Experiment set3IT030 for Pseudomonas simiae WCS417

Compare to:

Sodium octanoate carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
PS417_22065 -5.4 -9.8 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) conserved
PS417_00725 -5.2 -6.2 RND transporter conserved
PS417_00710 -5.1 -14.2 fusaric acid resistance protein conserved
PS417_25960 -5.0 -13.1 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) conserved
PS417_00720 -4.4 -8.9 membrane protein conserved
PS417_00715 -3.2 -6.2 required for octanoate transport, together with NodT, MFP, and FUSC proteins (PS417_00725, PS417_00720, PS417_00710) (from data) conserved
PS417_25975 -2.9 -9.1 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) conserved
PS417_04735 -2.8 -7.3 LysR family transcriptional regulator conserved
PS417_21010 -2.8 -7.4 ribonuclease activity regulator protein RraA conserved
PS417_17395 -2.7 -8.2 MFS transporter compare
PS417_24805 -2.6 -9.7 Fis family transcriptional regulator compare
PS417_24810 -2.6 -7.6 aldehyde dehydrogenase compare
PS417_17390 -2.5 -5.6 DSBA oxidoreductase compare
PS417_19965 -2.3 -14.6 histidine kinase compare
PS417_08430 -2.2 -5.0 phospho-2-dehydro-3-deoxyheptonate aldolase conserved
PS417_11700 -2.2 -13.2 ligand-gated channel compare
PS417_01265 -2.0 -11.0 CbbBc protein conserved
PS417_06060 -2.0 -10.8 phosphoenolpyruvate carboxylase conserved
PS417_17420 -1.9 -6.4 ethanol oxidation regulatory protein ercA (from data) compare
PS417_13120 -1.9 -7.3 aspartyl beta-hydroxylase conserved
PS417_25920 -1.8 -8.2 pyrroloquinoline quinone biosynthesis protein PqqF compare
PS417_21395 -1.6 -8.4 radical SAM protein compare
PS417_10515 -1.2 -5.3 acetyl-CoA acetyltransferase conserved
PS417_16525 -1.2 -6.9 isocitrate dehydrogenase compare
PS417_19945 +1.5 9.8 MarR family transcriptional regulator compare
PS417_23890 +1.6 11.3 ATPase compare
PS417_19995 +2.1 12.4 Long-chain fatty acid transport protein compare


Specific phenotypes for carbon source Sodium octanoate across organisms