Experiment set3IT023 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth with Carbenicillin disodium salt 0.0015 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CA264_19005 +5.6 46.5 SusC/RagA family TonB-linked outer membrane protein compare
CA264_08105 +3.9 24.7 NupC/NupG family nucleoside CNT transporter compare
CA264_05275 +3.5 10.1 MFS transporter compare
CA264_19885 +3.2 19.7 uridine kinase compare
CA264_06095 +3.0 7.0 hypothetical protein compare
CA264_17445 +2.8 7.7 peptidase M28 compare
CA264_17450 +2.6 7.3 acyl-CoA thioesterase compare
CA264_12515 +2.6 10.1 YebC/PmpR family DNA-binding transcriptional regulator compare
CA264_07750 +2.5 8.0 elongation factor P compare
CA264_15255 +2.4 13.3 alpha/beta hydrolase compare
CA264_14480 +2.3 13.3 large-conductance mechanosensitive channel compare
CA264_18120 +2.2 16.1 ABC transporter compare
CA264_05910 +2.2 9.4 RNA helicase compare
CA264_14740 +2.1 9.8 dihydroorotase compare
CA264_10855 +2.1 3.4 cell division protein compare
CA264_14475 +2.1 9.6 hypothetical protein compare
CA264_14920 +1.9 10.7 hypothetical protein compare
CA264_07245 +1.8 6.9 hypothetical protein compare
CA264_13170 +1.8 5.4 hypothetical protein compare
CA264_20570 +1.8 5.6 inorganic pyrophosphatase compare
CA264_06475 +1.7 2.1 hypothetical protein compare
CA264_00540 +1.7 12.3 translational GTPase TypA compare
CA264_13660 +1.7 6.6 putative DNA modification/repair radical SAM protein compare
CA264_07495 +1.6 4.4 GTP-binding protein YchF compare
CA264_01265 +1.6 4.6 50S ribosomal protein L9 compare
CA264_07800 +1.6 11.9 hypothetical protein compare
CA264_00835 +1.6 5.8 hypothetical protein compare
CA264_17320 +1.6 11.8 hypothetical protein compare
CA264_17455 +1.5 9.3 hypothetical protein compare
CA264_18060 +1.5 10.3 hypothetical protein compare
CA264_19010 +1.5 5.6 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
CA264_10920 +1.5 9.8 helix-turn-helix-type transcriptional regulator compare
CA264_11620 +1.4 9.6 hypothetical protein compare
CA264_08320 +1.4 4.8 hypothetical protein compare
CA264_11245 +1.4 5.6 hypothetical protein compare
CA264_04835 +1.4 9.8 ABC transporter ATP-binding protein compare
CA264_01990 +1.4 3.4 tRNA-Lys compare
CA264_18055 +1.4 9.0 hypothetical protein compare
CA264_07790 +1.4 10.4 ankryin compare
CA264_00725 +1.4 6.3 pyruvate kinase compare
CA264_15340 +1.4 4.2 hypothetical protein compare
CA264_14875 +1.4 11.1 hypothetical protein compare
CA264_13385 +1.3 10.4 hypoxanthine phosphoribosyltransferase compare
CA264_08690 +1.3 8.9 dipeptide epimerase compare
CA264_19030 +1.3 4.5 ribosomal subunit interface protein compare
CA264_06260 +1.3 7.3 N-acetyltransferase compare
CA264_13665 +1.3 6.1 hypothetical protein compare
CA264_20110 +1.3 7.1 DNA helicase RecQ compare
CA264_13340 +1.3 3.9 iron-sulfur cluster assembly accessory protein compare
CA264_05240 +1.3 7.5 glycerol acyltransferase compare
CA264_00040 +1.3 8.2 hypothetical protein compare
CA264_08125 +1.2 8.2 tetratricopeptide repeat protein compare
CA264_19450 +1.2 5.6 type I methionyl aminopeptidase compare
CA264_03445 +1.2 8.3 anhydro-N-acetylmuramic acid kinase compare
CA264_16965 +1.2 5.9 hypothetical protein compare
CA264_05020 +1.2 5.9 hypothetical protein compare
CA264_13670 +1.2 3.2 DNA starvation/stationary phase protection protein compare
CA264_10875 +1.2 1.2 MerP protein compare
CA264_18860 +1.1 8.2 TIGR00374 family protein compare
CA264_15250 +1.1 3.2 cbs domain containing protein compare
CA264_15950 +1.1 4.4 hypothetical protein compare
CA264_07150 +1.1 5.5 elongation factor 4 compare
CA264_10860 +1.1 0.7 hypothetical protein compare
CA264_06460 +1.1 6.6 NUDIX domain-containing protein compare
CA264_00865 +1.1 2.5 dihydroorotate dehydrogenase (quinone) compare
CA264_20700 +1.1 7.2 hypothetical protein compare
