Experiment set3IT024 for Echinicola vietnamensis KMM 6221, DSM 17526

Compare to:

D-Glucosamine Hydrochloride carbon source

200 most detrimental genes:

  gene name fitness t score description  
Echvi_3922 +1.6 6.7 hypothetical protein compare
Echvi_1356 +1.4 2.2 hypothetical protein compare
Echvi_0128 +1.3 3.2 hypothetical protein compare
Echvi_3764 +1.3 1.9 Predicted transcriptional regulators compare
Echvi_3918 +1.3 1.8 Histone H1-like protein Hc1. compare
Echvi_3924 +1.1 4.4 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 compare
Echvi_0395 +1.1 2.4 DNA repair proteins compare
Echvi_3914 +1.1 9.9 Transcriptional regulators compare
Echvi_4453 +1.1 1.3 hypothetical protein compare
Echvi_3923 +1.1 5.5 Fe2+-dicitrate sensor, membrane component compare
Echvi_3347 +1.1 1.5 hypothetical protein compare
Echvi_3870 +1.0 1.8 hypothetical protein compare
Echvi_1227 +1.0 1.0 hypothetical protein compare
Echvi_0604 +1.0 2.5 Predicted redox protein, regulator of disulfide bond formation compare
Echvi_2833 +0.9 3.2 L-serine dehydratase, iron-sulfur-dependent, beta subunit compare
Echvi_3189 +0.9 3.3 Uncharacterized protein conserved in bacteria (DUF2188). compare
Echvi_3068 +0.9 1.1 hypothetical protein compare
Echvi_3910 +0.9 5.7 Transcriptional regulator/sugar kinase compare
Echvi_1838 +0.9 1.1 hypothetical protein compare
Echvi_1586 +0.9 1.8 hypothetical protein compare
Echvi_1813 +0.9 1.1 Ribonuclease HI compare
Echvi_4305 +0.8 1.4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. compare
Echvi_1406 +0.8 2.5 hypothetical protein compare
Echvi_3564 +0.8 2.6 Uncharacterized enzyme of thiazole biosynthesis compare
Echvi_1266 +0.8 2.5 putative solute:sodium symporter small subunit compare
Echvi_0438 +0.8 2.9 hypothetical protein compare
Echvi_4383 +0.7 1.0 hypothetical protein compare
Echvi_1347 +0.7 1.8 DNA repair proteins compare
Echvi_1607 +0.7 1.4 Acylphosphatases compare
Echvi_3896 +0.7 2.0 PAP2 superfamily. compare
Echvi_2298 +0.7 1.5 hypothetical protein compare
Echvi_0342 +0.7 1.7 ATP-dependent DNA helicase, RecQ family compare
Echvi_2266 +0.7 5.7 Alanine dehydrogenase compare
Echvi_1247 +0.7 1.5 single stranded DNA-binding protein (ssb) compare
Echvi_0044 +0.6 1.2 protein RecA compare
Echvi_0720 +0.6 2.3 hypothetical protein compare
Echvi_3505 +0.6 0.6 hypothetical protein compare
Echvi_1821 +0.6 4.6 hypothetical protein compare
Echvi_2244 +0.6 2.1 hypothetical protein compare
Echvi_3824 +0.6 1.5 hypothetical protein compare
Echvi_4268 +0.6 3.3 hypothetical protein compare
Echvi_0538 +0.6 2.2 hypothetical protein compare
Echvi_1946 +0.6 1.2 hypothetical protein compare
Echvi_0186 +0.6 1.8 Predicted metal-binding, possibly nucleic acid-binding protein compare
Echvi_0291 +0.6 0.6 hypothetical protein compare
Echvi_1124 +0.6 2.2 Uncharacterized conserved protein compare
Echvi_2201 +0.6 1.5 hypothetical protein compare
Echvi_0594 +0.6 2.7 hypoxanthine phosphoribosyltransferase compare
Echvi_0169 +0.6 4.7 hypothetical protein compare
Echvi_1259 +0.6 1.5 methionine-R-sulfoxide reductase compare
