_0180 +1.3 2.3 transcription elongation factor GreA compare
Echvi_2529 +1.3 8.4 Acyl-CoA reductase (LuxC). compare
Echvi_0009 +1.3 7.6 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase compare
Echvi_0438 +1.3 1.8 hypothetical protein compare
Echvi_2969 +1.3 7.8 hypothetical protein compare
Echvi_1719 +1.3 2.1 hypothetical protein compare
Echvi_1327 +1.2 5.0 endoribonuclease L-PSP, putative compare
Echvi_2731 +1.2 5.1 Glycosyltransferase compare
Echvi_2984 +1.2 4.3 hypothetical protein compare
Echvi_3800 +1.2 1.2 hypothetical protein compare
Echvi_4582 +1.2 4.6 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Echvi_2005 +1.2 3.8 hypothetical protein compare
Echvi_2966 +1.2 7.4 Glycosyltransferase compare
Echvi_1054 +1.2 4.4 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit compare
Echvi_3983 +1.2 7.3 Transcriptional regulator/sugar kinase compare
Echvi_2298 +1.2 1.8 hypothetical protein compare
Echvi_3442 +1.2 5.1 Putative transcriptional regulator compare
Echvi_3389 +1.2 6.3 Family of unknown function (DUF706). compare
Echvi_2955 +1.2 2.4 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Echvi_1491 +1.2 1.5 export-related chaperone CsaA compare
Echvi_1218 +1.2 7.2 aspartate kinase compare
Echvi_2274 +1.2 7.4 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Echvi_0542 +1.1 6.7 RND family efflux transporter, MFP subunit compare
Echvi_0539 +1.1 2.7 Protein of unknown function (DUF3037). compare
Echvi_2810 +1.1 6.7 MFS transporter, sugar porter (SP) family compare
Echvi_1868 +1.1 3.9 hypothetical protein compare
Echvi_4392 +1.1 8.7 Glycosyltransferases involved in cell wall biogenesis compare
Echvi_1742 +1.1 1.7 Uncharacterized protein conserved in archaea compare
Echvi_0006 +1.1 4.0 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems compare
Echvi_4374 +1.1 5.8 Thiol-disulfide isomerase and thioredoxins compare
Echvi_4639 +1.1 9.5 TonB-linked outer membrane protein, SusC/RagA family compare
Echvi_2536 +1.1 3.0 arsenate reductase (glutaredoxin) compare
Echvi_1538 +1.1 7.4 hypothetical protein compare
Echvi_3483 +1.1 5.5 tRNA (guanine-N(7)-)-methyltransferase compare
Echvi_0007 +1.1 4.0 Cytochrome c, mono- and diheme variants compare
Echvi_2805 +1.1 6.2 MFS transporter, sugar porter (SP) family compare
Echvi_1854 +1.1 2.0 tRNA compare
Echvi_3605 +1.1 4.6 Phospholipid N-methyltransferase compare
Echvi_4659 +1.1 2.5 hypothetical protein compare
Echvi_0158 +1.1 5.8 Predicted phosphosugar isomerases compare
Echvi_0340 +1.0 2.6 ADP-ribose pyrophosphatase compare
Echvi_4561 +1.0 2.0 hypothetical protein compare
Echvi_3392 +1.0 5.1 SusD family. compare
Echvi_2489 +1.0 5.3 Uncharacterized protein conserved in bacteria compare
Echvi_2870 +1.0 7.6 hypothetical protein compare
Echvi_2004 +1.0 5.0 Predicted transcriptional regulator compare
Echvi_3262 +1.0 1.7 hypothetical protein compare
Echvi_3472 +1.0 4.9 Universal stress protein UspA and related nucleotide-binding proteins compare
Echvi_3394 +1.0 6.3 Secreted and surface protein containing fasciclin-like repeats compare
Echvi_4527 +1.0 2.5 Plasmid stabilization system protein compare
Echvi_3645 +1.0 7.5 Isocitrate dehydrogenase kinase/phosphatase compare
Echvi_4391 +1.0 8.8 Nucleoside-diphosphate-sugar epimerases compare
Echvi_0985 +1.0 3.1 Predicted membrane protein compare
Echvi_3347 +1.0 0.9 hypothetical protein compare
Echvi_2817 +1.0 5.7 Na+/H+ antiporter NhaC compare
Echvi_3195 +1.0 1.1 hypothetical protein compare
Echvi_3938 +1.0 3.2 hypothetical protein compare
Echvi_1728 +1.0 2.5 pseudouridylate synthase I compare
Echvi_1830 +0.9 6.6 hypothetical protein compare
Echvi_1764 +0.9 2.0 hypothetical protein compare
Echvi_4415 +0.9 5.1 Transcription antiterminator compare
Echvi_0541 +0.9 6.0 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family compare
Echvi_4581 +0.9 3.5 hypothetical protein compare
Echvi_4411 +0.9 3.4 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Echvi_2232 +0.9 2.1 Uncharacterized small membrane protein compare
Echvi_1158 +0.9 5.2 nicotinate-nucleotide pyrophosphorylase compare
Echvi_4055 +0.9 2.2 Uncharacterized protein involved in copper resistance compare
