Experiment set3IT042 for Agrobacterium fabrum C58

Compare to:

L-Arginine nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu1446 -5.5 -3.8 two component response regulator compare
Atu0400 -5.5 -6.5 orotate phosphoribosyltransferase compare
Atu3707 -5.5 -5.1 phosphoserine aminotransferase compare
Atu2040 -5.0 -7.7 phosphoserine phosphatase compare
Atu0043 -5.0 -3.5 imidazoleglycerol-phosphate dehydratase compare
Atu0679 -4.9 -7.5 ATP phosphoribosyltransferase compare
Atu0041 -4.9 -3.4 glutamine amidotransferase compare
Atu3706 -4.9 -11.7 D-3-phosphoglycerate dehydrogenase compare
Atu2791 -4.8 -9.9 3-isopropylmalate dehydrogenase compare
Atu1030 -4.7 -3.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0017 -4.6 -4.5 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0678 -4.5 -7.5 histidyl-tRNA synthetase compare
Atu0332 -4.5 -11.6 RNA polymerase sigma-54 factor compare
Atu2036 -4.4 -18.9 acetolactate synthase III, large subunit compare
Atu2790 -4.3 -3.6 3-isopropylmalate dehydratase, small subunit compare
Atu0039 -4.2 -2.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu1687 -4.2 -10.5 anthranilate phosphoribosyltransferase compare
Atu3740 -4.2 -14.6 fructose bisphosphate aldolase compare
Atu2709 -4.1 -17.6 3-isopropylmalate dehydratase, large subunit compare
Atu3469 -4.1 -4.0 phosphoglyceromutase compare
Atu2289 -4.0 -19.2 anthranilate synthase component I and II compare
Atu0099 -4.0 -9.7 prephenate dehydratase compare
Atu0035 -4.0 -10.7 phosphoenolpyruvate carboxykinase compare
Atu0030 -4.0 -2.4 phosphocarrier protein HPr compare
Atu1688 -3.9 -10.3 indole-3-glycerol-phosphate synthase compare
Atu1750 -3.9 -5.2 phosphoribosyl c-AMP cyclohydrolase compare
Atu2264 -3.9 -17.2 2-isopropylmalate synthase compare
Atu0537 -3.7 -7.6 histidinol dehydrogenase compare
Atu2650 -3.7 -14.1 glycerol-3-phosphate dehydrogenase compare
Atu2396 -3.7 -7.4 urease accessory protein conserved
Atu4505 -3.7 -11.2 LacI family transcriptional regulator compare
Atu0298 -3.7 -9.1 orotidine 5 compare
Atu0769 -3.6 -3.4 protoheme IX farnesyltransferase compare
Atu5430 -3.6 -2.5 hypothetical protein compare
Atu2718 -3.6 -10.9 homoserine O-succinyltransferase compare
Atu3885 -3.5 -11.5 inositol monophosphatase compare
Atu1205 -3.4 -11.7 threonine dehydratase compare
Atu1140 -3.4 -5.8 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu5164 -3.4 -1.4 type IV secretion protein AvhB3 compare
Atu4007 -3.3 -13.2 arginase conserved
Atu3739 -3.2 -5.0 phosphoglycerate kinase compare
Atu2407 -3.2 -5.7 urease gamma subunit compare
Atu1620 -3.2 -12.4 triosephosphate isomerase compare
Atu2408 -3.1 -9.9 urease accessory protein compare
Atu0399 -3.0 -8.1 dihydroorotase compare
Atu2401 -3.0 -18.0 urease alpha subunit conserved
Atu0486 -3.0 -6.6 dihydroorotate dehydrogenase compare
Atu2397 -2.9 -11.0 urease accessory protein compare
Atu0038 -2.8 -4.9 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0432 -2.8 -11.1 O-succinylhomoserine sulfhydrylase compare
Atu3783 -2.7 -15.8 glutamate synthase subunit beta compare
Atu0040 -2.6 -1.5 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3754 -2.6 -8.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2747 -2.6 -15.4 hypothetical protein compare
Atu1307 -2.6 -5.4 dihydroorotase compare
Atu1588 -2.5 -9.6 homoserine dehydrogenase compare
Atu3784 -2.4 -19.8 glutamate synthase large subunit compare
Atu1845 -2.4 -4.4 phosphoribosylformylglycinamidine synthase I compare
Atu1844 -2.4 -2.6 Phosphoribosylformylglycinamidine synthetase compare
Atu1445 -2.4 -7.9 two component sensor kinase compare
Atu0346 -2.4 -3.2 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu3755 -2.4 -7.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2115 -2.3 -11.4 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu1075 -2.3 -6.2 amidophosphoribosyltransferase compare
