Experiment set3IT043 for Agrobacterium fabrum C58

Compare to:

L-Arginine nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu1750 -6.4 -5.4 phosphoribosyl c-AMP cyclohydrolase compare
Atu3707 -6.4 -4.4 phosphoserine aminotransferase compare
Atu1446 -5.5 -3.8 two component response regulator compare
Atu2040 -5.2 -7.1 phosphoserine phosphatase compare
Atu0679 -4.8 -8.7 ATP phosphoribosyltransferase compare
Atu0678 -4.8 -6.6 histidyl-tRNA synthetase compare
Atu1030 -4.7 -3.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3706 -4.5 -11.6 D-3-phosphoglycerate dehydrogenase compare
Atu3739 -4.5 -4.7 phosphoglycerate kinase compare
Atu0035 -4.3 -9.6 phosphoenolpyruvate carboxykinase compare
Atu1687 -4.3 -12.5 anthranilate phosphoribosyltransferase compare
Atu2791 -4.2 -7.9 3-isopropylmalate dehydrogenase compare
Atu2289 -4.2 -19.3 anthranilate synthase component I and II compare
Atu0537 -4.1 -8.7 histidinol dehydrogenase compare
Atu0099 -4.1 -13.3 prephenate dehydratase compare
Atu0332 -4.1 -11.6 RNA polymerase sigma-54 factor compare
Atu0400 -3.9 -7.1 orotate phosphoribosyltransferase compare
Atu2709 -3.9 -20.0 3-isopropylmalate dehydratase, large subunit compare
Atu4505 -3.9 -15.1 LacI family transcriptional regulator compare
Atu0486 -3.9 -5.9 dihydroorotate dehydrogenase compare
Atu1688 -3.9 -9.9 indole-3-glycerol-phosphate synthase compare
Atu2264 -3.8 -13.9 2-isopropylmalate synthase compare
Atu3469 -3.7 -4.9 phosphoglyceromutase compare
Atu2036 -3.6 -15.2 acetolactate synthase III, large subunit compare
Atu2650 -3.5 -13.6 glycerol-3-phosphate dehydrogenase compare
Atu3885 -3.5 -13.3 inositol monophosphatase compare
Atu0017 -3.5 -4.7 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0298 -3.4 -9.3 orotidine 5 compare
Atu2408 -3.3 -15.4 urease accessory protein compare
Atu2397 -3.3 -15.2 urease accessory protein compare
Atu0432 -3.3 -11.2 O-succinylhomoserine sulfhydrylase compare
Atu1620 -3.2 -13.8 triosephosphate isomerase compare
Atu2790 -3.2 -3.0 3-isopropylmalate dehydratase, small subunit compare
Atu0041 -3.1 -2.6 glutamine amidotransferase compare
Atu1205 -3.1 -15.2 threonine dehydratase compare
Atu1359 -3.1 -1.9 dnaK deletion suppressor protein compare
Atu3740 -3.1 -11.1 fructose bisphosphate aldolase compare
Atu4007 -2.9 -11.8 arginase conserved
Atu0043 -2.9 -3.1 imidazoleglycerol-phosphate dehydratase compare
Atu2401 -2.9 -18.2 urease alpha subunit conserved
Atu2396 -2.8 -7.4 urease accessory protein conserved
Atu2407 -2.8 -4.1 urease gamma subunit compare
Atu2718 -2.8 -9.1 homoserine O-succinyltransferase compare
Atu1850 -2.8 -6.3 phosphoribosylformylglycinamidine synthetase II compare
Atu6098 -2.7 -1.2 transcriptional regulator, HTH family compare
Atu1844 -2.7 -3.8 Phosphoribosylformylglycinamidine synthetase compare
Atu1845 -2.7 -6.3 phosphoribosylformylglycinamidine synthase I compare
Atu0039 -2.6 -2.1 imidazoleglycerol-phosphate synthase cyclase compare
Atu0040 -2.6 -1.5 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1588 -2.6 -8.9 homoserine dehydrogenase compare
Atu3783 -2.6 -14.1 glutamate synthase subunit beta compare
Atu0038 -2.6 -6.5 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1075 -2.5 -8.6 amidophosphoribosyltransferase compare
Atu2747 -2.5 -12.2 hypothetical protein compare
Atu1141 -2.4 -8.2 Phosphoribosylglycinamide synthetase compare
Atu3754 -2.3 -8.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0399 -2.3 -6.7 dihydroorotase compare
Atu1445 -2.3 -5.9 two component sensor kinase compare
Atu2640 -2.3 -6.3 hypothetical protein compare
Atu2398 -2.3 -7.6 urease accessory protein compare
Atu3784 -2.2 -17.4 glutamate synthase large subunit compare
Atu0030 -2.1 -2.2 phosphocarrier protein HPr compare
Atu1686 -2.1 -12.4 peptidyl-prolyl cis-trans isomerse D compare
Atu2115 -2.1 -12.7 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu1308 -2.0 -5.7 aspartate carbamoyl transferase catalytic subunit compare
