Experiment set3IT033 for Agrobacterium fabrum C58

Compare to:

Hydantoin nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu1030 -5.4 -3.6 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0041 -5.2 -3.6 glutamine amidotransferase compare
Atu0039 -4.5 -3.1 imidazoleglycerol-phosphate synthase cyclase compare
Atu0679 -4.5 -7.3 ATP phosphoribosyltransferase compare
Atu1688 -4.4 -10.1 indole-3-glycerol-phosphate synthase compare
Atu0017 -4.3 -4.8 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0678 -4.2 -9.0 histidyl-tRNA synthetase compare
Atu0537 -3.8 -9.5 histidinol dehydrogenase compare
Atu1750 -3.7 -6.8 phosphoribosyl c-AMP cyclohydrolase compare
Atu0099 -3.7 -15.8 prephenate dehydratase compare
Atu0035 -3.7 -11.0 phosphoenolpyruvate carboxykinase compare
Atu1687 -3.6 -9.4 anthranilate phosphoribosyltransferase compare
Atu2289 -3.6 -16.5 anthranilate synthase component I and II compare
Atu1359 -3.6 -2.0 dnaK deletion suppressor protein compare
Atu2709 -3.4 -17.1 3-isopropylmalate dehydratase, large subunit compare
Atu2791 -3.3 -9.8 3-isopropylmalate dehydrogenase compare
Atu4217 -3.3 -3.5 TetR family transcriptional regulator compare
Atu2790 -3.2 -4.0 3-isopropylmalate dehydratase, small subunit compare
Atu2264 -3.2 -14.5 2-isopropylmalate synthase compare
Atu0043 -3.1 -4.6 imidazoleglycerol-phosphate dehydratase compare
Atu2036 -3.0 -14.3 acetolactate synthase III, large subunit compare
Atu3740 -2.9 -12.0 fructose bisphosphate aldolase compare
Atu3739 -2.8 -4.0 phosphoglycerate kinase compare
Atu0038 -2.7 -4.2 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu3469 -2.5 -4.2 phosphoglyceromutase compare
Atu3885 -2.4 -9.5 inositol monophosphatase compare
Atu3784 -2.4 -18.2 glutamate synthase large subunit compare
Atu3783 -2.4 -13.8 glutamate synthase subunit beta compare
Atu1205 -2.3 -13.6 threonine dehydratase compare
Atu0079 -2.3 -8.8 Atu0079-1 mutant of pfkB family carbohydrate kinase compare
Atu3908 -2.1 -14.0 GntR family transcriptional regulator compare
Atu0941 -2.1 -1.7 hypothetical protein compare
Atu1140 -2.1 -4.2 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0040 -2.0 -1.6 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1462 -2.0 -11.4 glycine cleavage system protein P2 compare
Atu2650 -1.9 -10.6 glycerol-3-phosphate dehydrogenase compare
Atu4166 -1.9 -3.9 UDP-glucose 4-epimerase compare
Atu0332 -1.9 -9.6 RNA polymerase sigma-54 factor compare
Atu0647 -1.7 -5.9 phosphoribosylamine--glycine ligase compare
Atu1463 -1.7 -8.7 glycine cleavage system component H compare
Atu1620 -1.7 -10.6 triosephosphate isomerase compare
Atu1844 -1.6 -3.0 Phosphoribosylformylglycinamidine synthetase compare
Atu4614 -1.6 -7.9 glycosyltransferase compare
Atu4711 -1.6 -6.5 two component sensor kinase compare
Atu4615 -1.5 -9.3 glucose-1-phosphate thymidylyltransferase compare
Atu1850 -1.5 -2.6 phosphoribosylformylglycinamidine synthetase II compare
Atu4616 -1.5 -2.2 dTDP-4-dehydrorhamnose reductase compare
Atu1464 -1.5 -4.9 glycine cleavage system T protein, aminomethyltransferase compare
Atu5451 -1.5 -0.9 hypothetical protein compare
Atu6098 -1.5 -0.6 transcriptional regulator, HTH family compare
Atu4773 -1.5 -1.8 two component response regulator compare
Atu0029 -1.5 -4.8 S-adenosylhomocysteine hydrolase compare
Atu4617 -1.4 -9.0 dTDP-D-glucose-4,6-dehydratase compare
Atu4613 -1.4 -10.0 glycosyltransferase compare
Atu1028 -1.4 -3.5 hypothetical protein compare
Atu1588 -1.4 -6.3 homoserine dehydrogenase compare
Atu1141 -1.4 -4.4 Phosphoribosylglycinamide synthetase compare
Atu2439 -1.4 -1.7 hypothetical protein compare
Atu1075 -1.4 -5.6 amidophosphoribosyltransferase compare
Atu0346 -1.4 -1.7 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2376 -1.4 -1.5 hypothetical protein compare
