Experiment set3IT027 for Pseudomonas simiae WCS417

Compare to:

Inosine carbon source

200 most important genes:

  gene name fitness t score description  
PS417_01575 -9.6 -5.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_23805 -7.9 -5.5 acetolactate synthase 3 regulatory subunit compare
PS417_04415 -7.6 -5.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_01565 -7.0 -3.9 imidazole glycerol phosphate synthase compare
PS417_25720 -6.8 -10.4 anthranilate synthase component II compare
PS417_18595 -6.6 -5.3 3-isopropylmalate dehydratase compare
PS417_18585 -6.4 -7.6 3-isopropylmalate dehydrogenase compare
PS417_27040 -6.2 -3.4 3-phosphoglycerate dehydrogenase compare
PS417_18560 -6.1 -8.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_25725 -6.0 -16.6 anthranilate synthase component I compare
PS417_02510 -5.8 -9.8 ATP phosphoribosyltransferase regulatory subunit compare
PS417_26740 -5.7 -8.6 homoserine acetyltransferase compare
PS417_02005 -5.7 -12.7 glutamate synthase compare
PS417_01850 -5.6 -10.1 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_23800 -5.6 -12.7 ketol-acid reductoisomerase compare
PS417_18600 -5.5 -5.4 isopropylmalate isomerase compare
PS417_04420 -5.4 -14.0 histidinol dehydrogenase compare
PS417_23810 -5.1 -11.5 acetolactate synthase 3 catalytic subunit compare
PS417_27795 -5.0 -2.0 orotate phosphoribosyltransferase compare
PS417_01855 -5.0 -3.9 phosphoribosyl-AMP cyclohydrolase compare
PS417_22690 -5.0 -6.8 phosphogluconate dehydratase compare
PS417_12855 -5.0 -5.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_23545 -4.9 -3.7 gamma-glutamyl kinase compare
PS417_24745 -4.8 -7.4 gamma-glutamyl phosphate reductase compare
PS417_23995 -4.8 -1.9 preprotein translocase subunit SecG compare
PS417_23110 -4.8 -9.9 2-isopropylmalate synthase compare
PS417_19420 -4.7 -5.9 OHCU decarboxylase conserved
PS417_00185 -4.7 -6.5 tryptophan synthase subunit beta compare
PS417_02000 -4.6 -16.1 glutamate synthase compare
PS417_16465 -4.5 -12.8 sirohydrochlorin ferrochelatase compare
PS417_18530 -4.5 -5.1 O-succinylhomoserine sulfhydrylase compare
PS417_19415 -4.4 -2.8 allantoinase compare
PS417_00180 -4.2 -4.7 tryptophan synthase subunit alpha compare
PS417_26745 -4.2 -6.8 methionine biosynthesis protein MetW compare
PS417_25710 -4.1 -2.3 indole-3-glycerol-phosphate synthase compare
PS417_01580 -4.0 -2.0 imidazole glycerol phosphate synthase compare
PS417_08805 -3.9 -13.2 hydroxypyruvate isomerase conserved
PS417_05595 -3.8 -7.6 ornithine carbamoyltransferase compare
PS417_26995 -3.7 -9.0 phosphoserine phosphatase compare
PS417_06375 -3.6 -2.0 deoxycytidine triphosphate deaminase compare
PS417_26730 -3.6 -2.0 pyrroline-5-carboxylate reductase compare
PS417_27195 -3.5 -2.8 N-acetylglutamate synthase compare
PS417_01710 -3.5 -4.4 histidine utilization repressor compare
PS417_08125 -3.5 -2.3 prephenate dehydratase compare
PS417_12290 -3.4 -6.0 sulfite reductase compare
PS417_19425 -3.4 -1.9 allantoicase compare
PS417_08670 -3.4 -6.7 molybdopterin biosynthesis protein B compare