Atu0346 -2.0 -3.8 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu3755 -2.0 -5.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2404 -1.9 -5.5 hypothetical protein compare
Atu0647 -1.9 -4.8 phosphoribosylamine--glycine ligase compare
Atu3298 -1.8 -11.1 C4-dicarboxylate transporter DctA compare
Atu1140 -1.8 -4.0 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1307 -1.8 -6.4 dihydroorotase compare
Atu0031 -1.7 -1.9 PTS system, IIA component compare
Atu1580 -1.7 -8.9 ABC transporter, nucleotide binding/ATPase protein (amino acid) compare
Atu2155 -1.7 -13.2 methionine synthase compare
Atu3297 -1.6 -12.0 two component sensor kinase for C4-dicarboxylate transport compare
Atu3296 -1.6 -9.0 two component response regulator for C4-dicarboxylate transport compare
Atu3731 -1.6 -9.6 5-formyltetrahydrofolate cyclo-ligase compare
Atu2015 -1.5 -9.4 aminotransferase compare
Atu0769 -1.5 -2.4 protoheme IX farnesyltransferase compare
Atu0723 -1.5 -2.1 FAD dependent oxidoreductase compare
Atu3496 -1.4 -4.6 hypothetical protein compare
Atu0986 -1.4 -1.6 hypothetical protein compare
Atu4006 -1.4 -5.0 AsnC family transcriptional regulator compare
Atu3482 -1.4 -7.5 pantoate--beta-alanine ligase compare
Atu2548 -1.3 -9.0 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu8054 -1.2 -0.7 hypothetical protein compare
Atu6189 -1.2 -1.1 protein secretion chaperone compare
Atu0188 -1.2 -3.1 ABC transporter, membrane spanning protein (peptide) compare
Atu1589 -1.2 -4.2 aminotransferase, class I compare
Atu2163 -1.2 -2.1 hypothetical protein compare
Atu4217 -1.1 -2.6 TetR family transcriptional regulator compare
Atu8115 -1.1 -3.9 Hypothetical Protein compare
Atu2402 -1.1 -4.3 urease accessory protein compare
Atu3483 -1.1 -4.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu0654 -1.1 -6.0 transcriptional regulator, LysR family compare
Atu1573 -1.1 -1.8 hypothetical protein compare
Atu3300 -1.0 -6.8 aminotransferase compare
Atu1454 -1.0 -5.3 siroheme synthase compare
Atu0225 -1.0 -1.0 hypothetical protein compare
Atu1456 -1.0 -6.0 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1503 -1.0 -1.2 hypothetical protein compare
Atu3009 -1.0 -1.1 exopolysaccharide production protein compare
Atu4166 -1.0 -2.6 UDP-glucose 4-epimerase compare
Atu0361 -1.0 -2.3 transcriptional regulator compare
Atu1455 -1.0 -2.2 hypothetical protein compare
Atu1685 -1.0 -1.1 hypothetical protein compare
Atu1444 -0.9 -2.5 nitrogen regulation protein compare
Atu0777 -0.9 -0.9 hypothetical protein compare
Atu1774 -0.9 -5.6 ABC transporter, substrate binding protein (peptide) compare
Atu4173 -0.9 -2.6 phosphoenolpyruvate-protein phosphotransferase compare
Atu1579 -0.9 -4.8 ABC transporter, membrane spanning protein (amino acid) compare
Atu0837 -0.9 -3.8 transcriptional regulator, MarR family compare
Atu1577 -0.9 -3.1 ABC transporter, substrate binding protein (amino acid) compare
Atu2376 -0.9 -0.8 hypothetical protein compare
Atu2205 -0.9 -4.9 transcriptional regulator, MarR family compare
Atu5430 -0.8 -0.8 hypothetical protein compare
Atu2439 -0.8 -1.1 hypothetical protein compare
Atu2209 -0.8 -2.4 pyrroline-5-carboxylate reductase compare
Atu1028 -0.8 -2.1 hypothetical protein compare
Atu1578 -0.8 -3.4 ABC transporter, membrane spanning protein (amino acid) compare
Atu4096 -0.8 -5.4 nicotinate-nucleotide pyrophosphorylase compare
Atu8135 -0.8 -3.5 hypothetical protein compare
Atu1103 -0.8 -2.1 rRNA-adenine N6,N6-dimethyltransferase compare
Atu1508 -0.8 -3.1 hypothetical protein compare
Atu0818 -0.8 -4.2 phosphoadenosine phosphosulfate reductase compare
Atu4873 -0.7 -4.2 TetR family transcriptional regulator compare
Atu0817 -0.7 -4.7 sulfate adenylate transferase, subunit 2 compare
Atu2800 -0.7 -2.5 precorrin-3B C17-methyltransferase compare
