Experiment set3IT037 for Agrobacterium fabrum C58

Compare to:

D-Glucosamine Hydrochloride nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu5430 -3.2 -2.1 hypothetical protein compare
Atu3706 -2.7 -13.1 D-3-phosphoglycerate dehydrogenase compare
Atu1030 -2.5 -2.7 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1446 -2.4 -3.1 two component response regulator compare
Atu0017 -2.3 -3.3 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1359 -2.3 -1.9 dnaK deletion suppressor protein compare
Atu3707 -2.2 -4.6 phosphoserine aminotransferase compare
Atu2040 -2.1 -4.0 phosphoserine phosphatase compare
Atu0040 -2.1 -1.6 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu4773 -2.0 -3.4 two component response regulator compare
Atu5115 -2.0 -1.9 hypothetical protein compare
Atu0039 -1.9 -2.6 imidazoleglycerol-phosphate synthase cyclase compare
Atu0679 -1.9 -6.7 ATP phosphoribosyltransferase compare
Atu2289 -1.8 -13.1 anthranilate synthase component I and II compare
Atu1687 -1.8 -9.9 anthranilate phosphoribosyltransferase compare
Atu0099 -1.8 -9.8 prephenate dehydratase compare
Atu2207 -1.7 -4.8 two component sensor kinase compare
Atu0035 -1.7 -9.4 phosphoenolpyruvate carboxykinase compare
Atu2650 -1.6 -9.0 glycerol-3-phosphate dehydrogenase compare
Atu0678 -1.6 -5.3 histidyl-tRNA synthetase compare
Atu1688 -1.5 -4.5 indole-3-glycerol-phosphate synthase compare
Atu0537 -1.5 -6.0 histidinol dehydrogenase compare
Atu0043 -1.5 -2.5 imidazoleglycerol-phosphate dehydratase compare
Atu5164 -1.4 -0.8 type IV secretion protein AvhB3 compare
Atu0030 -1.4 -1.8 phosphocarrier protein HPr compare
Atu1750 -1.3 -4.4 phosphoribosyl c-AMP cyclohydrolase compare
Atu3121 -1.2 -1.8 cold shock protein compare
Atu1445 -1.2 -3.5 two component sensor kinase compare
Atu6189 -1.2 -0.9 protein secretion chaperone compare
Atu5142 -1.1 -1.3 hypothetical protein compare
Atu5034 -1.1 -1.8 hypothetical protein compare
Atu3469 -1.1 -2.3 phosphoglyceromutase compare
Atu3908 -1.1 -7.4 GntR family transcriptional regulator compare
Atu4711 -1.1 -4.5 two component sensor kinase compare
Atu5155 -1.0 -2.5 MarR family transcriptional regulator compare
Atu2036 -1.0 -7.0 acetolactate synthase III, large subunit compare
Atu3763 -0.9 -1.5 hypothetical protein compare
Atu3468 -0.9 -1.1 hypothetical protein compare
Atu0346 -0.9 -1.5 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu6114 -0.9 -1.8 hypothetical protein compare
Atu2790 -0.9 -2.1 3-isopropylmalate dehydratase, small subunit compare
Atu4217 -0.9 -1.2 TetR family transcriptional regulator compare
Atu0361 -0.9 -2.6 transcriptional regulator compare
Atu2762 -0.9 -3.3 hypothetical protein compare
Atu2125 -0.9 -1.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu3912 -0.8 -5.1 hypothetical protein compare
Atu2163 -0.8 -1.5 hypothetical protein compare
Atu3353 -0.8 -5.0 mannose-1-phosphate guanylyltransferase compare
Atu2155 -0.8 -6.6 methionine synthase compare
Atu0777 -0.8 -0.9 hypothetical protein compare
Atu5487 -0.8 -2.4 hypothetical protein compare
Atu0912 -0.8 -1.3 Na+/H+ antiporter compare
Atu0031 -0.8 -1.2 PTS system, IIA component compare
Atu2607 -0.8 -5.4 glucosamine--fructose-6-phosphate aminotransferase compare
Atu1439 -0.8 -1.9 hypothetical protein compare
Atu3668 -0.8 -3.0 siderophore biosynthesis protein compare
Atu4166 -0.8 -2.4 UDP-glucose 4-epimerase compare
Atu1774 -0.8 -4.0 ABC transporter, substrate binding protein (peptide) compare
Atu1205 -0.8 -5.0 threonine dehydratase compare
Atu3311 -0.8 -5.9 phosphomannose isomerase compare
Atu5045 -0.8 -0.9 hypothetical protein compare
Atu0041 -0.8 -1.7 glutamine amidotransferase compare
Atu0971 -0.8 -2.9 two component sensor kinase compare
Atu2264 -0.7 -4.9 2-isopropylmalate synthase compare
Atu4018 -0.7 -5.5 two component sensor kinase compare