PS417_26890 -3.3 -6.4 dihydroxy-acid dehydratase compare
PS417_25715 -3.1 -4.4 anthranilate phosphoribosyltransferase compare
PS417_20160 -3.0 -4.3 cysteine synthase compare
PS417_08810 -3.0 -13.4 glyoxylate carboligase (EC 4.1.1.47) (from data) conserved
PS417_02415 -2.9 -8.9 phosphoserine phosphatase compare
PS417_23900 -2.8 -12.6 poly(A) polymerase compare
PS417_11845 -2.8 -5.3 RpiR family transcriptional regulator compare
PS417_18400 -2.8 -3.9 D-ribose ABC transporter, ATPase component RbsA (from data) compare
PS417_18395 -2.8 -3.1 D-ribose ABC transporter, permease component RbsC (from data) compare
PS417_24155 -2.7 -4.1 ATP-binding protein compare
PS417_01560 -2.6 -2.8 imidazoleglycerol-phosphate dehydratase compare
PS417_21395 -2.6 -13.3 radical SAM protein compare
PS417_08675 -2.5 -9.7 molybdenum cofactor biosynthesis protein MoaA compare
PS417_09725 -2.5 -8.6 transporter compare
PS417_27835 -2.5 -7.7 endoribonuclease compare
PS417_04865 -2.4 -4.7 molybdenum cofactor biosynthesis protein MoaC compare
PS417_20895 -2.4 -12.6 molybdenum cofactor sulfurylase conserved
PS417_20885 -2.4 -9.9 Xanthine dehydrogenase (EC 1.17.1.4) (from data) conserved
PS417_22385 -2.3 -10.7 quinolinate synthase A compare
PS417_04875 -2.3 -2.1 molybdenum cofactor biosynthesis protein MoaE compare
PS417_14940 -2.3 -3.7 LysR family transcriptional regulator compare
PS417_20890 -2.3 -12.7 Xanthine dehydrogenase (EC 1.17.1.4) (from data) conserved
PS417_20985 -2.2 -4.4 porin compare
PS417_01605 -2.2 -2.6 phosphoglycerate mutase compare
PS417_16990 -2.2 -9.4 acyl-CoA dehydrogenase compare
PS417_21035 -2.2 -13.4 multidrug transporter compare
PS417_03925 -2.2 -8.0 nicotinate-nucleotide pyrophosphorylase compare
PS417_06200 -2.1 -6.8 protein-PII uridylyltransferase compare
PS417_08220 -2.1 -1.6 epimerase compare
PS417_19430 -2.1 -4.6 ureidoglycolate hydrolase conserved
PS417_27010 -2.1 -10.2 threonine dehydratase compare
PS417_26985 -2.0 -5.5 phosphoenolpyruvate-protein phosphotransferase compare
PS417_22565 -2.0 -2.2 formyltetrahydrofolate deformylase compare
PS417_21125 -1.9 -8.6 phosphoadenosine phosphosulfate reductase compare
PS417_23770 -1.9 -3.4 exodeoxyribonuclease V subunit alpha compare
PS417_19395 -1.9 -8.1 guanine permease conserved
PS417_09915 -1.8 -2.7 hypothetical protein compare
PS417_27035 -1.7 -4.7 FAD-linked oxidase compare
PS417_19435 -1.7 -8.0 urate hydroxylase (1.7.3.3) (from data) conserved
PS417_20610 -1.7 -2.0 hypothetical protein compare
PS417_01570 -1.7 -0.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_22520 -1.6 -2.2 histidine kinase compare
PS417_08580 -1.6 -6.7 histidine kinase compare
PS417_08230 -1.6 -2.8 lipopolysaccharide biosynthesis protein RfbH compare
PS417_04180 -1.6 -4.4 GntR family transcriptional regulator compare
PS417_02555 -1.6 -11.4 exoribonuclease R compare
PS417_13510 -1.5 -2.0 polyketide cyclase compare
PS417_18390 -1.5 -6.0 LacI family transcriptional regulator compare
PS417_21705 -1.5 -6.4 arginine N-succinyltransferase compare