Echvi_1865 +0.6 0.9 hypothetical protein compare
Echvi_2249 +0.6 1.2 hypothetical protein compare
Echvi_4375 +0.5 0.9 hypothetical protein compare
Echvi_1939 +0.5 1.4 Bacteroides conjugative transposon TraN protein compare
Echvi_0920 +0.5 0.8 hypothetical protein compare
Echvi_1183 +0.5 2.9 hypothetical protein compare
Echvi_4573 +0.5 4.2 Glycosyltransferases, probably involved in cell wall biogenesis compare
Echvi_3278 +0.5 1.7 hypothetical protein compare
Echvi_2005 +0.5 2.1 hypothetical protein compare
Echvi_4495 +0.5 2.8 Rrf2 family protein compare
Echvi_1297 +0.5 1.6 hypothetical protein compare
Echvi_4081 +0.5 1.0 Malic enzyme compare
Echvi_0440 +0.5 1.5 DNA repair proteins compare
Echvi_1180 +0.5 2.3 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family compare
Echvi_3498 +0.5 1.9 hypothetical protein compare
Echvi_1078 +0.5 2.0 Protein-L-isoaspartate carboxylmethyltransferase compare
Echvi_2503 +0.5 1.1 hypothetical protein compare
Echvi_0339 +0.5 2.3 Tetratricopeptide repeat. compare
Echvi_0822 +0.5 2.2 Acetyltransferases compare
Echvi_0016 +0.5 2.8 Predicted proline hydroxylase compare
Echvi_2955 +0.5 1.8 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Echvi_3701 +0.5 2.0 hypothetical protein compare
Echvi_2047 +0.5 3.0 RNA polymerase sigma factor, sigma-70 family compare
Echvi_3790 +0.5 3.0 bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family compare
Echvi_4025 +0.5 1.4 hypothetical protein compare
Echvi_3911 +0.5 4.2 alpha-1,2-mannosidase, putative compare
Echvi_4365 +0.5 0.8 hypothetical protein compare
Echvi_1419 +0.5 1.4 Predicted enzyme related to lactoylglutathione lyase compare
Echvi_0622 +0.5 3.3 gliding motility-associated protein GldL compare
Echvi_4678 +0.5 2.1 ABC-type Fe3+-siderophore transport system, permease component compare
Echvi_1588 +0.5 1.9 deoxyribose-phosphate aldolase compare
Echvi_1910 +0.5 1.8 hypothetical protein compare
Echvi_3057 +0.5 0.8 citrate synthase I (hexameric type) compare
Echvi_1603 +0.5 1.0 hypothetical protein compare
Echvi_3292 +0.5 0.4 hypothetical protein compare
Echvi_0158 +0.5 2.5 Predicted phosphosugar isomerases compare
Echvi_1081 +0.5 2.6 hypothetical protein compare
Echvi_0756 +0.5 1.4 hypothetical protein compare
Echvi_2267 +0.5 2.9 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Echvi_1152 +0.5 2.1 GTP-binding protein HflX compare
Echvi_0674 +0.5 4.0 hypothetical protein compare
Echvi_2824 +0.5 3.5 hypothetical protein compare
Echvi_4083 +0.5 4.4 hypothetical protein compare
Echvi_3999 +0.5 0.5 hypothetical protein compare
Echvi_0201 +0.4 1.9 alanine dehydrogenase compare
Echvi_3309 +0.4 1.5 Arsenate reductase and related proteins, glutaredoxin family compare
Echvi_1854 +0.4 0.7 tRNA compare
Echvi_1311 +0.4 3.7 gliding motility-associated lipoprotein GldJ compare
Echvi_2410 +0.4 1.6 Acetyltransferases compare
Echvi_3034 +0.4 1.7 conserved hypothetical protein compare
Echvi_3711 +0.4 1.0 hypothetical protein compare
Echvi_4553 +0.4 1.3 hypothetical protein compare
Echvi_4323 +0.4 2.0 Fe2+-dicitrate sensor, membrane component compare
