Experiment set3IT036 for Agrobacterium fabrum C58

Compare to:

D-Glucosamine Hydrochloride nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu1359 -4.9 -1.9 dnaK deletion suppressor protein compare
Atu2040 -2.8 -7.1 phosphoserine phosphatase compare
Atu5142 -2.7 -2.5 hypothetical protein compare
Atu0043 -2.7 -2.7 imidazoleglycerol-phosphate dehydratase compare
Atu3706 -2.6 -8.7 D-3-phosphoglycerate dehydrogenase compare
Atu5164 -2.5 -1.0 type IV secretion protein AvhB3 compare
Atu0895 -2.5 -4.6 ABC transporter, substrate binding protein compare
Atu3008 -2.3 -1.6 hypothetical protein compare
Atu1750 -2.3 -4.4 phosphoribosyl c-AMP cyclohydrolase compare
Atu3121 -2.3 -2.3 cold shock protein compare
Atu0017 -2.2 -3.3 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1446 -2.1 -3.6 two component response regulator compare
Atu0225 -2.0 -1.4 hypothetical protein compare
Atu2289 -1.9 -13.6 anthranilate synthase component I and II compare
Atu0099 -1.9 -9.3 prephenate dehydratase compare
Atu4217 -1.9 -3.2 TetR family transcriptional regulator compare
Atu0679 -1.9 -4.9 ATP phosphoribosyltransferase compare
Atu6098 -1.9 -0.7 transcriptional regulator, HTH family compare
Atu1687 -1.8 -8.2 anthranilate phosphoribosyltransferase compare
Atu0031 -1.8 -1.7 PTS system, IIA component compare
Atu1030 -1.8 -2.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0041 -1.8 -2.7 glutamine amidotransferase compare
Atu3707 -1.8 -3.0 phosphoserine aminotransferase compare
Atu1445 -1.7 -7.0 two component sensor kinase compare
Atu0346 -1.6 -2.5 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu3469 -1.6 -3.3 phosphoglyceromutase compare
Atu0537 -1.6 -5.7 histidinol dehydrogenase compare
Atu2650 -1.6 -8.3 glycerol-3-phosphate dehydrogenase compare
Atu0035 -1.5 -7.5 phosphoenolpyruvate carboxykinase compare
Atu0678 -1.4 -4.1 histidyl-tRNA synthetase compare
Atu8203 -1.4 -1.6 hypothetical protein compare
Atu0769 -1.4 -2.2 protoheme IX farnesyltransferase compare
Atu1688 -1.4 -4.1 indole-3-glycerol-phosphate synthase compare
Atu0400 -1.4 -4.2 orotate phosphoribosyltransferase compare
Atu2207 -1.4 -4.4 two component sensor kinase compare
Atu2439 -1.4 -1.7 hypothetical protein compare
Atu5125 -1.3 -2.5 GntR family transcriptional regulator compare
Atu0876 -1.3 -2.1 superoxide dismutase compare
Atu0030 -1.2 -1.5 phosphocarrier protein HPr compare
Atu8056 -1.2 -1.3 hypothetical protein compare
Atu4711 -1.2 -6.5 two component sensor kinase compare
Atu3763 -1.2 -1.9 hypothetical protein compare
Atu2036 -1.1 -7.8 acetolactate synthase III, large subunit compare
Atu4773 -1.1 -2.1 two component response regulator compare
Atu2718 -1.1 -5.3 homoserine O-succinyltransferase compare
Atu8099 -1.1 -1.5 hypothetical protein compare
Atu1573 -1.1 -1.3 hypothetical protein compare
Atu8088 -1.1 -2.4 hypothetical protein compare
Atu5450 -1.1 -2.5 hypothetical protein compare
Atu8087 -1.0 -0.8 putative peptidoglycan binding protein compare
Atu3009 -1.0 -1.3 exopolysaccharide production protein compare
Atu0421 -1.0 -1.3 ABC transporter, membrane spanning protein compare
Atu3908 -1.0 -6.8 GntR family transcriptional regulator compare
Atu3910 -1.0 -4.1 LamB/YcsF family protein compare
Atu0039 -0.9 -1.5 imidazoleglycerol-phosphate synthase cyclase compare
Atu1219 -0.9 -0.7 hypothetical protein compare
Atu1844 -0.9 -1.9 Phosphoribosylformylglycinamidine synthetase compare
Atu2155 -0.9 -7.4 methionine synthase compare
Atu8162 -0.9 -1.4 hypothetical protein compare
Atu1774 -0.9 -4.9 ABC transporter, substrate binding protein (peptide) compare
Atu3353 -0.9 -6.0 mannose-1-phosphate guanylyltransferase compare
Atu6165 -0.9 -0.5 hypothetical protein compare
Atu1439 -0.9 -2.1 hypothetical protein compare
Atu2264 -0.9 -5.2 2-isopropylmalate synthase compare