PS417_20025 -1.5 -2.3 alpha-ribazole phosphatase compare
PS417_10995 -1.5 -3.2 GntR family transcriptional regulator compare
PS417_23950 -1.5 -2.3 polynucleotide phosphorylase/polyadenylase compare
PS417_24585 -1.5 -8.6 AMP nucleosidase compare
PS417_06710 -1.4 -2.6 beta-ketoadipyl CoA thiolase compare
PS417_08365 -1.4 -1.5 hypothetical protein compare
PS417_27875 -1.4 -7.3 histidine kinase compare
PS417_06680 -1.4 -8.6 nuclease PIN compare
PS417_16490 -1.4 -2.5 cell division protein FtsK compare
PS417_21750 -1.3 -10.8 acetyl-CoA synthetase compare
PS417_22210 -1.3 -2.0 AraC family transcriptional regulator compare
PS417_09715 -1.3 -3.4 hypothetical protein compare
PS417_12310 -1.3 -8.5 methionine synthase compare
PS417_08155 -1.3 -2.4 integration host factor subunit beta compare
PS417_17780 -1.3 -1.9 Ais protein compare
PS417_07115 -1.3 -8.2 L-aspartate oxidase compare
PS417_09210 -1.3 -1.5 TetR family transcriptional regulator compare
PS417_08025 -1.2 -2.1 acetylornithine aminotransferase compare
PS417_21630 -1.2 -2.5 magnesium transporter compare
PS417_12075 -1.2 -6.5 DNA-binding protein compare
PS417_09705 -1.2 -4.4 hypothetical protein compare
PS417_18590 -1.2 -2.3 SAM-dependent methyltransferase compare
PS417_22570 -1.2 -1.4 H-NS histone compare
PS417_21700 -1.1 -5.4 arginine N-succinyltransferase compare
PS417_18780 -1.1 -1.6 flavin reductase compare
PS417_20665 -1.0 -5.3 hypothetical protein compare
PS417_08195 -1.0 -5.7 hypothetical protein compare
PS417_21480 -1.0 -1.9 23S rRNA pseudouridylate synthase compare
PS417_21030 -1.0 -5.6 GntR family transcriptional regulator compare
PS417_18690 -1.0 -3.1 aromatic amino acid aminotransferase compare
PS417_24835 -1.0 -3.4 hypothetical protein compare
PS417_19835 -1.0 -1.3 flagellar biosynthesis protein FliS compare
PS417_07240 -0.9 -2.8 Transcriptional regulator of deoxyribose catabolism (from data) compare
PS417_06205 -0.9 -5.1 methionine aminopeptidase compare
PS417_08245 -0.9 -1.1 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_03045 -0.9 -2.0 hypothetical protein compare
PS417_19335 -0.9 -3.0 isochorismatase compare
PS417_09695 -0.9 -1.7 hydrolase compare
PS417_01635 -0.9 -5.6 nitrogen regulation protein NR(I) compare
PS417_17565 -0.9 -3.4 branched-chain amino acid aminotransferase compare
PS417_02805 -0.9 -1.6 urease subunit gamma compare
PS417_12565 -0.9 -2.6 2-dehydro-3-deoxygluconokinase compare
PS417_17510 -0.9 -6.1 histidine kinase compare
PS417_22445 -0.9 -3.3 ATP-dependent DNA helicase RuvB compare
PS417_26040 -0.8 -2.7 malate synthase compare
PS417_10815 -0.8 -3.8 TetR family transcriptional regulator compare
PS417_27305 -0.8 -3.7 5-formyltetrahydrofolate cyclo-ligase compare
PS417_07560 -0.8 -1.4 universal stress protein UspA compare
PS417_08225 -0.8 -2.7 acetolactate synthase compare
PS417_04270 -0.8 -5.0 ribonuclease G compare
PS417_14140 -0.8 -2.3 membrane protein compare
PS417_08430 -0.8 -3.2 phospho-2-dehydro-3-deoxyheptonate aldolase compare
