Experiment set3IT033 for Agrobacterium fabrum C58

Compare to:

Hydantoin nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
Atu0272 +3.0 18.9 transcriptional regulator, MarR family compare
Atu6131 +2.6 14.6 TraR Antiactivator compare
Atu2386 +2.1 17.4 dihydropyrimidinase compare
Atu6138 +2.0 4.8 Repressor of the acc and arc operons compare
Atu2200 +1.5 7.0 cold shock protein compare
Atu8135 +1.2 8.2 hypothetical protein compare
Atu1225 +1.2 1.9 hypothetical protein compare
Atu6045 +1.2 1.6 replication protein C compare
Atu2193 +1.0 1.5 hypothetical protein compare
Atu0354 +1.0 3.5 ferric uptake regulator compare
Atu0677 +1.0 1.8 hypothetical protein compare
Atu5540 +1.0 0.8 hypothetical protein compare
Atu8018 +0.9 1.3 hypothetical protein compare
Atu0419 +0.9 2.1 two component sensor kinase compare
Atu2634 +0.9 2.5 hypothetical protein compare
Atu2746 +0.9 3.2 hypothetical protein compare
Atu1683 +0.8 1.5 hypothetical protein compare
Atu0654 +0.8 5.3 transcriptional regulator, LysR family compare
Atu8161 +0.8 1.1 hypothetical protein compare
Atu5160 +0.8 2.2 transcriptional regulator protein compare
Atu5114 +0.8 2.2 hypothetical protein compare
Atu2125 +0.7 2.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu2368 +0.7 1.3 hypothetical protein compare
Atu0687 +0.7 1.5 hypothetical protein compare
Atu0943 +0.7 2.2 hypothetical protein compare
Atu8170 +0.7 1.5 hypothetical protein compare
Atu5467 +0.7 1.4 hypothetical protein compare
Atu5115 +0.7 0.7 hypothetical protein compare
Atu6108 +0.7 2.1 alkylphosphonate uptake protein compare
Atu2657 +0.6 1.7 hypothetical protein compare
Atu2286 +0.6 1.4 hypothetical protein compare
Atu2325 +0.6 2.2 hypothetical protein compare
Atu1535 +0.6 1.1 cytochrome c oxidase, FixQ chain compare
Atu1098 +0.6 1.3 hypothetical protein compare
Atu8035 +0.6 1.5 hypothetical protein compare
Atu8046 +0.6 1.6 hypothetical protein compare
Atu4223 +0.6 1.5 sarcosine oxidase delta subunit compare
Atu5517 +0.6 1.5 hypothetical protein compare
Atu0562 +0.6 1.9 flagellar motor switch protein FliN compare
Atu5004 +0.6 2.6 deoxyfructose oxidoreductase compare
Atu8099 +0.6 1.4 hypothetical protein compare
Atu1889 +0.6 1.9 diacylglycerol kinase compare
Atu6171 +0.6 2.1 component of type IV secretion system compare
Atu1031 +0.5 1.7 hypothetical protein compare
Atu2479 +0.5 1.4 tRNA-Gly compare
Atu1062 +0.5 1.4 phosphatidylserine synthase compare
Atu0141 +0.5 1.3 cytochrome O ubiquinol oxidase subunit I compare
Atu0085 +0.5 2.5 tRNA pseudouridine 55 synthase compare
Atu1286 +0.5 2.1 hypothetical protein compare
Atu5470 +0.5 1.0 hypothetical protein compare
Atu2675 +0.5 2.0 hypothetical protein compare
Atu5494 +0.5 2.1 hypothetical protein compare
Atu5415 +0.5 2.3 hypothetical protein compare
Atu2041 +0.5 1.6 acetyltransferase compare
Atu0886 +0.5 0.9 hypothetical protein compare
Atu0751 +0.5 2.7 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu4117 +0.5 2.3 dipeptide ABC transporter ATPase compare
Atu5444 +0.5 1.8 short-chain dehydrogenase compare
Atu5492 +0.5 2.4 hypothetical protein compare
Atu2324 +0.5 1.9 ureidoglycolate hydrolase compare
Atu1701 +0.5 1.2 protein-L-isoaspartate O-methyltransferase compare
Atu6128 +0.5 2.4 Conjugative pilin processing protease compare
Atu3647 +0.5 1.6 hypothetical protein compare
Atu0573 +0.5 2.3 transcriptional regulator compare
Atu2135 +0.5 2.9 transcriptional regulator, TetR family compare
Atu5196 +0.5 1.9 hypothetical protein compare
Atu0206 +0.5 2.4 hypothetical protein compare