CA264_08095 +1.1 8.4 ABC transporter permease compare
CA264_05150 +1.1 5.8 response regulator compare
CA264_07460 +1.1 8.0 hypothetical protein compare
CA264_00165 +1.1 4.7 macrolide ABC transporter ATP-binding protein compare
CA264_15055 +1.1 5.3 MarR family transcriptional regulator compare
CA264_17900 +1.1 7.1 UDP-N-acetyl-D-galactosamine dehydrogenase compare
CA264_12490 +1.0 6.4 phosphohydrolase compare
CA264_02715 +1.0 6.3 UDP-glucose--dolichyl-phosphate glucosyltransferase compare
CA264_15970 +1.0 3.7 hypothetical protein compare
CA264_11830 +1.0 5.8 acetyl-CoA acetyltransferase compare
CA264_08100 +1.0 5.1 ABC transporter ATP-binding protein compare
CA264_11250 +1.0 8.1 hypothetical protein compare
CA264_19845 +1.0 5.9 hypothetical protein compare
CA264_18495 +1.0 3.6 four helix bundle protein compare
CA264_19675 +1.0 5.0 RNA pseudouridine synthase compare
CA264_10905 +1.0 6.7 phytoene synthase compare
CA264_16100 +0.9 1.5 hypothetical protein compare
CA264_07465 +0.9 3.5 hypothetical protein compare
CA264_14470 +0.9 2.8 hypothetical protein compare
CA264_08120 +0.9 6.7 electron transfer flavoprotein subunit alpha compare
CA264_01905 +0.9 4.9 cystathionine beta-synthase compare
CA264_06470 +0.9 3.6 YfcE family phosphodiesterase compare
CA264_17495 +0.9 5.6 hypothetical protein compare
CA264_05025 +0.9 4.2 ATP phosphoribosyltransferase compare
CA264_10965 +0.9 5.8 oligoendopeptidase F compare
CA264_08140 +0.9 4.9 oxidoreductase compare
CA264_19150 +0.9 6.1 TonB dependent receptor compare
CA264_05360 +0.9 5.4 ABC transporter compare
CA264_14625 +0.9 1.1 phosphoribosylformylglycinamidine synthase subunit PurS compare
CA264_11865 +0.9 2.5 hypothetical protein compare
CA264_03750 +0.9 7.0 hypothetical protein compare
CA264_04350 +0.9 4.4 alanine dehydrogenase compare
CA264_19680 +0.9 2.8 two-component sensor histidine kinase compare
CA264_08025 +0.9 6.9 GMP synthase (glutamine-hydrolyzing) compare
CA264_11890 +0.9 3.5 NADH oxidase compare
CA264_14195 +0.9 5.9 1-pyrroline-5-carboxylate dehydrogenase compare
CA264_10760 +0.9 2.7 alpha/beta hydrolase compare
CA264_04905 +0.8 6.4 acetyl-CoA carboxylase biotin carboxylase subunit compare
CA264_01385 +0.8 6.0 iron ABC transporter substrate-binding protein compare
CA264_05645 +0.8 5.3 L-serine dehydratase, iron-sulfur-dependent subunit beta compare
CA264_12070 +0.8 3.5 tRNA dimethylallyltransferase compare
CA264_01410 +0.8 1.4 ATP-dependent Clp protease proteolytic subunit compare
CA264_10870 +0.8 2.0 division/cell wall cluster transcriptional repressor MraZ compare
CA264_13215 +0.8 2.7 hypothetical protein compare
CA264_08940 +0.8 3.1 cysteine synthase B compare
CA264_14320 +0.8 0.9 tRNA-specific adenosine deaminase compare
CA264_19770 +0.8 3.5 ATPase compare
CA264_09340 +0.8 3.8 hypothetical protein compare
CA264_13755 +0.8 1.8 cystathionine beta-synthase compare
CA264_17885 +0.8 1.5 GAF domain-containing protein compare
CA264_00935 +0.8 2.2 hypothetical protein compare
CA264_18210 +0.8 3.1 L-serine dehydratase, iron-sulfur-dependent subunit alpha compare
CA264_18350 +0.8 4.5 hypothetical protein compare
CA264_15520 +0.8 4.2 hypothetical protein compare
CA264_09050 +0.8 4.6 hypothetical protein compare
CA264_13355 +0.8 4.1 ABC transporter permease compare
CA264_00190 +0.8 6.3 RagB/SusD family nutrient uptake outer membrane protein compare
CA264_21305 +0.8 1.2 hypothetical protein compare
CA264_09285 +0.8 4.1 anti-anti-sigma factor compare
CA264_20705 +0.8 5.9 N-acyl-L-amino acid amidohydrolase compare
CA264_14580 +0.8 3.3 hypothetical protein compare
CA264_20580 +0.8 2.5 tRNA (guanine(37)-N(1))-methyltransferase compare
CA264_20560 +0.8 4.0 DNA repair ATPase compare
CA264_17510 +0.8 3.9 pseudouridylate synthase compare
CA264_19135 +0.8 1.2 hypothetical protein compare
CA264_06590 +0.8 4.8 3-hydroxybutyryl-CoA dehydrogenase compare