Atu3912 -0.9 -4.8 hypothetical protein compare
Atu6121 -0.8 -2.5 conserved hypothetical protein compare
Atu4018 -0.8 -4.7 two component sensor kinase compare
Atu2347 -0.8 -5.2 ABC transporter, nucleotide binding/ATPase protein (sugar) compare
Atu1457 -0.8 -1.4 hypothetical protein compare
Atu2348 -0.8 -4.2 sugar binding protein compare
Atu0322 -0.8 -3.1 enoyl CoA hydratase compare
Atu5166 -0.8 -2.3 type IV secretion protein AvhB5 compare
Atu0971 -0.8 -1.9 two component sensor kinase compare
Atu1140 -0.8 -3.6 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0690 -0.8 -1.8 hypothetical protein compare
Atu5540 -0.8 -0.4 hypothetical protein compare
Atu3265 -0.8 -2.4 hypothetical protein compare
Atu2379 -0.8 -4.8 phosphomannomutase compare
Atu3730 -0.8 -0.8 hypothetical protein compare
Atu2787 -0.8 -0.8 hypothetical protein compare
Atu5183 -0.8 -2.7 hypothetical protein compare
Atu2349 -0.8 -1.5 hypothetical protein compare
Atu3075 -0.8 -4.2 TetR family transcriptional regulator compare
Atu2433 -0.8 -1.0 hypothetical protein compare
Atu1620 -0.7 -4.5 triosephosphate isomerase compare
Atu1685 -0.7 -0.8 hypothetical protein compare
Atu2793 -0.7 -2.8 cobyrinic acid a,c-diamide synthase compare
Atu1075 -0.7 -3.7 amidophosphoribosyltransferase compare
Atu1307 -0.7 -3.2 dihydroorotase compare
Atu0432 -0.7 -4.0 O-succinylhomoserine sulfhydrylase compare
Atu0190 -0.7 -3.2 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu6123 -0.7 -1.9 conserved hypothetical protein compare
Atu0941 -0.7 -0.7 hypothetical protein compare
Atu8055 -0.7 -1.8 hypothetical protein compare
Atu2346 -0.7 -4.7 ABC transporter, membrane spanning protein (sugar) compare
Atu3754 -0.7 -3.9 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0846 -0.7 -2.5 transcriptional regulator, MarR family compare
Atu1163 -0.7 -1.3 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0943 -0.7 -1.2 hypothetical protein compare
Atu5517 -0.7 -0.7 hypothetical protein compare
Atu5117 -0.7 -3.2 hypothetical protein compare
Atu5163 -0.7 -1.4 type IV secretion protein AvhB2 compare
Atu1205 -0.7 -4.0 threonine dehydratase compare
Atu3311 -0.7 -4.9 phosphomannose isomerase compare
Atu4232 -0.7 -2.0 GntR family transcriptional regulator compare
Atu1141 -0.7 -2.7 Phosphoribosylglycinamide synthetase compare
Atu2456 -0.7 -3.0 lactoylglutathione lyase compare
Atu1339 -0.6 -1.6 ribonuclease E compare
Atu1078 -0.6 -1.6 hypothetical protein compare
Atu2067 -0.6 -0.6 hypothetical protein compare
Atu0422 -0.6 -0.8 ABC transporter, membrane spanning protein compare
Atu0544 -0.6 -0.9 hypothetical protein compare
Atu0298 -0.6 -2.2 orotidine 5 compare
Atu4166 -0.6 -1.7 UDP-glucose 4-epimerase compare
Atu0696 -0.6 -2.9 phosphatase compare
Atu0189 -0.6 -1.1 ABC transporter, membrane spanning protein (peptide) compare
Atu4061 -0.6 -1.7 exopolysaccharide production repressor protein compare
Atu2649 -0.6 -1.6 hypothetical protein compare
Atu6064 -0.6 -2.1 haloalkane dehalogenase compare
Atu3012 -0.6 -0.9 hypothetical protein compare
Atu5462 -0.6 -1.2 ABC transporter nucleotide binding/ATPase compare
Atu0647 -0.6 -2.4 phosphoribosylamine--glycine ligase compare
Atu3036 -0.6 -1.9 dipeptide ABC transporter permease compare
Atu0580 -0.6 -1.7 flagellar biosynthetic protein compare
Atu6149 -0.6 -1.3 hypothetical protein compare
Atu0486 -0.6 -2.5 dihydroorotate dehydrogenase compare
Atu0889 -0.6 -2.7 hypothetical protein compare
Atu3872 -0.6 -3.0 hypothetical protein compare
Atu0361 -0.6 -1.1 transcriptional regulator compare
Atu4019 -0.6 -3.3 two component response regulator compare
Atu5115 -0.6 -0.6 hypothetical protein compare
Atu6134 -0.6 -2.4 transcriptional regulator compare
Atu2791 -0.6 -3.2 3-isopropylmalate dehydrogenase compare
Atu1850 -0.5 -1.3 phosphoribosylformylglycinamidine synthetase II compare