Atu4670 +0.5 2.2 hypothetical protein compare
Atu5144 +0.5 1.8 putative peptidase compare
Atu0049 +0.5 1.7 hypothetical protein compare
Atu5130 +0.5 1.3 attachment protein compare
Atu0470 +0.5 1.2 hypothetical protein compare
Atu6186 +0.5 1.3 virA/G regulated protein compare
Atu2582 +0.4 2.3 UDP-glucose/GDP-mannose dehydrogenase compare
Atu2626 +0.4 1.8 hypothetical protein compare
Atu0101 +0.4 1.7 cytochrome c compare
Atu3331 +0.4 2.2 hypothetical protein compare
Atu0413 +0.4 1.5 stress induced protein compare
Atu0524 +0.4 2.4 transcriptional regulator, LuxR family compare
Atu0557 +0.4 3.3 flagellum-specific ATP synthase compare
Atu2554 +0.4 0.9 lysyl-tRNA synthetase compare
Atu5419 +0.4 2.2 LysR family transcriptional regulator compare
Atu5107 +0.4 0.9 hypothetical protein compare
Atu2694 +0.4 1.4 hypothetical protein compare
Atu0892 +0.4 1.4 hypothetical protein compare
Atu2633 +0.4 1.2 RhtB family transporter compare
Atu1260 +0.4 0.9 hypothetical protein compare
Atu8143 +0.4 1.5 hypothetical protein compare
Atu1189 +0.4 1.8 hypothetical protein compare
Atu0107 +0.4 1.1 hypothetical protein compare
Atu6196 +0.4 2.0 arabinose phosphate phosphatase compare
Atu5480 +0.4 1.3 ABC transporter nucleotide binding/ATPase compare
Atu5164 +0.4 0.3 type IV secretion protein AvhB3 compare
Atu2526 +0.4 2.0 hypothetical protein compare
Atu0580 +0.4 1.5 flagellar biosynthetic protein compare
Atu5513 +0.4 0.4 cold shock protein compare
Atu2437 +0.4 1.8 hypothetical protein compare
Atu2665 +0.4 2.3 transcriptional regulator, MarR family compare
Atu5081 +0.4 2.0 ABC transporter membrane spanning protein (sugar) compare
Atu8177 +0.4 1.2 hypothetical protein compare
Atu2343 +0.4 1.6 acetyltransferase compare
Atu0546 +0.4 2.9 flagellar biosynthetic protein compare
Atu0504 +0.4 2.4 hypothetical protein compare
Atu1469 +0.4 1.4 hypothetical protein compare
Atu6159 +0.4 0.9 hypothetical protein compare
Atu4530 +0.4 2.2 TetR family transcriptional regulator compare
Atu5549 +0.4 1.7 hypothetical protein compare
Atu6067 +0.4 1.2 conserved hypothetical protein compare
Atu1608 +0.4 2.5 hypothetical protein compare
Atu5087 +0.4 1.9 two component sensor kinase compare
Atu3624 +0.4 1.8 stress induced morphogen compare
Atu6040 +0.4 0.8 conjugal transfer protein compare
Atu6028 +0.4 1.9 ABC transporter, nucleotide binding/ATPase protein (nopaline) compare
Atu5077 +0.4 1.2 hypothetical protein compare
Atu1888 +0.4 2.6 two component sensor kinase compare
Atu4749 +0.4 1.7 fructose transport system kinase compare
Atu5421 +0.4 1.6 ABC transporter membrane spanning protein (putrescine) compare
Atu0525 +0.4 1.9 transcriptional regulator, LuxR family compare
Atu3712 +0.4 0.7 hypothetical protein compare
Atu5133 +0.4 2.3 hypothetical protein compare
Atu0095 +0.4 1.6 hypothetical protein compare
Atu0570 +0.4 2.7 Chemotaxis protein compare
Atu1287 +0.4 1.2 hypothetical protein compare
Atu0435 +0.4 0.9 tRNA-Gly compare
Atu2201 +0.4 0.6 hydrolase compare
Atu5523 +0.4 1.9 ABC transporter membrane spanning protein (branched chain amino acid) compare
Atu0939 +0.4 1.3 PemI protein compare
Atu2406 +0.4 0.7 hypothetical protein compare
Atu3218 +0.3 1.1 hypothetical protein compare
Atu5530 +0.3 1.6 two component response regulator compare
Atu1307 +0.3 1.8 dihydroorotase compare
Atu1818 +0.3 1.2 hypothetical protein compare
Atu1021 +0.3 1.0 outer membrane protein compare
Atu0523 +0.3 2.6 flagellar M-ring protein compare
Atu4477 +0.3 1.9 TetR family transcriptional regulator compare