Atu2183 -1.3 -7.3 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu5430 -1.3 -0.9 hypothetical protein compare
Atu4618 -1.2 -8.3 dTDP-rhamnose-3,5-epimerase compare
Atu3754 -1.2 -6.5 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu8052 -1.2 -0.8 hypothetical protein compare
Atu4505 -1.2 -4.9 LacI family transcriptional regulator compare
Atu0030 -1.1 -1.6 phosphocarrier protein HPr compare
Atu1445 -1.1 -5.6 two component sensor kinase compare
Atu2758 -1.1 -7.4 ammonium transporter compare
Atu4896 -1.0 -1.7 acetyltransferase compare
Atu2757 -1.0 -5.1 nitrogen regulatory protein PII compare
Atu5088 -1.0 -1.5 hypothetical protein compare
Atu1182 -1.0 -1.0 hypothetical protein compare
Atu0769 -1.0 -2.0 protoheme IX farnesyltransferase compare
Atu1770 -1.0 -5.5 glutamine synthetase compare
Atu3663 -1.0 -1.5 hypothetical protein compare
Atu3353 -1.0 -5.4 mannose-1-phosphate guanylyltransferase compare
Atu0723 -0.9 -1.8 FAD dependent oxidoreductase compare
Atu1845 -0.9 -3.8 phosphoribosylformylglycinamidine synthase I compare
Atu0357 -0.9 -5.5 phosphate starvation inducible protein compare
Atu0189 -0.9 -2.9 ABC transporter, membrane spanning protein (peptide) compare
Atu0026 -0.9 -1.0 hypothetical protein compare
Atu2777 -0.9 -3.9 hypothetical protein compare
Atu1774 -0.9 -4.6 ABC transporter, substrate binding protein (peptide) compare
Atu4873 -0.9 -3.2 TetR family transcriptional regulator compare
Atu2163 -0.8 -1.5 hypothetical protein compare
Atu4884 -0.8 -2.6 hypothetical protein compare
Atu0361 -0.8 -1.8 transcriptional regulator compare
Atu3298 -0.8 -5.4 C4-dicarboxylate transporter DctA compare
Atu3750 -0.8 -2.5 thiamine-phosphate pyrophosphorylase compare
Atu1446 -0.8 -1.7 two component response regulator compare
Atu5045 -0.8 -0.9 hypothetical protein compare
Atu1457 -0.8 -1.8 hypothetical protein compare
Atu8012 -0.8 -1.6 hypothetical protein compare
Atu0422 -0.8 -0.9 ABC transporter, membrane spanning protein compare
Atu5515 -0.8 -1.7 hypothetical protein compare
Atu2123 -0.8 -4.1 methylenetetrahydrofolate reductase compare
Atu0331 -0.8 -2.3 sigma-54 modulation protein compare
Atu1456 -0.8 -4.7 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu3619 -0.8 -2.3 hypothetical protein compare
Atu5142 -0.7 -0.9 hypothetical protein compare
Atu0400 -0.7 -2.9 orotate phosphoribosyltransferase compare
Atu0846 -0.7 -2.1 transcriptional regulator, MarR family compare
Atu2484 -0.7 -1.2 hypothetical protein compare
Atu0190 -0.7 -4.2 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1810 -0.7 -1.1 hypothetical protein compare
Atu1686 -0.7 -5.6 peptidyl-prolyl cis-trans isomerse D compare
Atu5455 -0.7 -1.7 hypothetical protein compare
Atu1369 -0.7 -2.2 HIT family protein compare
Atu6114 -0.7 -0.9 hypothetical protein compare
Atu1087 -0.7 -4.4 secretion protein compare
Atu2800 -0.7 -2.1 precorrin-3B C17-methyltransferase compare
Atu1086 -0.7 -4.6 MFS permease compare
Atu0979 -0.7 -3.2 two component sensor kinase compare
Atu3121 -0.7 -1.0 cold shock protein compare
Atu3012 -0.7 -1.2 hypothetical protein compare
Atu1439 -0.7 -1.1 hypothetical protein compare
Atu1455 -0.7 -2.1 hypothetical protein compare
Atu2385 -0.7 -4.0 N-carbamoyl-beta-alanine amidohydrolase compare
Atu2433 -0.7 -1.0 hypothetical protein compare
Atu0971 -0.6 -2.4 two component sensor kinase compare
Atu3311 -0.6 -4.6 phosphomannose isomerase compare
Atu5155 -0.6 -1.1 MarR family transcriptional regulator compare
Atu3496 -0.6 -2.6 hypothetical protein compare
Atu2555 -0.6 -2.3 L-lysine 2,3-aminomutase compare
Atu5019 -0.6 -1.9 hypothetical protein compare
Atu5146 -0.6 -0.7 hypothetical protein compare
Atu4346 -0.6 -2.5 hypothetical protein compare
Atu3755 -0.6 -2.4 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu5475 -0.6 -0.9 hypothetical protein compare