Echvi_0584 +0.9 5.0 peptide chain release factor 3 compare
Echvi_4076 +0.9 3.8 Membrane-bound metallopeptidase compare
Echvi_3893 +0.9 4.1 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase compare
Echvi_0798 +0.9 3.1 hypothetical protein compare
Echvi_2808 +0.9 5.7 SusD family. compare
Echvi_1380 +0.9 3.5 Fe2+-dicitrate sensor, membrane component compare
Echvi_4589 +0.9 1.9 MoxR-like ATPases compare
Echvi_3393 +0.9 4.8 Secreted and surface protein containing fasciclin-like repeats compare
Echvi_2208 +0.9 2.0 Truncated hemoglobins compare
Echvi_2008 +0.9 5.6 Signal transduction histidine kinase compare
Echvi_1796 +0.9 6.1 ATPase components of ABC transporters with duplicated ATPase domains compare
Echvi_4248 +0.9 2.2 hypothetical protein compare
Echvi_3960 +0.9 1.4 Histone H1-like protein Hc1. compare
Echvi_3005 +0.9 4.8 hypothetical protein compare
Echvi_4114 +0.9 3.0 hypothetical protein compare
Echvi_2365 +0.9 1.8 Response regulator containing a CheY-like receiver domain and an HD-GYP domain compare
Echvi_4595 +0.9 1.0 hypothetical protein compare
Echvi_1356 +0.9 1.3 hypothetical protein compare
Echvi_0615 +0.9 2.6 Integral membrane protein CcmA involved in cell shape determination compare
Echvi_1419 +0.8 2.4 Predicted enzyme related to lactoylglutathione lyase compare
Echvi_1477 +0.8 5.4 phytoene desaturase compare
Echvi_4638 +0.8 7.0 SusD family. compare
Echvi_4255 +0.8 4.2 SusD family. compare
Echvi_2743 +0.8 2.6 hypothetical protein compare
Echvi_3396 +0.8 4.6 SusD family. compare
Echvi_1302 +0.8 2.2 Predicted transcriptional regulators compare
Echvi_4594 +0.8 4.9 Xaa-Pro aminopeptidase compare
Echvi_1632 +0.8 3.8 Endoglucanase compare
Echvi_2046 +0.8 3.7 16S rRNA (guanine(527)-N(7))-methyltransferase GidB compare
Echvi_3512 +0.8 1.4 DNA binding domain, excisionase family compare
Echvi_1148 +0.8 4.8 Tetratricopeptide repeat. compare
Echvi_4551 +0.8 1.9 hypothetical protein compare
Echvi_1228 +0.8 3.3 Putative homoserine kinase type II (protein kinase fold) compare
Echvi_4046 +0.8 2.2 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Echvi_0104 +0.8 1.8 Iron-sulfur cluster assembly accessory protein compare
Echvi_2679 +0.8 0.8 hypothetical protein compare
Echvi_3723 +0.8 2.3 hypothetical protein compare
Echvi_4229 +0.8 2.6 Uncharacterized conserved protein compare
Echvi_4373 +0.8 5.4 TonB-linked outer membrane protein, SusC/RagA family compare
Echvi_4674 +0.8 1.6 Nucleotidyltransferase substrate binding protein like. compare
Echvi_1787 +0.8 5.1 C-terminal peptidase (prc) compare
Echvi_3101 +0.8 3.0 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Echvi_3952 +0.8 2.1 NAD-dependent aldehyde dehydrogenases compare
Echvi_0328 +0.7 2.8 hypothetical protein compare
Echvi_1586 +0.7 1.6 hypothetical protein compare
Echvi_1247 +0.7 1.4 single stranded DNA-binding protein (ssb) compare
Echvi_2123 +0.7 3.4 ABC-type spermidine/putrescine transport systems, ATPase components compare
Echvi_1453 +0.7 2.2 Nitrogen regulatory protein PII compare
Echvi_2198 +0.7 1.1 hypothetical protein compare
Echvi_0509 +0.7 2.6 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) compare
Echvi_1022 +0.7 4.9 ABC-type spermidine/putrescine transport systems, ATPase components compare
Echvi_3283 +0.7 1.3 Lactoylglutathione lyase and related lyases compare
Echvi_0787 +0.7 6.3 TonB-linked outer membrane protein, SusC/RagA family compare
Echvi_0595 +0.7 4.8 Cellulase M and related proteins compare
Echvi_2667 +0.7 3.0 hypothetical protein compare
Echvi_0484 +0.7 1.2 hypothetical protein compare
Echvi_3055 +0.7 2.3 RNA methyltransferase, RsmE family compare
Echvi_2535 +0.7 4.4 Tetratricopeptide repeat. compare
Echvi_3240 +0.7 2.5 hypothetical protein compare
Echvi_2807 +0.7 4.0 Beta-fructosidases (levanase/invertase) compare
Echvi_1899 +0.7 4.6 hypothetical protein compare
Echvi_1844 +0.7 2.0 3-ketohexose reductase (NADH) (from data) compare


Specific Phenotypes

For 82 genes in this experiment

For nitrogen source L-tyrosine disodium salt in Echinicola vietnamensis KMM 6221, DSM 17526

For nitrogen source L-tyrosine disodium salt across organisms