Atu0222 +0.3 2.2 components of type IV pilus compare
Atu5497 +0.3 1.2 hypothetical protein compare
Atu0550 +0.3 2.4 flagellar P-ring protein precursor compare
Atu3295 +0.3 1.4 hypothetical protein compare
Atu2293 +0.3 1.0 hypothetical protein compare
Atu6095 +0.3 1.4 conserved hypothetical protein compare
Atu1559 +0.3 1.5 hypothetical protein compare
Atu1629 +0.3 0.6 transcriptional regulator, ArsR family compare
Atu8095 +0.3 1.8 hypothetical protein compare
Atu4094 +0.3 1.9 hypothetical protein compare
Atu6020 +0.3 1.1 conserved hypothetical protein compare
Atu2583 +0.3 2.7 glycosyltransferase compare
Atu0934 +0.3 2.3 hypothetical protein compare
Atu5498 +0.3 1.4 oxidoreductase with iron-sulfur subunit compare
Atu1739 +0.3 1.4 permease compare
Atu2783 +0.3 1.6 acetyltransferase compare
Atu5091 +0.3 1.7 Curdlan synthesis protein compare
Atu2282 +0.3 1.7 thymidine kinase compare
Atu5531 +0.3 2.1 ABC transporter substrate binding protein compare
Atu5490 +0.3 1.3 ECF family RNA polymerase sigma factor compare
Atu6085 +0.3 1.9 ABC transporter, substrate binding protein (nitrate/sulfonate) compare
Atu5175 +0.3 1.3 two component response regulator compare
Atu0492 +0.3 1.7 hypothetical protein compare
Atu6137 +0.3 1.5 hypothetical protein compare
Atu4176 +0.3 1.5 hypothetical protein compare
Atu1973 +0.3 1.2 hypothetical protein compare
Atu1640 +0.3 1.5 hypothetical protein compare
Atu0300 +0.3 1.7 methyltransferase compare
Atu8197 +0.3 1.7 NorF protein compare
Atu1354 +0.3 0.6 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu6149 +0.3 0.8 hypothetical protein compare
Atu6120 +0.3 1.1 HNS-type DNA binding protein compare
Atu4466 +0.3 2.0 oxidoreductase compare
Atu2234 +0.3 1.0 hypothetical protein compare
Atu5121 +0.3 1.7 two component response regulator compare
Atu0529 +0.3 1.9 aspartate transaminase compare
Atu0852 +0.3 1.8 transcriptional regulator, MarR family compare
Atu8133 +0.3 2.0 hypothetical protein compare
Atu5159 +0.3 0.8 hypothetical protein compare
Atu5207 +0.3 1.3 hypothetical protein compare
Atu0365 +0.3 2.1 hypothetical protein compare
Atu1499 +0.3 2.0 penicillin binding protein compare
Atu4410 +0.3 1.4 periplasmic nitrate reductase, cytochrome c-type protein compare
Atu3631 +0.3 1.7 hypothetical protein compare
Atu8023 +0.3 0.8 hypothetical protein compare
Atu0224 +0.3 1.7 components of type IV pilus, pilin subunit compare
Atu3480 +0.3 1.6 hydroxymethylglutaryl-CoA lyase compare
Atu4145 +0.3 2.1 hypothetical protein compare
Atu3506 +0.3 1.5 hypothetical protein compare
Atu6104 +0.3 0.9 conserved hypothetical protein compare
Atu5063 +0.3 1.4 RpiR family transcriptional regulator compare
Atu8041 +0.3 1.4 hypothetical protein compare
Atu1911 +0.3 1.7 hypothetical protein compare
Atu1968 +0.3 0.7 hypothetical protein compare
Atu1830 +0.3 1.4 bacterioferritin comigratory protein compare
Atu6160 +0.3 0.9 conserved hypothetical protein compare
Atu1835 +0.3 0.7 hypothetical protein compare
Atu2352 +0.3 0.5 hypothetical protein compare
Atu8082 +0.3 1.0 hypothetical protein compare
Atu6179 +0.3 0.8 virA/G regulated protein compare
Atu1847 +0.3 0.9 hypothetical protein compare
Atu8116 +0.3 1.6 hypothetical protein compare
Atu3392 +0.3 1.2 methyltransferase compare
Atu4281 +0.3 1.5 amino acid ABC transporter permease compare
Atu8024 +0.3 2.0 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For nitrogen source Hydantoin in Agrobacterium fabrum C58

For nitrogen source Hydantoin across organisms