Echvi_3369 +0.4 1.1 Protein of unknown function (DUF2752). compare
Echvi_0135 +0.4 2.2 Uncharacterized protein conserved in bacteria compare
Echvi_3651 +0.4 2.1 ABC-type molybdate transport system, ATPase component compare
Echvi_3223 +0.4 1.1 Mn-dependent transcriptional regulator compare
Echvi_0482 +0.4 1.2 Uncharacterized protein conserved in bacteria compare
Echvi_2322 +0.4 2.3 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Echvi_1490 +0.4 3.4 alanine racemase compare
Echvi_0459 +0.4 1.2 Fic/DOC family. compare
Echvi_3717 +0.4 3.5 Outer membrane protein/protective antigen OMA87 compare
Echvi_3304 +0.4 1.8 3-hydroxyacyl-CoA dehydrogenase compare
Echvi_2554 +0.4 1.3 hypothetical protein compare
Echvi_1302 +0.4 1.4 Predicted transcriptional regulators compare
Echvi_4659 +0.4 1.9 hypothetical protein compare
Echvi_4447 +0.4 2.1 Helix-turn-helix. compare
Echvi_3864 +0.4 2.6 Glycosyltransferase compare
Echvi_1662 +0.4 1.2 hypothetical protein compare
Echvi_1355 +0.4 1.6 Bacteroides conjugative transposon TraM protein compare
Echvi_0655 +0.4 2.9 hypothetical protein compare
Echvi_4656 +0.4 3.0 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Echvi_2310 +0.4 1.7 conserved hypothetical protein YidD compare
Echvi_3642 +0.4 1.4 NADH:ubiquinone oxidoreductase 24 kD subunit compare
Echvi_4023 +0.4 1.9 Cytochrome c peroxidase compare
Echvi_3194 +0.4 2.2 hypothetical protein compare
Echvi_2193 +0.4 3.3 Transcriptional regulators compare
Echvi_0808 +0.4 3.4 hypothetical protein compare
Echvi_2600 +0.4 2.8 Glycosyltransferases involved in cell wall biogenesis compare
Echvi_4527 +0.4 1.0 Plasmid stabilization system protein compare
Echvi_4237 +0.4 1.5 Predicted glycosyltransferases compare
Echvi_2462 +0.4 1.6 hypothetical protein compare
Echvi_3172 +0.4 1.2 hypothetical protein compare
Echvi_0219 +0.4 1.3 hypothetical protein compare
Echvi_0840 +0.4 1.7 hypothetical protein compare
Echvi_2447 +0.4 1.9 competence/damage-inducible protein CinA C-terminal domain compare
Echvi_4485 +0.4 1.7 Transposase and inactivated derivatives compare
Echvi_2829 +0.4 3.7 hypothetical protein compare
Echvi_2444 +0.4 2.6 Predicted cysteine protease (OTU family) compare
Echvi_3983 +0.4 2.4 Transcriptional regulator/sugar kinase compare
Echvi_2084 +0.4 3.4 Uncharacterized protein conserved in bacteria compare
Echvi_1752 +0.4 0.9 hypothetical protein compare
Echvi_4092 +0.4 1.4 hypothetical protein compare
Echvi_2402 +0.4 0.7 hypothetical protein compare
Echvi_3341 +0.4 1.9 Predicted membrane protein compare
Echvi_2789 +0.4 2.0 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) compare
Echvi_1335 +0.4 2.1 Universal stress protein UspA and related nucleotide-binding proteins compare
Echvi_0837 +0.4 1.2 RNA polymerase sigma factor, sigma-70 family compare
Echvi_0299 +0.4 3.0 gliding motility-associated ABC transporter permease protein GldF compare
Echvi_1538 +0.4 2.9 hypothetical protein compare
Echvi_0002 +0.4 2.4 Protein of unknown function (DUF3298). compare
Echvi_1034 +0.4 1.7 hypothetical protein compare
Echvi_0652 +0.4 1.9 Outer membrane protein compare
