Experiment set3IT035 for Agrobacterium fabrum C58

Compare to:

N-Acetyl-D-Glucosamine nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu2040 -6.5 -4.5 phosphoserine phosphatase compare
Atu3707 -6.3 -4.4 phosphoserine aminotransferase compare
Atu0035 -5.8 -11.1 phosphoenolpyruvate carboxykinase compare
Atu0537 -5.8 -5.6 histidinol dehydrogenase compare
Atu0017 -5.7 -3.9 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0030 -5.6 -2.4 phosphocarrier protein HPr compare
Atu0099 -5.6 -9.3 prephenate dehydratase compare
Atu1687 -5.5 -12.7 anthranilate phosphoribosyltransferase compare
Atu2609 -5.4 -10.9 transcriptional regulator, ROK family compare
Atu0298 -5.3 -8.2 orotidine 5 compare
Atu3706 -5.3 -10.2 D-3-phosphoglycerate dehydrogenase compare
Atu2790 -5.3 -3.1 3-isopropylmalate dehydratase, small subunit compare
Atu0486 -5.3 -7.3 dihydroorotate dehydrogenase compare
Atu0038 -5.2 -6.1 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2264 -5.1 -17.0 2-isopropylmalate synthase compare
Atu1030 -5.1 -3.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0041 -5.1 -3.5 glutamine amidotransferase compare
Atu3469 -5.0 -3.4 phosphoglyceromutase compare
Atu2791 -4.9 -9.3 3-isopropylmalate dehydrogenase compare
Atu1359 -4.9 -2.0 dnaK deletion suppressor protein compare
Atu1688 -4.9 -8.1 indole-3-glycerol-phosphate synthase compare
Atu1750 -4.8 -6.4 phosphoribosyl c-AMP cyclohydrolase compare
Atu0678 -4.8 -8.0 histidyl-tRNA synthetase compare
Atu1308 -4.8 -8.5 aspartate carbamoyl transferase catalytic subunit compare
Atu2289 -4.7 -20.8 anthranilate synthase component I and II compare
Atu1307 -4.7 -7.8 dihydroorotase compare
Atu2036 -4.7 -18.8 acetolactate synthase III, large subunit compare
Atu1844 -4.6 -4.6 Phosphoribosylformylglycinamidine synthetase compare
Atu0400 -4.6 -7.6 orotate phosphoribosyltransferase compare
Atu0432 -4.5 -9.3 O-succinylhomoserine sulfhydrylase compare
Atu1845 -4.5 -5.9 phosphoribosylformylglycinamidine synthase I compare
Atu0039 -4.4 -3.0 imidazoleglycerol-phosphate synthase cyclase compare
Atu1446 -4.4 -4.1 two component response regulator compare
Atu2601 -4.4 -15.7 ABC transporter, substrate binding protein (maltose) compare
Atu2718 -4.4 -9.8 homoserine O-succinyltransferase compare
Atu0043 -4.4 -4.1 imidazoleglycerol-phosphate dehydratase compare
Atu2650 -4.3 -16.7 glycerol-3-phosphate dehydrogenase compare
Atu2605 -4.3 -4.4 hypothetical protein compare
Atu2604 -4.2 -18.2 oxidoreductase compare
Atu2709 -4.2 -19.2 3-isopropylmalate dehydratase, large subunit compare
Atu2600 -4.1 -10.5 ABC transporter, nucleotide binding/ATPase protein (maltose/maltodextrin) compare
Atu3754 -4.1 -8.4 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1205 -4.0 -15.1 threonine dehydratase compare
Atu3885 -4.0 -11.4 inositol monophosphatase compare
Atu0399 -4.0 -8.9 dihydroorotase compare
Atu2603 -3.9 -9.2 ABC transporter, membrane spanning protein (maltose) compare
Atu0679 -3.9 -8.3 ATP phosphoribosyltransferase compare
Atu1141 -3.8 -7.0 Phosphoribosylglycinamide synthetase compare
Atu2602 -3.8 -15.3 ABC transporter, membrane spanning protein (maltose) compare
Atu1850 -3.7 -4.0 phosphoribosylformylglycinamidine synthetase II compare
Atu0647 -3.6 -9.0 phosphoribosylamine--glycine ligase compare
Atu4173 -3.6 -4.2 phosphoenolpyruvate-protein phosphotransferase compare
Atu2608 -3.6 -7.4 N-acetylglucosamine-6-phosphate deacetylase conserved
Atu2607 -3.5 -11.9 glucosamine--fructose-6-phosphate aminotransferase conserved
Atu5430 -3.5 -2.4 hypothetical protein compare
Atu1140 -3.5 -7.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1588 -3.5 -10.0 homoserine dehydrogenase compare
Atu1075 -3.5 -8.5 amidophosphoribosyltransferase compare
Atu2015 -3.4 -15.1 aminotransferase compare
Atu1445 -3.3 -5.9 two component sensor kinase compare
