Experiment set3IT026 for Agrobacterium fabrum C58

Compare to:

6-aminocaproic acid nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu3469 -4.4 -4.2 phosphoglyceromutase compare
Atu3706 -3.9 -11.6 D-3-phosphoglycerate dehydrogenase compare
Atu1359 -3.6 -2.2 dnaK deletion suppressor protein compare
Atu0099 -3.3 -14.1 prephenate dehydratase compare
Atu0035 -3.2 -10.1 phosphoenolpyruvate carboxykinase compare
Atu3707 -3.1 -5.6 phosphoserine aminotransferase compare
Atu2040 -3.0 -6.6 phosphoserine phosphatase compare
Atu0678 -3.0 -9.3 histidyl-tRNA synthetase compare
Atu3739 -2.8 -5.0 phosphoglycerate kinase compare
Atu1750 -2.8 -5.8 phosphoribosyl c-AMP cyclohydrolase compare
Atu0679 -2.8 -8.0 ATP phosphoribosyltransferase compare
Atu1446 -2.8 -4.1 two component response regulator compare
Atu0039 -2.7 -3.5 imidazoleglycerol-phosphate synthase cyclase compare
Atu1030 -2.6 -2.0 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0041 -2.6 -2.8 glutamine amidotransferase compare
Atu0400 -2.5 -5.7 orotate phosphoribosyltransferase compare
Atu1687 -2.5 -11.4 anthranilate phosphoribosyltransferase compare
Atu3740 -2.5 -9.5 fructose bisphosphate aldolase compare
Atu5430 -2.4 -1.6 hypothetical protein compare
Atu0017 -2.4 -4.7 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0043 -2.3 -4.1 imidazoleglycerol-phosphate dehydratase compare
Atu2650 -2.3 -13.7 glycerol-3-phosphate dehydrogenase compare
Atu2289 -2.2 -13.4 anthranilate synthase component I and II compare
Atu1308 -2.2 -8.5 aspartate carbamoyl transferase catalytic subunit compare
Atu3293 -2.2 -8.8 D-amino acid dehydrogenase small subunit compare
Atu0399 -2.1 -5.4 dihydroorotase compare
Atu1445 -2.1 -6.3 two component sensor kinase compare
Atu0537 -2.1 -8.1 histidinol dehydrogenase compare
Atu0030 -2.1 -2.3 phosphocarrier protein HPr compare
Atu0038 -2.1 -6.8 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1688 -2.1 -6.6 indole-3-glycerol-phosphate synthase compare
Atu0040 -2.0 -1.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0346 -2.0 -4.1 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1140 -2.0 -4.5 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3754 -2.0 -7.2 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3008 -2.0 -1.6 hypothetical protein compare
Atu0486 -1.9 -4.3 dihydroorotate dehydrogenase compare
Atu1075 -1.9 -8.1 amidophosphoribosyltransferase compare
Atu1844 -1.9 -3.9 Phosphoribosylformylglycinamidine synthetase compare
Atu2790 -1.9 -3.5 3-isopropylmalate dehydratase, small subunit compare
Atu5115 -1.8 -1.7 hypothetical protein compare
Atu2036 -1.8 -10.9 acetolactate synthase III, large subunit compare
Atu2207 -1.8 -3.5 two component sensor kinase compare
Atu0332 -1.7 -8.3 RNA polymerase sigma-54 factor compare
Atu1307 -1.7 -5.6 dihydroorotase compare
Atu3009 -1.7 -2.0 exopolysaccharide production protein compare
Atu2709 -1.7 -11.5 3-isopropylmalate dehydratase, large subunit compare
Atu5142 -1.7 -1.3 hypothetical protein compare
Atu2747 -1.6 -9.4 hypothetical protein compare
Atu2718 -1.6 -7.7 homoserine O-succinyltransferase compare
Atu4711 -1.6 -5.7 two component sensor kinase compare
Atu2791 -1.6 -7.8 3-isopropylmalate dehydrogenase compare
Atu3300 -1.6 -8.4 aminotransferase compare
Atu1850 -1.6 -4.0 phosphoribosylformylglycinamidine synthetase II compare
Atu0298 -1.6 -7.1 orotidine 5 compare
Atu2264 -1.6 -9.3 2-isopropylmalate synthase compare
Atu5186 -1.6 -1.5 hypothetical protein compare
Atu4505 -1.6 -9.0 LacI family transcriptional regulator compare
Atu1141 -1.5 -4.3 Phosphoribosylglycinamide synthetase compare
Atu1205 -1.5 -9.7 threonine dehydratase compare
Atu1620 -1.5 -10.1 triosephosphate isomerase compare
Atu8087 -1.5 -1.5 putative peptidoglycan binding protein compare
Atu0647 -1.5 -6.5 phosphoribosylamine--glycine ligase compare