Echvi_0138 +0.4 3.1 hypothetical protein compare
Echvi_1292 +0.4 2.2 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Echvi_4376 +0.4 2.2 hypothetical protein compare
Echvi_3283 +0.4 0.8 Lactoylglutathione lyase and related lyases compare
Echvi_0893 +0.4 1.8 Nitroreductase compare
Echvi_3802 +0.4 2.9 Periplasmic protein involved in polysaccharide export compare
Echvi_4332 +0.4 1.8 Predicted ATPase compare
Echvi_0215 +0.4 1.6 phosphomethylpyrimidine kinase compare
Echvi_0946 +0.4 1.6 hypothetical protein compare
Echvi_4415 +0.4 1.6 Transcription antiterminator compare
Echvi_2889 +0.4 2.0 FixH. compare
Echvi_2124 +0.4 2.0 hypothetical protein compare
Echvi_0014 +0.4 3.3 PAS domain S-box compare
Echvi_2687 +0.4 1.5 Uncharacterized protein conserved in bacteria (DUF2141). compare
Echvi_3274 +0.4 1.7 tRNA pseudouridine 55 synthase compare
Echvi_1228 +0.4 1.7 Putative homoserine kinase type II (protein kinase fold) compare
Echvi_0973 +0.4 1.7 hypothetical protein compare
Echvi_0102 +0.4 1.4 Uncharacterized conserved protein compare
Echvi_2373 +0.4 1.8 hypothetical protein compare
Echvi_3467 +0.4 0.9 hypothetical protein compare
Echvi_0378 +0.4 1.0 hypothetical protein compare
Echvi_1203 +0.4 1.5 Predicted membrane protein compare
Echvi_3863 +0.4 0.8 Glycosyltransferase compare
Echvi_2880 +0.4 2.6 RNA polymerase sigma factor, sigma-70 family compare
Echvi_2365 +0.4 1.3 Response regulator containing a CheY-like receiver domain and an HD-GYP domain compare
Echvi_2945 +0.4 1.4 Domain of unknown function (DUF1905). compare
Echvi_0626 +0.4 2.4 hypothetical protein compare
Echvi_0351 +0.4 2.0 Predicted transcription factor, homolog of eukaryotic MBF1 compare
Echvi_0353 +0.4 2.5 hypothetical protein compare
Echvi_1334 +0.4 2.1 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II compare
Echvi_0621 +0.3 3.2 gliding motility-associated protein GldM compare
Echvi_1150 +0.3 2.2 Capsular polysaccharide biosynthesis protein compare
Echvi_0298 +0.3 3.1 gliding-associated putative ABC transporter substrate-binding component GldG compare
Echvi_1611 +0.3 1.1 hypothetical protein compare
Echvi_1319 +0.3 3.1 gliding motility-associated lipoprotein GldB compare
Echvi_2900 +0.3 1.5 hypothetical protein compare
Echvi_0300 +0.3 2.2 gliding motility-associated ABC transporter ATP-binding subunit GldA compare
Echvi_2932 +0.3 1.3 hypothetical protein compare
Echvi_0710 +0.3 1.8 hypothetical protein compare
Echvi_1705 +0.3 1.6 hypothetical protein compare
Echvi_4278 +0.3 0.7 hypothetical protein compare
Echvi_0938 +0.3 1.6 Protein of unknown function (DUF1572). compare
Echvi_0318 +0.3 1.2 mraZ protein compare
Echvi_3970 +0.3 2.1 hypothetical protein compare
Echvi_0640 +0.3 1.0 hypothetical protein compare
Echvi_4506 +0.3 1.8 Gluconolactonase compare
Echvi_0385 +0.3 1.5 Predicted transcription factor, homolog of eukaryotic MBF1 compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source D-Glucosamine Hydrochloride in Echinicola vietnamensis KMM 6221, DSM 17526

For carbon source D-Glucosamine Hydrochloride across organisms