Atu0346 -3.2 -6.6 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1456 -3.2 -13.6 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu3755 -3.0 -7.5 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0040 -2.8 -1.6 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1589 -2.8 -10.3 aminotransferase, class I compare
Atu2606 -2.8 -9.9 transcriptional regulator, GntR family compare
Atu1686 -2.8 -17.6 peptidyl-prolyl cis-trans isomerse D compare
Atu3783 -2.7 -14.2 glutamate synthase subunit beta compare
Atu3482 -2.6 -12.2 pantoate--beta-alanine ligase compare
Atu1620 -2.5 -12.6 triosephosphate isomerase compare
Atu0332 -2.4 -9.1 RNA polymerase sigma-54 factor compare
Atu1454 -2.4 -8.1 siroheme synthase compare
Atu1444 -2.3 -6.3 nitrogen regulation protein compare
Atu2155 -2.2 -15.0 methionine synthase compare
Atu4616 -2.1 -2.8 dTDP-4-dehydrorhamnose reductase compare
Atu3784 -2.1 -16.4 glutamate synthase large subunit compare
Atu3483 -2.0 -8.1 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu2548 -2.0 -13.2 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0790 -1.9 -7.0 hypothetical protein compare
Atu0029 -1.9 -5.4 S-adenosylhomocysteine hydrolase compare
Atu0641 -1.9 -4.6 hypothetical protein compare
Atu1364 -1.9 -7.7 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0031 -1.9 -2.0 PTS system, IIA component compare
Atu3005 -1.8 -1.7 hypothetical protein compare
Atu2747 -1.8 -10.9 hypothetical protein compare
Atu3739 -1.8 -3.2 phosphoglycerate kinase compare
Atu1457 -1.7 -2.8 hypothetical protein compare
Atu0769 -1.6 -2.8 protoheme IX farnesyltransferase compare
Atu1455 -1.6 -5.7 hypothetical protein compare
Atu4096 -1.6 -8.6 nicotinate-nucleotide pyrophosphorylase compare
Atu4075 -1.6 -8.7 glycogen synthase compare
Atu4618 -1.5 -7.3 dTDP-rhamnose-3,5-epimerase compare
Atu0876 -1.5 -2.9 superoxide dismutase compare
Atu3496 -1.5 -4.9 hypothetical protein compare
Atu1685 -1.5 -1.4 hypothetical protein compare
Atu4711 -1.4 -5.0 two component sensor kinase compare
Atu4098 -1.3 -7.7 quinolinate synthetase compare
Atu1462 -1.3 -7.6 glycine cleavage system protein P2 compare
Atu0422 -1.3 -1.6 ABC transporter, membrane spanning protein compare
Atu6114 -1.2 -1.3 hypothetical protein compare
Atu4166 -1.2 -3.1 UDP-glucose 4-epimerase compare
Atu4097 -1.2 -6.3 L-aspartate oxidase compare
Atu2678 -1.2 -4.8 2'-5' RNA ligase compare
Atu0434 -1.2 -2.3 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu3663 -1.1 -2.0 hypothetical protein compare
Atu2554 -1.1 -1.9 lysyl-tRNA synthetase compare
Atu3731 -1.1 -5.5 5-formyltetrahydrofolate cyclo-ligase compare
Atu2376 -1.1 -1.1 hypothetical protein compare
Atu2433 -1.1 -1.6 hypothetical protein compare
Atu2209 -1.1 -3.2 pyrroline-5-carboxylate reductase compare
Atu8115 -1.1 -4.2 Hypothetical Protein compare
Atu1464 -1.1 -5.4 glycine cleavage system T protein, aminomethyltransferase compare
Atu3908 -1.1 -7.0 GntR family transcriptional regulator compare
Atu5045 -1.1 -1.7 hypothetical protein compare
Atu1028 -1.0 -2.0 hypothetical protein compare
Atu5164 -1.0 -0.7 type IV secretion protein AvhB3 compare
Atu1774 -1.0 -5.0 ABC transporter, substrate binding protein (peptide) compare
Atu2123 -1.0 -4.5 methylenetetrahydrofolate reductase compare
Atu1463 -1.0 -3.8 glycine cleavage system component H compare
Atu3730 -1.0 -1.5 hypothetical protein compare
Atu2207 -1.0 -1.6 two component sensor kinase compare
Atu1303 -1.0 -5.7 exoribonuclease compare
Atu3008 -1.0 -1.0 hypothetical protein compare
Atu0361 -0.9 -2.3 transcriptional regulator compare
Atu3912 -0.9 -5.8 hypothetical protein compare
Atu2439 -0.9 -1.6 hypothetical protein compare
Atu0190 -0.9 -5.6 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu4505 -0.9 -5.4 LacI family transcriptional regulator compare
Atu2113 -0.9 -2.4 N-acetylmuramoyl-L-alanine amidase compare
Atu5142 -0.9 -1.0 hypothetical protein compare
Atu0972 -0.9 -3.9 lipA protein compare