Atu0647 -2.3 -7.7 phosphoribosylamine--glycine ligase compare
Atu2398 -2.2 -6.3 urease accessory protein compare
Atu2404 -2.1 -6.2 hypothetical protein compare
Atu1850 -2.1 -4.2 phosphoribosylformylglycinamidine synthetase II compare
Atu3296 -2.1 -9.1 two component response regulator for C4-dicarboxylate transport compare
Atu3298 -2.0 -11.6 C4-dicarboxylate transporter DctA compare
Atu8087 -2.0 -1.6 putative peptidoglycan binding protein compare
Atu0031 -2.0 -2.0 PTS system, IIA component compare
Atu1308 -1.9 -3.8 aspartate carbamoyl transferase catalytic subunit compare
Atu2640 -1.8 -5.2 hypothetical protein compare
Atu3297 -1.8 -12.1 two component sensor kinase for C4-dicarboxylate transport compare
Atu1141 -1.8 -7.3 Phosphoribosylglycinamide synthetase compare
Atu1686 -1.8 -12.3 peptidyl-prolyl cis-trans isomerse D compare
Atu2015 -1.8 -12.8 aminotransferase compare
Atu1580 -1.7 -9.8 ABC transporter, nucleotide binding/ATPase protein (amino acid) compare
Atu1589 -1.6 -4.9 aminotransferase, class I compare
Atu1354 -1.6 -1.7 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu1573 -1.5 -2.6 hypothetical protein compare
Atu3763 -1.5 -2.7 hypothetical protein compare
Atu2155 -1.5 -11.8 methionine synthase compare
Atu0566 -1.5 -1.7 hypothetical protein compare
Atu0141 -1.4 -1.8 cytochrome O ubiquinol oxidase subunit I compare
Atu1439 -1.4 -2.5 hypothetical protein compare
Atu2548 -1.4 -10.0 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu3731 -1.3 -7.4 5-formyltetrahydrofolate cyclo-ligase compare
Atu3496 -1.3 -4.0 hypothetical protein compare
Atu8054 -1.3 -0.8 hypothetical protein compare
Atu1457 -1.3 -2.6 hypothetical protein compare
Atu3008 -1.3 -1.3 hypothetical protein compare
Atu0421 -1.2 -1.5 ABC transporter, membrane spanning protein compare
Atu1577 -1.2 -4.3 ABC transporter, substrate binding protein (amino acid) compare
Atu0422 -1.2 -1.5 ABC transporter, membrane spanning protein compare
Atu1685 -1.2 -1.2 hypothetical protein compare
Atu1579 -1.2 -7.0 ABC transporter, membrane spanning protein (amino acid) compare
Atu0361 -1.2 -2.4 transcriptional regulator compare
Atu2402 -1.2 -4.7 urease accessory protein compare
Atu3483 -1.2 -4.3 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu8115 -1.2 -4.3 Hypothetical Protein compare
Atu4096 -1.1 -5.6 nicotinate-nucleotide pyrophosphorylase compare
Atu3730 -1.1 -1.7 hypothetical protein compare
Atu2193 -1.1 -1.0 hypothetical protein compare
Atu4006 -1.1 -4.6 AsnC family transcriptional regulator compare
Atu3482 -1.0 -7.1 pantoate--beta-alanine ligase compare
Atu0837 -1.0 -4.7 transcriptional regulator, MarR family compare
Atu1456 -1.0 -6.8 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu0319 -1.0 -1.4 ubiquinone biosynthesis protein compare
Atu1455 -1.0 -2.1 hypothetical protein compare
Atu0119 -1.0 -1.2 hypothetical protein compare
Atu0723 -1.0 -1.5 FAD dependent oxidoreductase compare
Atu0654 -1.0 -4.9 transcriptional regulator, LysR family compare
Atu1149 -1.0 -1.6 adenylate cyclase compare
Atu1774 -1.0 -5.4 ABC transporter, substrate binding protein (peptide) compare
Atu3300 -1.0 -6.0 aminotransferase compare
Atu1508 -1.0 -4.0 hypothetical protein compare
Atu8034 -0.9 -3.3 hypothetical protein compare
Atu0876 -0.9 -1.5 superoxide dismutase compare
Atu5451 -0.9 -0.7 hypothetical protein compare
Atu2376 -0.9 -0.8 hypothetical protein compare
Atu3120 -0.9 -1.2 hypothetical protein compare
Atu1578 -0.9 -4.6 ABC transporter, membrane spanning protein (amino acid) compare
Atu0690 -0.9 -1.9 hypothetical protein compare
Atu8088 -0.9 -1.9 hypothetical protein compare
Atu2783 -0.9 -3.1 acetyltransferase compare
Atu8203 -0.9 -2.4 hypothetical protein compare
Atu0817 -0.9 -5.5 sulfate adenylate transferase, subunit 2 compare
Atu1444 -0.9 -4.1 nitrogen regulation protein compare