Atu0300 -0.7 -2.3 methyltransferase compare
Atu0400 -0.7 -2.0 orotate phosphoribosyltransferase compare
Atu5517 -0.7 -1.5 hypothetical protein compare
Atu2439 -0.7 -1.2 hypothetical protein compare
Atu0190 -0.7 -3.9 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu8087 -0.7 -0.9 putative peptidoglycan binding protein compare
Atu2346 -0.7 -5.0 ABC transporter, membrane spanning protein (sugar) compare
Atu4019 -0.7 -4.2 two component response regulator compare
Atu1620 -0.7 -5.3 triosephosphate isomerase compare
Atu3730 -0.7 -0.9 hypothetical protein compare
Atu3910 -0.7 -3.8 LamB/YcsF family protein compare
Atu0332 -0.7 -4.4 RNA polymerase sigma-54 factor compare
Atu3031 -0.7 -1.2 hypothetical protein compare
Atu2348 -0.7 -3.2 sugar binding protein compare
Atu2555 -0.7 -3.4 L-lysine 2,3-aminomutase compare
Atu5166 -0.7 -2.4 type IV secretion protein AvhB5 compare
Atu2718 -0.7 -3.3 homoserine O-succinyltransferase compare
Atu1308 -0.7 -2.3 aspartate carbamoyl transferase catalytic subunit compare
Atu2379 -0.7 -4.5 phosphomannomutase compare
Atu0135 -0.7 -1.4 uracil phosphoribosyltransferase compare
Atu1009 -0.6 -2.2 hypothetical protein compare
Atu1026 -0.6 -1.4 hypothetical protein compare
Atu2709 -0.6 -4.9 3-isopropylmalate dehydratase, large subunit compare
Atu3496 -0.6 -2.4 hypothetical protein compare
Atu4232 -0.6 -2.6 GntR family transcriptional regulator compare
Atu2123 -0.6 -2.9 methylenetetrahydrofolate reductase compare
Atu2368 -0.6 -1.1 hypothetical protein compare
Atu4405 -0.6 -2.2 periplasmic nitrate reductase NapE compare
Atu8118 -0.6 -2.3 putative universal stress protein compare
Atu1028 -0.6 -1.4 hypothetical protein compare
Atu1699 -0.6 -1.4 molybdopterin-guanine dinucleotide biosynthesis protein B compare
Atu2554 -0.6 -1.6 lysyl-tRNA synthetase compare
Atu1462 -0.6 -4.2 glycine cleavage system protein P2 compare
Atu1140 -0.6 -2.5 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2710 -0.6 -3.3 hypothetical protein compare
Atu0544 -0.6 -1.5 hypothetical protein compare
Atu0272 -0.6 -1.4 transcriptional regulator, MarR family compare
Atu0026 -0.6 -0.7 hypothetical protein compare
Atu2803 -0.6 -2.5 Cobalamin biosynthesis associated protein compare
Atu1667 -0.6 -1.3 hypothetical protein compare
Atu0357 -0.6 -3.3 phosphate starvation inducible protein compare
Atu5124 -0.6 -3.1 glutamate-1-semialdehyde aminotransferase compare
Atu4610 -0.6 -4.3 sugar nucleotide epimerase/dehydratase compare
Atu2140 -0.6 -2.0 hypothetical protein compare
Atu0322 -0.6 -2.3 enoyl CoA hydratase compare
Atu2349 -0.6 -1.3 hypothetical protein compare
Atu0486 -0.6 -3.1 dihydroorotate dehydrogenase compare
Atu1810 -0.6 -0.8 hypothetical protein compare
Atu1455 -0.5 -1.4 hypothetical protein compare
Atu2777 -0.5 -2.9 hypothetical protein compare
Atu0432 -0.5 -2.7 O-succinylhomoserine sulfhydrylase compare
Atu2801 -0.5 -2.5 precorrin-2 C20 methyltransferase compare
Atu1163 -0.5 -1.3 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu5513 -0.5 -0.6 cold shock protein compare
Atu0298 -0.5 -2.6 orotidine 5 compare
Atu8012 -0.5 -1.1 hypothetical protein compare
Atu2441 -0.5 -1.0 RNA methylase compare
Atu3727 -0.5 -1.9 hypothetical protein compare
Atu1592 -0.5 -3.0 hypothetical protein compare
Atu0895 -0.5 -1.5 ABC transporter, substrate binding protein compare
Atu3120 -0.5 -1.1 hypothetical protein compare
Atu2347 -0.5 -3.3 ABC transporter, nucleotide binding/ATPase protein (sugar) compare
Atu2205 -0.5 -3.3 transcriptional regulator, MarR family compare
Atu2728 -0.5 -2.5 beta (1-->2) glucan export ATP-binding protein compare
Atu5081 -0.5 -2.4 ABC transporter membrane spanning protein (sugar) compare
Atu1777 -0.5 -1.9 hypothetical protein compare
Atu0977 -0.5 -1.7 serine protease DO-like protease compare
Atu0690 -0.5 -1.7 hypothetical protein compare