Atu1163 -0.9 -1.7 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0115 -0.9 -0.9 hypothetical protein compare
Atu0025 -0.8 -1.6 hypothetical protein compare
Atu0777 -0.8 -0.9 hypothetical protein compare
Atu2200 -0.8 -2.2 cold shock protein compare
Atu3485 -0.8 -4.8 short chain dehydrogenase compare
Atu1565 -0.8 -2.5 serine acetyltransferase compare
Atu0598 -0.8 -4.3 phosphogluconate dehydratase compare
Atu4232 -0.8 -3.2 GntR family transcriptional regulator compare
Atu0524 -0.8 -3.4 transcriptional regulator, LuxR family compare
Atu4176 -0.8 -2.6 hypothetical protein compare
Atu3740 -0.7 -4.3 fructose bisphosphate aldolase compare
Atu4890 -0.7 -1.4 IS426 transposase compare
Atu1803 -0.7 -3.5 cold shock protein compare
Atu1859 -0.7 -2.5 glutaminase A compare
Atu4614 -0.7 -4.1 glycosyltransferase compare
Atu0130 -0.7 -1.6 cytidine deaminase compare
Atu2710 -0.7 -4.3 hypothetical protein compare
Atu3032 -0.7 -2.3 hypothetical protein compare
Atu5043 -0.7 -2.2 hypothetical protein compare
Atu3012 -0.7 -0.9 hypothetical protein compare
Atu5107 -0.7 -1.3 hypothetical protein compare
Atu1573 -0.7 -1.1 hypothetical protein compare
Atu0817 -0.6 -4.8 sulfate adenylate transferase, subunit 2 compare
Atu2267 -0.6 -3.1 hypothetical protein compare
Atu3727 -0.6 -2.0 hypothetical protein compare
Atu0895 -0.6 -1.7 ABC transporter, substrate binding protein compare
Atu3297 -0.6 -4.5 two component sensor kinase for C4-dicarboxylate transport compare
Atu0135 -0.6 -0.9 uracil phosphoribosyltransferase compare
Atu2183 -0.6 -3.7 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4613 -0.6 -4.8 glycosyltransferase compare
Atu4527 -0.6 -1.2 hypothetical protein compare
Atu3353 -0.6 -4.2 mannose-1-phosphate guanylyltransferase compare
Atu5468 -0.6 -1.1 hypothetical protein compare
Atu4873 -0.6 -2.8 TetR family transcriptional regulator compare
Atu2442 -0.6 -1.1 hypothetical protein compare
Atu1103 -0.6 -1.9 rRNA-adenine N6,N6-dimethyltransferase compare
Atu2163 -0.6 -1.1 hypothetical protein compare
Atu4819 -0.6 -1.6 hypothetical protein compare
Atu5125 -0.6 -1.8 GntR family transcriptional regulator compare
Atu5173 -0.6 -1.0 dehydrogenase compare
Atu3799 -0.6 -3.7 GntR family transcriptional regulator compare
Atu0816 -0.6 -4.5 sulfate adenylate transferase, subunit 1 compare
Atu0566 -0.6 -1.3 hypothetical protein compare
Atu0938 -0.6 -1.7 transcriptional regulator, MerR family compare
Atu1904 -0.6 -1.8 transcriptional regulator compare
Atu0026 -0.6 -0.7 hypothetical protein compare
Atu4609 -0.5 -4.2 glycosyltransferase compare
Atu4615 -0.5 -3.8 glucose-1-phosphate thymidylyltransferase compare
Atu0986 -0.5 -0.9 hypothetical protein compare
Atu5028 -0.5 -1.5 IS426 transposase compare
Atu3296 -0.5 -2.9 two component response regulator for C4-dicarboxylate transport compare
Atu0291 -0.5 -3.3 hypothetical protein compare
Atu3311 -0.5 -4.2 phosphomannose isomerase compare
Atu2772 -0.5 -1.7 Invasion protein A compare
Atu0184 -0.5 -1.6 glucokinase compare
Atu4753 -0.5 -1.6 amino acid ABC transporter permease compare
Atu4427 -0.5 -2.4 replicative DNA helicase compare
Atu1333 -0.5 -1.6 outer membrane protein compare
Atu3423 -0.5 -1.6 hypothetical protein compare
Atu1346 -0.5 -2.2 phenazine antibiotic biosynthesis related protein compare
Atu4469 -0.5 -1.9 iron ABC transporter permease compare
Atu8166 -0.5 -2.5 hypothetical protein compare
Atu1175 -0.5 -0.9 hypothetical protein compare
Atu0818 -0.5 -2.3 phosphoadenosine phosphosulfate reductase compare
Atu4076 -0.5 -3.1 glucose-1-phosphate adenylyltransferase compare
Atu4077 -0.5 -3.3 glycogen branching protein compare
Atu0636 -0.5 -2.3 hypothetical protein compare
Atu3036 -0.5 -2.2 dipeptide ABC transporter permease compare


Specific Phenotypes

For 12 genes in this experiment

For nitrogen source N-Acetyl-D-Glucosamine in Agrobacterium fabrum C58

For nitrogen source N-Acetyl-D-Glucosamine across organisms