Atu4098 -0.7 -5.5 quinolinate synthetase compare
Atu0026 -0.7 -0.9 hypothetical protein compare
Atu5164 -0.7 -0.6 type IV secretion protein AvhB3 compare
Atu3301 -0.7 -4.1 short-chain alcohol dehydrogenase compare
Atu0845 -0.7 -2.0 hypothetical protein compare
Atu0816 -0.7 -5.1 sulfate adenylate transferase, subunit 1 compare
Atu8034 -0.7 -2.4 hypothetical protein compare
Atu4053 -0.7 -1.1 succinoglycan biosynthesis protein compare
Atu3290 -0.7 -3.5 phosphomethylpyrimidine kinase compare
Atu3730 -0.7 -1.3 hypothetical protein compare
Atu3913 -0.7 -2.9 biotin carboxylase compare
Atu3012 -0.7 -1.1 hypothetical protein compare
Atu5163 -0.6 -1.6 type IV secretion protein AvhB2 compare
Atu1714 -0.6 -1.2 exonuclease III compare
Atu1457 -0.6 -1.6 hypothetical protein compare
Atu0029 -0.6 -3.1 S-adenosylhomocysteine hydrolase compare
Atu0533 -0.6 -1.3 putative inhibitor of septum formation compare
Atu3750 -0.6 -1.3 thiamine-phosphate pyrophosphorylase compare
Atu5023 -0.6 -4.8 hypothetical protein compare
Atu0190 -0.6 -3.9 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1566 -0.6 -0.8 hypothetical protein compare
Atu3908 -0.6 -4.2 GntR family transcriptional regulator compare
Atu1748 -0.6 -3.1 NIFU-like protein compare
Atu2789 -0.6 -1.6 hypothetical protein compare
Atu0690 -0.6 -1.0 hypothetical protein compare
Atu4161 -0.6 -1.0 hypothetical protein compare
Atu0339 -0.6 -1.3 hypothetical protein compare
Atu2555 -0.6 -1.8 L-lysine 2,3-aminomutase compare
Atu4097 -0.6 -3.1 L-aspartate oxidase compare
Atu2057 -0.6 -1.6 DNA helicase II compare
Atu2758 -0.6 -3.4 ammonium transporter compare
Atu1110 -0.6 -1.2 cytosol aminopeptidase compare
Atu2783 -0.6 -2.1 acetyltransferase compare
Atu4017 -0.6 -4.4 MFS permease compare
Atu2569 -0.6 -4.1 thiamine biosynthesis protein compare
Atu3912 -0.6 -3.7 hypothetical protein compare
Atu2433 -0.6 -0.9 hypothetical protein compare
Atu0566 -0.5 -0.9 hypothetical protein compare
Atu6009 -0.5 -1.9 indole-3-lactate synthase compare
Atu3663 -0.5 -1.1 hypothetical protein compare
Atu0525 -0.5 -2.1 transcriptional regulator, LuxR family compare
Atu2812 -0.5 -2.3 hypothetical protein compare
Atu2083 -0.5 -1.4 DNA repair protein RecN compare
Atu5114 -0.5 -1.6 hypothetical protein compare
Atu3121 -0.5 -1.0 cold shock protein compare
Atu4618 -0.5 -3.6 dTDP-rhamnose-3,5-epimerase compare
Atu5030 -0.5 -2.5 hypothetical protein compare
Atu4880 -0.5 -3.5 AraC family transcriptional regulator compare
Atu3598 -0.5 -1.3 thiol:disulfide interchange protein compare
Atu0421 -0.5 -0.8 ABC transporter, membrane spanning protein compare
Atu3763 -0.5 -1.2 hypothetical protein compare
Atu0696 -0.5 -2.4 phosphatase compare
Atu3291 -0.5 -2.3 Lpr family transcriptional regulator compare
Atu4711 -0.5 -2.6 two component sensor kinase compare
Atu1546 -0.5 -2.1 transcriptional regulator, MerR family compare
Atu4875 -0.5 -2.1 hypothetical protein compare
Atu4486 -0.5 -2.7 nitroreductase compare
Atu1971 -0.5 -1.6 hypothetical protein compare
Atu0702 -0.5 -1.5 calcium-binding protein, regucalcin compare
Atu2234 -0.5 -1.2 hypothetical protein compare
Atu0631 -0.5 -2.7 molybdenum cofactor biosynthesis protein B compare
Atu4879 -0.5 -2.8 hypothetical protein compare
Atu1077 -0.5 -1.5 DNA repair protein compare
Atu2172 -0.5 -3.1 multidrug efflux protein compare
Atu8151 -0.5 -1.0 hypothetical protein compare
Atu2757 -0.5 -1.9 nitrogen regulatory protein PII compare
Atu0895 -0.5 -1.3 ABC transporter, substrate binding protein compare
Atu3668 -0.4 -1.2 siderophore biosynthesis protein compare
Atu5535 -0.4 -2.1 ABC transporter nucleotide binding/ATPase compare
Atu8166 -0.4 -1.6 hypothetical protein compare
Atu8195 -0.4 -1.5 hypothetical protein compare


Specific Phenotypes

For 13 genes in this experiment

For nitrogen source L-Arginine in Agrobacterium fabrum C58

For nitrogen source L-Arginine across organisms