CA264_05535 +0.8 4.9 hypothetical protein compare
CA264_18135 +0.7 4.0 ABC transporter ATP-binding protein compare
CA264_15880 +0.7 1.4 5-formyltetrahydrofolate cyclo-ligase compare
CA264_06250 +0.7 2.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
CA264_21225 +0.7 1.5 hypothetical protein compare
CA264_08870 +0.7 3.3 imidazolonepropionase compare
CA264_05635 +0.7 4.1 efflux transporter periplasmic adaptor subunit compare
CA264_08475 +0.7 1.9 hypothetical protein compare
CA264_14915 +0.7 4.0 MFS transporter compare
CA264_12175 +0.7 1.2 hypothetical protein compare
CA264_05070 +0.7 4.1 indole-3-glycerol phosphate synthase compare
CA264_01985 +0.7 1.3 tRNA-Lys compare
CA264_16145 +0.7 4.5 copper transporter compare
CA264_01820 +0.7 2.7 hypothetical protein compare
CA264_11940 +0.7 5.4 peptidase M23 compare
CA264_20120 +0.7 1.0 hypothetical protein compare
CA264_13470 +0.7 0.8 cysteine synthase A compare
CA264_10535 +0.7 1.8 cyclic pyranopterin monophosphate synthase MoaC compare
CA264_02945 +0.7 2.9 hypothetical protein compare
CA264_17790 +0.7 3.1 hypothetical protein compare
CA264_07735 +0.7 3.6 hypothetical protein compare
CA264_15290 +0.7 5.5 alpha/beta hydrolase compare
CA264_02055 +0.7 1.0 hypothetical protein compare
CA264_13165 +0.7 2.4 arylesterase compare
CA264_08145 +0.7 4.4 deoxyribodipyrimidine photo-lyase compare
CA264_17560 +0.7 4.7 hypothetical protein compare
CA264_04560 +0.7 4.7 histidine ammonia-lyase compare
CA264_15710 +0.7 4.8 hypothetical protein compare
CA264_16980 +0.7 2.7 thiol reductase thioredoxin compare
CA264_02160 +0.7 3.9 hypothetical protein compare
CA264_16835 +0.7 2.1 hypothetical protein compare
CA264_01815 +0.7 1.3 N-acetyltransferase compare
CA264_01950 +0.7 4.4 PhoH family protein compare
CA264_04370 +0.7 3.7 acyl transferase compare
CA264_03440 +0.7 3.7 DoxX family protein compare
CA264_08150 +0.7 5.5 radical SAM protein compare
CA264_07125 +0.7 2.8 6-carboxytetrahydropterin synthase QueD compare
CA264_15960 +0.7 3.8 hypothetical protein compare
CA264_04150 +0.6 1.9 hypothetical protein compare
CA264_06280 +0.6 4.8 sodium:solute symporter compare
CA264_15910 +0.6 3.9 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN compare
CA264_00170 +0.6 2.4 ATP:cob(I)alamin adenosyltransferase compare
CA264_17760 +0.6 4.3 leucine dehydrogenase compare
CA264_19320 +0.6 0.8 hypothetical protein compare
CA264_20555 +0.6 1.9 6-pyruvoyl tetrahydrobiopterin synthase compare
CA264_12960 +0.6 5.1 peptidase M13 compare
CA264_06090 +0.6 1.9 hypothetical protein compare
CA264_13645 +0.6 3.0 hypothetical protein compare
CA264_20625 +0.6 4.3 methylcrotonoyl-CoA carboxylase compare
CA264_05580 +0.6 4.1 hypothetical protein compare
CA264_15680 +0.6 3.2 hypothetical protein compare
CA264_12460 +0.6 4.5 aminotransferase DegT compare
CA264_15690 +0.6 2.6 hypothetical protein compare
CA264_11860 +0.6 3.6 hypothetical protein compare
CA264_05060 +0.6 2.5 glutamine amidotransferase compare
CA264_11050 +0.6 2.7 methylmalonyl-CoA epimerase compare
CA264_02255 +0.6 3.7 hypothetical protein compare
CA264_15840 +0.6 3.1 hypothetical protein compare
CA264_02130 +0.6 1.9 pseudouridine synthase compare
CA264_20715 +0.6 2.7 metallophosphatase compare
CA264_17780 +0.6 2.3 hypothetical protein compare
CA264_06545 +0.6 2.7 peptidase M48 Ste24p compare
CA264_21295 +0.6 1.1 hypothetical protein compare
CA264_20200 +0.6 4.1 hypothetical protein compare
CA264_15050 +0.6 5.0 3-hydroxyacyl-CoA dehydrogenase compare
CA264_05640 +0.6 4.4 transporter compare
CA264_03165 +0.6 4.0 acyl-CoA desaturase compare
CA264_17735 +0.6 4.0 antibiotic ABC transporter ATP-binding protein compare


Specific Phenotypes

For 22 genes in this experiment

For stress Carbenicillin disodium salt in Pontibacter actiniarum KMM 6156, DSM 19842

For stress Carbenicillin disodium salt across organisms