Atu3755 -1.4 -4.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1845 -1.3 -3.4 phosphoribosylformylglycinamidine synthase I compare
Atu1163 -1.3 -1.9 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0803 -1.3 -9.6 pyruvate,orthophosphate dikinase compare
Atu3012 -1.2 -1.5 hypothetical protein compare
Atu1629 -1.2 -1.7 transcriptional regulator, ArsR family compare
Atu3301 -1.2 -7.7 short-chain alcohol dehydrogenase compare
Atu0225 -1.2 -1.2 hypothetical protein compare
Atu1588 -1.2 -6.1 homoserine dehydrogenase compare
Atu0536 -1.2 -5.8 hypothetical protein compare
Atu2155 -1.2 -9.2 methionine synthase compare
Atu6098 -1.2 -0.5 transcriptional regulator, HTH family compare
Atu3885 -1.2 -7.5 inositol monophosphatase compare
Atu2057 -1.2 -2.2 DNA helicase II compare
Atu6189 -1.2 -0.7 protein secretion chaperone compare
Atu0361 -1.1 -2.7 transcriptional regulator compare
Atu5485 -1.1 -1.5 hypothetical protein compare
Atu0026 -1.1 -1.3 hypothetical protein compare
Atu0432 -1.1 -5.5 O-succinylhomoserine sulfhydrylase compare
Atu1810 -1.1 -1.7 hypothetical protein compare
Atu1462 -1.1 -7.4 glycine cleavage system protein P2 compare
Atu0894 -1.0 -2.7 ABC transporter, membrane spanning protein compare
Atu5045 -1.0 -1.2 hypothetical protein compare
Atu1464 -1.0 -4.8 glycine cleavage system T protein, aminomethyltransferase compare
Atu5449 -1.0 -2.5 heat-shock protein compare
Atu0031 -1.0 -1.4 PTS system, IIA component compare
Atu0086 -1.0 -1.3 ribosome-binding factor A compare
Atu0354 -1.0 -2.0 ferric uptake regulator compare
Atu0189 -0.9 -2.3 ABC transporter, membrane spanning protein (peptide) compare
Atu4317 -0.9 -2.2 TetR family transcriptional regulator compare
Atu5010 -0.9 -1.5 hypothetical protein compare
Atu4617 -0.9 -7.0 dTDP-D-glucose-4,6-dehydratase compare
Atu1463 -0.9 -5.3 glycine cleavage system component H compare
Atu8053 -0.9 -1.5 hypothetical protein compare
Atu6045 -0.9 -0.7 replication protein C compare
Atu3730 -0.9 -1.0 hypothetical protein compare
Atu4166 -0.9 -2.3 UDP-glucose 4-epimerase compare
Atu4618 -0.9 -6.2 dTDP-rhamnose-3,5-epimerase compare
Atu4173 -0.9 -2.4 phosphoenolpyruvate-protein phosphotransferase compare
Atu3908 -0.8 -5.9 GntR family transcriptional regulator compare
Atu3497 -0.8 -3.3 hypothetical protein compare
Atu2800 -0.8 -2.3 precorrin-3B C17-methyltransferase compare
Atu5148 -0.8 -1.9 hypothetical protein compare
Atu0357 -0.8 -4.4 phosphate starvation inducible protein compare
Atu0690 -0.8 -2.7 hypothetical protein compare
Atu1580 -0.8 -5.4 ABC transporter, nucleotide binding/ATPase protein (amino acid) compare
Atu1879 -0.8 -4.9 ABC transporter, substrate binding protein (amino acid) compare
Atu4616 -0.8 -1.3 dTDP-4-dehydrorhamnose reductase compare
Atu1774 -0.8 -4.6 ABC transporter, substrate binding protein (peptide) compare
Atu5026 -0.8 -1.9 hypothetical protein compare
Atu5145 -0.8 -1.5 acetyltransferase compare
Atu1573 -0.8 -1.1 hypothetical protein compare
Atu2183 -0.8 -4.7 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu2555 -0.8 -2.5 L-lysine 2,3-aminomutase compare
Atu5088 -0.7 -1.1 hypothetical protein compare
Atu0115 -0.7 -0.9 hypothetical protein compare
Atu0986 -0.7 -1.2 hypothetical protein compare
Atu4615 -0.7 -4.3 glucose-1-phosphate thymidylyltransferase compare
Atu5513 -0.7 -0.6 cold shock protein compare
Atu4613 -0.7 -6.0 glycosyltransferase compare
Atu3353 -0.7 -5.7 mannose-1-phosphate guanylyltransferase compare
Atu3572 -0.7 -4.9 transcriptional regulator compare
Atu2123 -0.7 -2.1 methylenetetrahydrofolate reductase compare
Atu2376 -0.7 -1.2 hypothetical protein compare
Atu4773 -0.7 -1.5 two component response regulator compare
Atu3298 -0.7 -5.3 C4-dicarboxylate transporter DctA compare
Atu5064 -0.7 -2.3 MarR family transcriptional regulator compare
Atu4614 -0.7 -4.1 glycosyltransferase compare
Atu3120 -0.6 -1.1 hypothetical protein compare
Atu2777 -0.6 -4.5 hypothetical protein compare