PS417_26005 -0.8 -5.0 biotin synthase compare
PS417_01145 -0.8 -1.1 taurine transporter ATP-binding subunit compare
PS417_27435 -0.8 -3.6 polyphosphate kinase compare
PS417_09720 -0.8 -2.0 methyltransferase compare
PS417_00295 -0.8 -4.8 hypothetical protein compare
PS417_23380 -0.8 -2.0 cytochrome o ubiquinol oxidase subunit III compare
PS417_05235 -0.8 -1.8 peptidase inhibitor I42 compare
PS417_24290 -0.8 -2.4 hypothetical protein compare
PS417_21070 -0.8 -2.3 aconitate hydratase compare
PS417_06895 -0.7 -2.4 DNA-binding protein compare
PS417_17515 -0.7 -2.3 GfdT protein compare
PS417_21320 -0.7 -3.4 transcriptional regulator compare
PS417_09710 -0.7 -2.2 dehydrogenase compare
PS417_28220 -0.7 -1.2 LysR family transcriptional regulator compare
PS417_23375 -0.7 -1.4 cytochrome C oxidase compare
PS417_17485 -0.7 -3.7 membrane protein compare
PS417_26510 -0.7 -5.2 5,10-methylenetetrahydrofolate reductase compare
PS417_12535 -0.7 -2.0 nitrilase compare
PS417_16715 -0.7 -1.4 DoxX family protein compare
PS417_25815 -0.7 -2.1 magnesium transporter ApaG compare
PS417_01290 -0.7 -0.9 ADP-ribose diphosphatase compare
PS417_25730 -0.7 -2.5 phosphoglycolate phosphatase compare
PS417_19620 -0.7 -1.8 hypothetical protein compare
PS417_26145 -0.7 -1.6 hypothetical protein compare
PS417_23315 -0.7 -1.1 transcriptional regulator compare
PS417_23370 -0.7 -3.7 protoheme IX farnesyltransferase compare
PS417_25155 -0.7 -1.5 hypothetical protein compare
PS417_08200 -0.7 -2.2 hypothetical protein compare
PS417_19200 -0.7 -2.9 fumarate hydratase compare
PS417_16195 -0.7 -0.9 AraC family transcriptional regulator compare
PS417_11930 -0.7 -3.7 hypothetical protein compare
PS417_05540 -0.7 -3.0 histidine kinase compare
PS417_04410 -0.7 -0.8 hypothetical protein compare
PS417_14075 -0.7 -1.6 hypothetical protein compare
PS417_23500 -0.7 -4.7 D-erythro-7,8-dihydroneopterin triphosphate epimerase compare
PS417_08380 -0.7 -3.5 ABC transporter ATP-binding protein compare
PS417_00370 -0.7 -0.9 hypothetical protein compare
PS417_08205 -0.6 -2.2 acetyltransferase compare
PS417_00565 -0.6 -2.4 NAD(P) transhydrogenase compare
PS417_22870 -0.6 -1.1 lipoprotein compare
PS417_18070 -0.6 -0.9 general secretion pathway protein GspH compare
PS417_16020 -0.6 -1.4 LysR family transcriptional regulator compare
PS417_05825 -0.6 -2.4 cytochrome D ubiquinol oxidase subunit II compare
PS417_16475 -0.6 -2.0 camphor resistance protein CrcB compare
PS417_08135 -0.6 -2.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_16255 -0.6 -3.2 RNA polymerase sigma factor compare
PS417_04960 -0.6 -1.3 hypothetical protein compare
PS417_17240 -0.6 -2.6 trigger factor compare
PS417_16495 -0.6 -2.3 leucyl/phenylalanyl-tRNA--protein transferase compare
PS417_08620 -0.6 -0.8 hypothetical protein compare
PS417_03260 -0.6 -1.1 5S ribosomal RNA compare
PS417_24935 -0.6 -0.9 hypothetical protein compare


Specific Phenotypes

For 10 genes in this experiment

For carbon source Inosine in Pseudomonas simiae WCS417

For carbon source Inosine across organisms