Atu1705 -0.6 -2.7 SEC-independent protein translocase protein compare
Atu5449 -0.6 -1.5 heat-shock protein compare
Atu1573 -0.6 -1.0 hypothetical protein compare
Atu3763 -0.6 -1.2 hypothetical protein compare
Atu4290 -0.6 -1.4 hypothetical protein compare
Atu3759 -0.6 -1.1 hypothetical protein compare
Atu2207 -0.6 -1.4 two component sensor kinase compare
Atu4391 -0.6 -1.1 nitric oxide reductase NorE protein compare
Atu8029 -0.6 -1.3 hypothetical protein compare
Atu8191 -0.6 -1.4 hypothetical protein compare
Atu3297 -0.6 -4.3 two component sensor kinase for C4-dicarboxylate transport compare
Atu3912 -0.6 -3.5 hypothetical protein compare
Atu0115 -0.6 -0.7 hypothetical protein compare
Atu1760 -0.6 -0.9 hypothetical protein compare
Atu5104 -0.6 -1.7 hypothetical protein compare
Atu5440 -0.5 -1.8 hypothetical protein compare
Atu2809 -0.5 -3.1 cobalamin biosynthesis protein compare
Atu0815 -0.5 -1.6 hypothetical protein compare
Atu6189 -0.5 -0.4 protein secretion chaperone compare
Atu1163 -0.5 -1.4 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3296 -0.5 -3.8 two component response regulator for C4-dicarboxylate transport compare
Atu5152 -0.5 -1.1 hypothetical protein compare
Atu0119 -0.5 -0.8 hypothetical protein compare
Atu4888 -0.5 -2.4 hypothetical protein compare
Atu2549 -0.5 -1.8 transcriptional regulator, TetR family compare
Atu6071 -0.5 -2.1 Zn-dependent hydrolases compare
Atu1149 -0.5 -1.0 adenylate cyclase compare
Atu3015 -0.5 -2.6 hypothetical protein compare
Atu3019 -0.5 -3.4 hypothetical protein compare
Atu3034 -0.5 -2.5 ROK family transcriptional regulator compare
Atu1628 -0.5 -1.7 hypothetical protein compare
Atu0977 -0.5 -1.7 serine protease DO-like protease compare
Atu4610 -0.5 -3.6 sugar nucleotide epimerase/dehydratase compare
Atu5471 -0.5 -0.9 hypothetical protein compare
Atu4226 -0.5 -3.7 transcriptional regulator compare
Atu4887 -0.5 -1.7 hypothetical protein compare
Atu3017 -0.5 -0.6 phosphoglyceromutase compare
Atu4869 -0.5 -1.9 hypothetical protein compare
Atu2640 -0.5 -2.3 hypothetical protein compare
Atu1895 -0.5 -2.0 3, 4-dihydroxy-2-butanone 4-phosphate synthase compare
Atu6165 -0.5 -0.3 hypothetical protein compare
Atu3018 -0.5 -1.3 hypothetical protein compare
Atu1581 -0.5 -0.9 hypothetical protein compare
Atu2710 -0.5 -2.7 hypothetical protein compare
Atu2772 -0.5 -1.8 Invasion protein A compare
Atu6064 -0.5 -1.7 haloalkane dehalogenase compare
Atu6134 -0.5 -1.9 transcriptional regulator compare
Atu0074 -0.5 -2.2 molybdopterin biosynthesis protein compare
Atu4280 -0.5 -2.2 short-chain dehydrogenase compare
Atu0382 -0.5 -2.0 hypothetical protein compare
Atu6163 -0.5 -1.4 hypothetical protein compare
Atu0463 -0.5 -2.6 hypothetical protein compare
Atu3030 -0.5 -2.1 hypothetical protein compare
Atu2077 -0.5 -1.4 DNA polymerase III, epsilon subunit compare
Atu2155 -0.5 -3.9 methionine synthase compare
Atu0986 -0.5 -0.8 hypothetical protein compare
Atu8063 -0.5 -0.7 hypothetical protein compare
Atu1752 -0.5 -2.1 hypothetical protein compare
Atu3773 -0.5 -1.3 hypothetical protein compare
Atu3036 -0.5 -2.4 dipeptide ABC transporter permease compare
Atu0432 -0.5 -3.1 O-succinylhomoserine sulfhydrylase compare
Atu1546 -0.5 -1.3 transcriptional regulator, MerR family compare
Atu0953 -0.5 -0.7 hypothetical protein compare
Atu6109 -0.5 -1.5 conserved hypothetical protein compare
Atu5031 -0.5 -2.0 hypothetical protein compare
Atu0298 -0.5 -2.3 orotidine 5 compare
Atu4018 -0.5 -2.8 two component sensor kinase compare
Atu1607 -0.5 -1.0 DNA repair protein compare
Atu4867 -0.5 -2.8 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For nitrogen source Hydantoin in Agrobacterium fabrum C58

For nitrogen source Hydantoin across organisms