Atu2376 -0.5 -1.5 hypothetical protein compare
Atu0029 -0.5 -2.0 S-adenosylhomocysteine hydrolase compare
Atu0525 -0.5 -2.0 transcriptional regulator, LuxR family compare
Atu2796 -0.5 -2.7 precorrin-4 C11-methyltransferase compare
Atu1629 -0.5 -0.8 transcriptional regulator, ArsR family compare
Atu4540 -0.5 -1.9 protocatechuate 3,4-dioxygenase subunit beta compare
Atu4502 -0.5 -2.9 cobalamin synthesis protein compare
Atu8159 -0.5 -1.7 hypothetical protein compare
Atu2200 -0.5 -1.7 cold shock protein compare
Atu0141 -0.5 -0.9 cytochrome O ubiquinol oxidase subunit I compare
Atu0577 -0.5 -1.7 FLAF protein compare
Atu1760 -0.5 -0.8 hypothetical protein compare
Atu1462 -0.5 -3.5 glycine cleavage system protein P2 compare
Atu2028 -0.5 -1.0 transcriptional regulator, ArsR family compare
Atu1453 -0.5 -2.2 hypothetical protein compare
Atu2606 -0.5 -1.9 transcriptional regulator, GntR family compare
Atu5045 -0.5 -0.6 hypothetical protein compare
Atu0885 -0.5 -1.0 hypothetical protein compare
Atu5077 -0.5 -2.0 hypothetical protein compare
Atu3264 -0.5 -2.3 IclR family transcriptional regulator compare
Atu2183 -0.5 -3.0 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu1810 -0.5 -0.8 hypothetical protein compare
Atu3677 -0.5 -3.1 polyketide synthase compare
Atu1254 -0.5 -1.1 transcriptional regulator, ArsR family compare
Atu1539 -0.5 -3.2 sulfate permease compare
Atu6071 -0.5 -2.1 Zn-dependent hydrolases compare
Atu3884 -0.5 -3.2 hypothetical protein compare
Atu2801 -0.5 -1.9 precorrin-2 C20 methyltransferase compare
Atu3913 -0.5 -2.5 biotin carboxylase compare
Atu2789 -0.5 -0.8 hypothetical protein compare
Atu4137 -0.5 -1.7 hypothetical protein compare
Atu0611 -0.5 -2.4 ABC transporter, membrane spanning protein compare
Atu0986 -0.5 -0.7 hypothetical protein compare
Atu5549 -0.5 -1.3 hypothetical protein compare
Atu1009 -0.5 -0.9 hypothetical protein compare
Atu2800 -0.5 -2.0 precorrin-3B C17-methyltransferase compare
Atu0997 -0.5 -1.9 hypothetical protein compare
Atu2808 -0.5 -2.1 cobyric acid synthase compare
Atu2821 -0.5 -1.8 transcriptional regulator, GntR family compare
Atu0364 -0.5 -2.2 ribokinase compare
Atu2728 -0.5 -2.0 beta (1-->2) glucan export ATP-binding protein compare
Atu1503 -0.5 -0.6 hypothetical protein compare
Atu6108 -0.5 -1.1 alkylphosphonate uptake protein compare
Atu5545 -0.5 -1.9 hypothetical protein compare
Atu6133 -0.5 -1.5 conserved hypothetical protein compare
Atu0025 -0.5 -1.1 hypothetical protein compare
Atu3755 -0.5 -2.0 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1782 -0.5 -2.0 hypothetical protein compare
Atu0939 -0.5 -1.5 PemI protein compare
Atu0357 -0.5 -2.1 phosphate starvation inducible protein compare
Atu2333 -0.5 -2.2 ATP-dependent RNA helicase compare
Atu4819 -0.5 -2.1 hypothetical protein compare
Atu2204 -0.5 -1.3 hypothetical protein compare
Atu3488 -0.5 -2.4 ABC transporter permease compare
Atu2709 -0.5 -3.4 3-isopropylmalate dehydratase, large subunit compare
Atu4406 -0.4 -1.8 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu2733 -0.4 -2.0 hypothetical protein compare
Atu4618 -0.4 -3.1 dTDP-rhamnose-3,5-epimerase compare
Atu1464 -0.4 -2.8 glycine cleavage system T protein, aminomethyltransferase compare
Atu5078 -0.4 -2.3 LacI family transcription regulator compare
Atu6062 -0.4 -1.9 2-deoxy-D-gluconate 3-dehydrogenase compare
Atu3291 -0.4 -1.9 Lpr family transcriptional regulator compare
Atu3427 -0.4 -1.9 hypothetical protein compare
Atu3468 -0.4 -0.5 hypothetical protein compare
Atu1642 -0.4 -1.1 hypothetical protein compare
Atu2797 -0.4 -1.9 cobalamin biosynthesis protein compare


Specific Phenotypes

For 7 genes in this experiment

For nitrogen source D-Glucosamine Hydrochloride in Agrobacterium fabrum C58

For nitrogen source D-Glucosamine Hydrochloride across organisms