Atu5514 -0.5 -2.2 DnaJ family molecular chaperone compare
Atu1005 -0.5 -2.0 hypothetical protein compare
Atu5147 -0.5 -1.6 Mg(2+) transport ATPase compare
Atu5497 -0.5 -2.0 hypothetical protein compare
Atu5494 -0.5 -1.8 hypothetical protein compare
Atu6181 -0.5 -1.5 virA/G regulated topoisomerase compare
Atu2333 -0.5 -3.0 ATP-dependent RNA helicase compare
Atu6076 -0.5 -2.5 ABC transporter, membrane spanning protein (peptide) compare
Atu4677 -0.5 -1.0 hypothetical protein compare
Atu1252 -0.5 -2.0 hypothetical protein compare
Atu6155 -0.5 -1.7 conserved hypothetical protein compare
Atu4077 -0.5 -3.4 glycogen branching protein compare
Atu0036 -0.5 -1.1 hypothetical protein compare
Atu6071 -0.5 -2.2 Zn-dependent hydrolases compare
Atu3799 -0.5 -3.4 GntR family transcriptional regulator compare
Atu3755 -0.5 -2.1 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2761 -0.5 -2.7 exodeoxyribonuclease III compare
Atu3509 -0.5 -1.5 hypothetical protein compare
Atu6108 -0.5 -1.3 alkylphosphonate uptake protein compare
Atu6133 -0.5 -1.3 conserved hypothetical protein compare
Atu3507 -0.5 -1.6 hypothetical protein compare
Atu3256 -0.5 -2.0 zinc-binding dehydrogenase compare
Atu5515 -0.5 -1.9 hypothetical protein compare
Atu4061 -0.4 -1.9 exopolysaccharide production repressor protein compare
Atu1154 -0.4 -1.4 hypothetical protein compare
Atu3075 -0.4 -2.4 TetR family transcriptional regulator compare
Atu3052 -0.4 -2.5 MarR family transcriptional regulator compare
Atu0535 -0.4 -2.2 hypothetical protein compare
Atu0319 -0.4 -0.7 ubiquinone biosynthesis protein compare
Atu4425 -0.4 -2.8 inosine-uridine preferring nucleoside hydrolase compare
Atu3572 -0.4 -2.8 transcriptional regulator compare
Atu2783 -0.4 -2.1 acetyltransferase compare
Atu1801 -0.4 -1.4 hypothetical protein compare
Atu2183 -0.4 -2.8 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0399 -0.4 -2.1 dihydroorotase compare
Atu3315 -0.4 -1.6 UDP-glucose 4-epimerase compare
Atu0890 -0.4 -1.6 hypothetical protein compare
Atu0611 -0.4 -2.2 ABC transporter, membrane spanning protein compare
Atu2267 -0.4 -2.4 hypothetical protein compare
Atu3884 -0.4 -3.4 hypothetical protein compare
Atu5203 -0.4 -2.1 beta-lactamase compare
Atu1336 -0.4 -1.9 hypothetical protein compare
Atu0029 -0.4 -2.4 S-adenosylhomocysteine hydrolase compare
Atu1795 -0.4 -2.3 malonate transporter compare
Atu2791 -0.4 -2.4 3-isopropylmalate dehydrogenase compare
Atu5437 -0.4 -1.3 hypothetical protein compare
Atu1422 -0.4 -2.7 transcriptional regulator, MarR family compare
Atu0647 -0.4 -1.8 phosphoribosylamine--glycine ligase compare
Atu3628 -0.4 -1.4 hypothetical protein compare
Atu0636 -0.4 -2.2 hypothetical protein compare
Atu2807 -0.4 -2.0 cob(I)alamin adenosyltransferase compare
Atu6081 -0.4 -2.3 conserved hypothetical protein compare
Atu1475 -0.4 -1.2 hypothetical protein compare
Atu1722 -0.4 -1.9 hypothetical protein compare
Atu1075 -0.4 -2.3 amidophosphoribosyltransferase compare
Atu4290 -0.4 -1.2 hypothetical protein compare
Atu1660 -0.4 -1.4 hypothetical protein compare
Atu2787 -0.4 -0.5 hypothetical protein compare
Atu5054 -0.4 -1.4 hypothetical protein compare
Atu4148 -0.4 -1.8 UDP-glucuronic acid epimerase compare
Atu6059 -0.4 -2.1 ABC transporter, substrate binding protein (nitrate/sulfonate) compare
Atu1803 -0.4 -2.5 cold shock protein compare
Atu1466 -0.4 -0.9 hypothetical protein compare
Atu3667 -0.4 -1.9 aspartate alpha-decarboxylase compare
Atu1463 -0.4 -2.0 glycine cleavage system component H compare
Atu8162 -0.4 -0.8 hypothetical protein compare
Atu3676 -0.4 -2.6 siderophore biosynthesis protein compare


Specific Phenotypes

For 7 genes in this experiment

For nitrogen source D-Glucosamine Hydrochloride in Agrobacterium fabrum C58

For nitrogen source D-Glucosamine Hydrochloride across organisms