Atu1810 -0.9 -1.2 hypothetical protein compare
Atu4098 -0.8 -6.0 quinolinate synthetase compare
Atu4616 -0.8 -1.3 dTDP-4-dehydrorhamnose reductase compare
Atu4217 -0.8 -1.3 TetR family transcriptional regulator compare
Atu3468 -0.8 -1.0 hypothetical protein compare
Atu1103 -0.8 -2.8 rRNA-adenine N6,N6-dimethyltransferase compare
Atu2569 -0.8 -6.0 thiamine biosynthesis protein compare
Atu2209 -0.8 -2.6 pyrroline-5-carboxylate reductase compare
Atu1359 -0.8 -0.9 dnaK deletion suppressor protein compare
Atu0818 -0.8 -4.7 phosphoadenosine phosphosulfate reductase compare
Atu1454 -0.8 -3.2 siroheme synthase compare
Atu2123 -0.8 -3.6 methylenetetrahydrofolate reductase compare
Atu0816 -0.8 -6.1 sulfate adenylate transferase, subunit 1 compare
Atu4166 -0.8 -1.6 UDP-glucose 4-epimerase compare
Atu3908 -0.8 -4.7 GntR family transcriptional regulator compare
Atu8135 -0.8 -3.6 hypothetical protein compare
Atu2439 -0.8 -1.2 hypothetical protein compare
Atu4097 -0.8 -4.9 L-aspartate oxidase compare
Atu0189 -0.7 -2.3 ABC transporter, membrane spanning protein (peptide) compare
Atu4173 -0.7 -2.1 phosphoenolpyruvate-protein phosphotransferase compare
Atu0026 -0.7 -0.9 hypothetical protein compare
Atu3012 -0.7 -1.6 hypothetical protein compare
Atu3290 -0.7 -5.2 phosphomethylpyrimidine kinase compare
Atu1110 -0.7 -1.3 cytosol aminopeptidase compare
Atu1714 -0.7 -1.3 exonuclease III compare
Atu8177 -0.7 -3.1 hypothetical protein compare
Atu0188 -0.7 -2.3 ABC transporter, membrane spanning protein (peptide) compare
Atu0953 -0.7 -0.8 hypothetical protein compare
Atu2207 -0.7 -1.9 two component sensor kinase compare
Atu0795 -0.7 -1.6 hypothetical protein compare
Atu1464 -0.7 -2.4 glycine cleavage system T protein, aminomethyltransferase compare
Atu2758 -0.7 -4.5 ammonium transporter compare
Atu4618 -0.7 -4.6 dTDP-rhamnose-3,5-epimerase compare
Atu0029 -0.7 -2.8 S-adenosylhomocysteine hydrolase compare
Atu5470 -0.6 -1.2 hypothetical protein compare
Atu1754 -0.6 -1.7 hypothetical protein compare
Atu1369 -0.6 -1.8 HIT family protein compare
Atu5045 -0.6 -0.8 hypothetical protein compare
Atu3912 -0.6 -4.1 hypothetical protein compare
Atu2130 -0.6 -3.2 hypothetical protein compare
Atu1748 -0.6 -4.5 NIFU-like protein compare
Atu2335 -0.6 -1.5 hypothetical protein compare
Atu1028 -0.6 -1.2 hypothetical protein compare
Atu0886 -0.6 -0.8 hypothetical protein compare
Atu0819 -0.6 -2.2 hypothetical protein compare
Atu1009 -0.6 -1.3 hypothetical protein compare
Atu3910 -0.6 -3.1 LamB/YcsF family protein compare
Atu3288 -0.6 -3.5 hydroxyethylthiazole kinase compare
Atu2205 -0.6 -3.5 transcriptional regulator, MarR family compare
Atu1336 -0.6 -1.8 hypothetical protein compare
Atu1372 -0.6 -3.0 hypothetical protein compare
Atu5011 -0.6 -1.7 polyketide biosynthesis dithiol-disulfide isomerase compare
Atu1321 -0.6 -2.0 hypothetical protein compare
Atu2057 -0.6 -1.4 DNA helicase II compare
Atu5115 -0.6 -0.9 hypothetical protein compare
Atu2710 -0.6 -3.6 hypothetical protein compare
Atu0170 -0.6 -2.6 hypothetical protein compare
Atu3095 -0.6 -1.6 hypothetical protein compare
Atu2554 -0.6 -1.2 lysyl-tRNA synthetase compare
Atu0703 -0.6 -1.2 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu0641 -0.5 -1.8 hypothetical protein compare
Atu8052 -0.5 -0.8 hypothetical protein compare
Atu1358 -0.5 -1.6 hypothetical protein compare
Atu5057 -0.5 -0.7 hypothetical protein compare
Atu8159 -0.5 -1.5 hypothetical protein compare
Atu3668 -0.5 -1.8 siderophore biosynthesis protein compare
Atu2204 -0.5 -1.0 hypothetical protein compare
Atu8023 -0.5 -1.1 hypothetical protein compare
Atu3913 -0.5 -3.1 biotin carboxylase compare
Atu4017 -0.5 -4.0 MFS permease compare


Specific Phenotypes

For 13 genes in this experiment

For nitrogen source L-Arginine in Agrobacterium fabrum C58

For nitrogen source L-Arginine across organisms