Atu5414 -0.6 -3.2 Xaa-Pro dipeptidase compare
Atu0188 -0.6 -2.3 ABC transporter, membrane spanning protein (peptide) compare
Atu6072 -0.6 -1.9 thermophilic desulfurizing enzyme compare
Atu3296 -0.6 -4.3 two component response regulator for C4-dicarboxylate transport compare
Atu5458 -0.6 -2.6 isomerase/lactonizing enzyme compare
Atu5161 -0.6 -2.1 hypothetical protein compare
Atu1880 -0.6 -3.3 ABC transporter, membrane spanning protein (amino acid) compare
Atu8118 -0.6 -2.4 putative universal stress protein compare
Atu2710 -0.6 -3.9 hypothetical protein compare
Atu0953 -0.6 -1.0 hypothetical protein compare
Atu8061 -0.6 -1.9 hypothetical protein compare
Atu0421 -0.6 -1.0 ABC transporter, membrane spanning protein compare
Atu4055 -0.6 -3.7 endo-1,3-1,4-beta-glycanase compare
Atu0190 -0.6 -3.2 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1584 -0.6 -3.6 hypothetical protein compare
Atu0846 -0.6 -2.0 transcriptional regulator, MarR family compare
Atu3398 -0.6 -3.5 acetylornithine deacetylase compare
Atu3799 -0.6 -3.9 GntR family transcriptional regulator compare
Atu3468 -0.6 -0.7 hypothetical protein compare
Atu3292 -0.6 -3.8 alanine racemase compare
Atu5158 -0.6 -1.3 hypothetical protein compare
Atu5440 -0.6 -1.7 hypothetical protein compare
Atu6071 -0.6 -2.0 Zn-dependent hydrolases compare
Atu1570 -0.6 -0.7 hypothetical protein compare
Atu5483 -0.6 -2.2 GntR family transcriptional regulator compare
Atu0723 -0.5 -0.9 FAD dependent oxidoreductase compare
Atu6117 -0.5 -2.2 NTP pyrophosphohydrolase, MutT family compare
Atu4702 -0.5 -3.4 GntR family transcriptional regulator compare
Atu4894 -0.5 -2.7 transposase compare
Atu3311 -0.5 -4.5 phosphomannose isomerase compare
Atu8145 -0.5 -2.0 hypothetical protein compare
Atu1439 -0.5 -1.2 hypothetical protein compare
Atu2678 -0.5 -3.0 2'-5' RNA ligase compare
Atu0837 -0.5 -2.6 transcriptional regulator, MarR family compare
Atu5155 -0.5 -0.7 MarR family transcriptional regulator compare
Atu3075 -0.5 -2.5 TetR family transcriptional regulator compare
Atu3912 -0.5 -2.8 hypothetical protein compare
Atu5512 -0.5 -1.7 hypothetical protein compare
Atu8191 -0.5 -0.9 hypothetical protein compare
Atu3121 -0.5 -1.0 cold shock protein compare
Atu1103 -0.5 -2.1 rRNA-adenine N6,N6-dimethyltransferase compare
Atu5183 -0.5 -1.3 hypothetical protein compare
Atu2798 -0.5 -2.4 precorrin-6y methyltransferase compare
Atu1124 -0.5 -2.3 hypothetical protein compare
Atu6153 -0.5 -0.8 conserved hypothetical protein compare
Atu2827 -0.5 -1.9 hypothetical protein compare
Atu3291 -0.5 -2.6 Lpr family transcriptional regulator compare
Atu2267 -0.5 -2.4 hypothetical protein compare
Atu2787 -0.5 -0.7 hypothetical protein compare
Atu3910 -0.5 -1.7 LamB/YcsF family protein compare
Atu4609 -0.5 -3.8 glycosyltransferase compare
Atu6111 -0.5 -1.7 conserved hypothetical protein compare
Atu4217 -0.5 -1.2 TetR family transcriptional regulator compare
Atu0854 -0.5 -2.0 hypothetical protein compare
Atu2146 -0.5 -2.5 hypothetical protein compare
Atu2017 -0.5 -0.5 hypothetical protein compare
Atu1577 -0.5 -2.9 ABC transporter, substrate binding protein (amino acid) compare
Atu0025 -0.5 -1.0 hypothetical protein compare
Atu8088 -0.5 -1.3 hypothetical protein compare
Atu5206 -0.5 -2.9 LysR family transcriptional regulator compare
Atu0413 -0.5 -1.1 stress induced protein compare
Atu0681 -0.5 -1.5 hypothetical protein compare
Atu8012 -0.5 -1.1 hypothetical protein compare
Atu5505 -0.5 -2.1 two component response regulator compare
Atu1881 -0.5 -2.9 ABC transporter, membrane spanning protein (amino acid) compare
Atu2427 -0.5 -2.9 ABC transporter, membrane spanning protein compare
Atu2802 -0.5 -2.6 precorrin-8X methylmutase compare


Specific Phenotypes

For 5 genes in this experiment

For nitrogen source e-Amino-N-Caproic Acid in Agrobacterium fabrum C58

For nitrogen source e-Amino-N-Caproic Acid across organisms